Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3942

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,376,672	+				+0.7
4,376,673	-				+0.8
4,376,854	+				-3.4
4,376,854	+				-1.4
4,376,855	-				+0.9
4,376,855	-				-1.1
4,376,895	+				-1.9
4,376,940	+				-1.4
4,376,940	+				-1.3
4,376,940	+				-0.0
4,376,940	+				-1.6
4,376,940	+				-0.1
4,376,940	+				-0.5
4,376,941	-				-1.3
4,376,941	-				-0.6
4,376,941	-				+2.7
4,376,941	-				+0.9
4,377,220	+				+1.0
4,377,221	-				-0.0
4,377,277	+				-0.9
4,377,277	+				+0.4
4,377,277	+				-1.3
4,377,277	+				-0.6
4,377,278	-				+0.0
4,377,278	-				-0.7
4,377,278	-				+0.3
4,377,278	-				+0.9
4,377,278	-				-0.3
4,377,278	-				+0.2
4,377,278	-				+3.5
4,377,362	-				-0.3
4,377,362	-		Pf1N1B4_3942	0.15	-1.6
4,377,362	-		Pf1N1B4_3942	0.15	-0.8
4,377,482	+		Pf1N1B4_3942	0.28	-0.6
4,377,526	+		Pf1N1B4_3942	0.33	+1.3
4,377,526	+		Pf1N1B4_3942	0.33	-1.9
4,377,526	+		Pf1N1B4_3942	0.33	-0.6
4,377,526	+		Pf1N1B4_3942	0.33	-1.3
4,377,527	-		Pf1N1B4_3942	0.33	-0.5
4,377,527	-				-0.9
4,377,733	+		Pf1N1B4_3942	0.55	+0.4
4,377,919	-		Pf1N1B4_3942	0.75	-0.6
4,377,988	+				+0.7
4,377,988	+		Pf1N1B4_3942	0.82	-1.6
4,377,988	+		Pf1N1B4_3942	0.82	-2.1
4,377,988	+		Pf1N1B4_3942	0.82	-0.3
4,378,184	+				-0.3
4,378,185	-				+0.7
4,378,228	-				+0.4
4,378,228	-				-1.9
4,378,233	+				-0.9
4,378,234	-				+0.3
4,378,292	+				-1.3
4,378,293	-				-0.5