Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4388

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,845,408	-				+0.1
4,845,463	+				+1.5
4,845,510	+				+0.5
4,845,511	-				-0.5
4,845,541	-				-0.5
4,845,570	+				-2.3
4,845,571	-				+1.0
4,845,571	-				-1.0
4,845,956	-		Pf1N1B4_4387	0.44	+0.3
4,846,547	+		Pf1N1B4_4388	0.15	-1.0
4,846,547	+		Pf1N1B4_4388	0.15	-0.9
4,846,547	+		Pf1N1B4_4388	0.15	-1.7
4,846,548	-		Pf1N1B4_4388	0.15	-2.6
4,846,548	-		Pf1N1B4_4388	0.15	-2.6
4,846,548	-		Pf1N1B4_4388	0.15	-1.0
4,846,694	+		Pf1N1B4_4388	0.30	-2.5
4,846,695	-				-0.0
4,846,787	+		Pf1N1B4_4388	0.39	-2.0
4,846,787	+		Pf1N1B4_4388	0.39	-1.0
4,846,788	-		Pf1N1B4_4388	0.39	+2.3
4,847,240	+		Pf1N1B4_4388	0.83	+0.3
4,847,240	+		Pf1N1B4_4388	0.83	+1.0
4,847,406	+				-0.1
4,847,406	+				-0.5
4,847,406	+				+0.7
4,847,407	-				-0.6
4,847,407	-				-0.1
4,847,428	+				+1.3
4,847,428	+				-0.3
4,847,429	-				+0.5
4,847,429	-				+0.1
4,847,429	-				+0.3
4,847,584	+				-0.3
4,847,597	+				+0.5
4,847,597	+				+0.2
4,847,629	+				-1.0
4,847,658	+				-0.0
4,847,658	+				-0.1
4,847,658	+				-1.0
4,847,658	+				+0.5
4,847,658	+				-0.3
4,847,659	-				-1.0
4,847,659	-				-0.5
4,847,659	-				+0.5
4,847,929	-		Pf1N1B4_4389	0.16	-0.0
4,848,081	+		Pf1N1B4_4389	0.23	-0.2
4,848,081	+		Pf1N1B4_4389	0.23	-1.0
4,848,081	+		Pf1N1B4_4389	0.23	+0.1
4,848,081	+		Pf1N1B4_4389	0.23	-0.1
4,848,081	+		Pf1N1B4_4389	0.23	-0.5
4,848,081	+		Pf1N1B4_4389	0.23	+0.5
4,848,081	+		Pf1N1B4_4389	0.23	-1.5
4,848,221	+		Pf1N1B4_4389	0.30	+1.0
4,848,221	+		Pf1N1B4_4389	0.30	-2.3