Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3966

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,405,632	+				-0.3
4,405,632	+				-0.3
4,405,632	+				-0.3
4,405,632	+				-0.7
4,405,632	+				-1.6
4,405,632	+				-0.2
4,405,632	+				-0.9
4,405,633	-				-1.9
4,405,633	-				-0.5
4,405,914	+		Pf1N1B4_3965	0.35	-1.5
4,405,914	+		Pf1N1B4_3965	0.35	-1.0
4,405,914	+				+2.3
4,406,348	+				-0.6
4,406,349	-				+0.1
4,406,370	+				-1.0
4,406,787	+		Pf1N1B4_3966	0.22	+0.2
4,406,787	+		Pf1N1B4_3966	0.22	-2.3
4,407,102	+		Pf1N1B4_3966	0.46	-1.8
4,407,267	+		Pf1N1B4_3966	0.59	+1.3
4,407,268	-		Pf1N1B4_3966	0.59	+0.7
4,407,268	-		Pf1N1B4_3966	0.59	-1.2
4,408,151	+		Pf1N1B4_3967	0.11	-1.6
4,408,151	+		Pf1N1B4_3967	0.11	+1.0
4,408,151	+		Pf1N1B4_3967	0.11	+0.7
4,408,151	+		Pf1N1B4_3967	0.11	-0.1
4,408,152	-				+0.7
4,408,152	-				-1.9
4,408,262	+		Pf1N1B4_3967	0.21	+0.2
4,408,263	-		Pf1N1B4_3967	0.21	-0.6
4,408,436	+		Pf1N1B4_3967	0.37	-1.8