Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4362

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,820,056	+		Pf1N1B4_4361	0.81	+0.8
4,820,057	-		Pf1N1B4_4361	0.81	+0.4
4,820,057	-		Pf1N1B4_4361	0.81	-0.4
4,820,057	-		Pf1N1B4_4361	0.81	+1.0
4,820,059	+		Pf1N1B4_4361	0.81	-1.3
4,820,059	+		Pf1N1B4_4361	0.81	+0.3
4,820,060	-		Pf1N1B4_4361	0.81	+0.1
4,820,060	-		Pf1N1B4_4361	0.81	-1.0
4,820,074	+		Pf1N1B4_4361	0.82	+0.3
4,820,075	-		Pf1N1B4_4361	0.82	-0.0
4,820,075	-		Pf1N1B4_4361	0.82	+0.1
4,820,098	+		Pf1N1B4_4361	0.83	-1.4
4,820,099	-		Pf1N1B4_4361	0.83	-0.6
4,820,251	+				-2.0
4,820,503	+				+0.6
4,820,504	-				-1.0
4,820,558	+				-1.8
4,820,561	+				-0.4
4,820,561	+				+1.4
4,820,561	+				+1.1
4,820,567	+				-0.4
4,820,622	+				-1.0
4,820,622	+				-2.0
4,820,655	+				+1.4
4,820,655	+				-0.6
4,820,821	-				+0.6
4,820,821	-				-0.2
4,820,937	+				+1.3
4,821,034	+				+0.6
4,821,211	+		Pf1N1B4_4362	0.27	-1.3
4,821,211	+		Pf1N1B4_4362	0.27	+0.6
4,821,212	-		Pf1N1B4_4362	0.27	-2.0
4,821,241	+		Pf1N1B4_4362	0.31	-2.4
4,821,241	+		Pf1N1B4_4362	0.31	-1.4
4,821,242	-				+0.6
4,821,327	+		Pf1N1B4_4362	0.44	-0.7
4,821,327	+		Pf1N1B4_4362	0.44	+1.1
4,821,327	+		Pf1N1B4_4362	0.44	-0.4
4,821,332	-		Pf1N1B4_4362	0.44	+0.4
4,821,564	-		Pf1N1B4_4362	0.77	-0.4
4,821,564	-		Pf1N1B4_4362	0.77	-0.7
4,821,673	+				-0.7
4,821,754	+				-0.4
4,821,754	+				+2.1
4,821,754	+				+0.6
4,821,755	-				+0.2
4,821,829	+		Pf1N1B4_4363	0.22	-0.2
4,821,829	+		Pf1N1B4_4363	0.22	-0.7
4,821,829	+		Pf1N1B4_4363	0.22	-1.2
4,821,829	+		Pf1N1B4_4363	0.22	+1.0
4,821,829	+		Pf1N1B4_4363	0.22	+0.6
4,821,829	+		Pf1N1B4_4363	0.22	-0.5
4,821,830	-		Pf1N1B4_4363	0.23	+0.3
4,821,830	-		Pf1N1B4_4363	0.23	-0.7
4,821,900	+		Pf1N1B4_4363	0.76	-0.5
4,821,900	+		Pf1N1B4_4363	0.76	-1.0
4,821,900	+		Pf1N1B4_4363	0.76	+0.9
4,821,901	-		Pf1N1B4_4363	0.77	-1.3
4,821,901	-		Pf1N1B4_4363	0.77	-1.4
4,821,901	-		Pf1N1B4_4363	0.77	+1.1
4,821,901	-		Pf1N1B4_4363	0.77	-0.5
4,821,954	-				-0.4
4,822,192	+				+1.1
4,822,193	-				-1.0
4,822,234	+				-0.2
4,822,235	-				-0.8
4,822,235	-				+0.6
4,822,235	-				-0.9
4,822,235	-				+0.6
4,822,235	-				-0.4
4,822,235	-				+1.2
4,822,249	+				-0.0
4,822,250	-				-1.8
4,822,310	-				+1.0
4,822,348	+				+2.4
4,822,348	+		Pf1N1B4_4364	0.14	+1.0
4,822,348	+		Pf1N1B4_4364	0.14	-0.4
4,822,398	-		Pf1N1B4_4364	0.18	-0.3
4,822,637	-		Pf1N1B4_4364	0.34	+0.4
4,822,678	+		Pf1N1B4_4364	0.37	-1.0
4,822,716	+		Pf1N1B4_4364	0.39	-2.2
4,822,717	-		Pf1N1B4_4364	0.39	+1.7
4,822,717	-		Pf1N1B4_4364	0.39	+0.4
4,822,717	-		Pf1N1B4_4364	0.39	-2.0