Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3997

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,440,948	-				+1.3
4,440,948	-				-0.3
4,440,958	+				-1.2
4,440,958	+				+0.7
4,440,958	+				-0.9
4,440,959	-				+1.5
4,440,959	-				+0.7
4,440,959	-				+0.2
4,441,071	+				+0.7
4,441,071	+				+0.4
4,441,071	+				+1.0
4,441,071	+				-0.5
4,441,072	-				-0.3
4,441,074	-				+0.4
4,441,074	-				-1.8
4,441,117	+				-0.3
4,441,240	+		Pf1N1B4_3996	0.12	-1.3
4,441,241	-				+0.7
4,441,633	-		Pf1N1B4_3996	0.72	-0.3
4,441,705	+		Pf1N1B4_3996	0.83	-1.9
4,441,705	+		Pf1N1B4_3996	0.83	+1.4
4,441,705	+		Pf1N1B4_3996	0.83	+0.1
4,441,706	-		Pf1N1B4_3996	0.84	-0.1
4,441,706	-		Pf1N1B4_3996	0.84	+1.3
4,441,706	-		Pf1N1B4_3996	0.84	+0.9
4,441,706	-		Pf1N1B4_3996	0.84	-0.9
4,441,706	-		Pf1N1B4_3996	0.84	+2.5
4,441,706	-		Pf1N1B4_3996	0.84	+0.7
4,441,706	-		Pf1N1B4_3996	0.84	+0.5
4,441,706	-		Pf1N1B4_3996	0.84	-1.3
4,441,706	-				+1.7
4,441,706	-		Pf1N1B4_3996	0.84	-1.3
4,441,706	-		Pf1N1B4_3996	0.84	-0.3
4,441,767	-				-1.1
4,441,794	-				-0.5
4,441,816	+				-0.9
4,441,842	+				-2.1
4,441,843	-				-0.9
4,441,843	-				+0.7
4,441,865	-				-0.3
4,441,865	-				-0.3
4,441,999	+				-2.3
4,441,999	+				-2.1
4,441,999	+				-0.3
4,441,999	+				-0.3
4,441,999	+				-0.3
4,441,999	+				-1.7
4,442,000	-				-2.9
4,442,000	-				-1.8
4,442,000	-				-0.2
4,442,000	-				-1.0
4,442,007	+				+0.1
4,442,007	+				-0.6
4,442,007	+				-2.1
4,442,007	+				-1.9
4,442,008	-				-2.3
4,442,285	+		Pf1N1B4_3997	0.24	-1.4
4,442,580	+		Pf1N1B4_3997	0.41	-1.6
4,442,817	+		Pf1N1B4_3997	0.54	-1.6
4,442,818	-		Pf1N1B4_3997	0.54	-1.3
4,443,052	-		Pf1N1B4_3997	0.68	-2.9
4,443,159	+		Pf1N1B4_3997	0.74	-1.9
4,443,160	-		Pf1N1B4_3997	0.74	-0.9
4,443,400	-		Pf1N1B4_3997	0.88	-2.0