Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3783

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,191,444	+				+0.8
4,191,444	+				+0.0
4,191,444	+				-1.1
4,191,444	+				+1.5
4,191,444	+				-0.3
4,191,444	+				-0.7
4,191,444	+				+2.1
4,191,444	+				-0.2
4,191,444	+				+0.8
4,191,445	-				-2.4
4,191,445	-				-0.2
4,191,445	-				-0.8
4,191,445	-				-2.0
4,191,445	-				+1.1
4,191,445	-				-0.0
4,191,445	-				-0.0
4,191,445	-				-1.2
4,191,572	+				-1.2
4,191,597	-				-0.5
4,191,666	+				+1.6
4,191,666	+				+0.8
4,191,936	+		Pf1N1B4_3782	0.57	-1.5
4,191,937	-		Pf1N1B4_3782	0.57	-0.4
4,191,986	+		Pf1N1B4_3782	0.66	-1.8
4,191,986	+		Pf1N1B4_3782	0.66	-1.2
4,191,986	+				-1.6
4,191,987	-		Pf1N1B4_3782	0.66	+0.4
4,192,120	+				+0.4
4,192,120	+				+0.5
4,192,121	-				-0.8
4,192,174	-				+1.1
4,192,174	-				-0.6
4,192,207	+				-1.6
4,192,208	-				-1.0
4,192,208	-				+1.5
4,192,216	+				-0.2
4,192,217	-				+2.2
4,192,217	-				-0.8
4,192,217	-				-0.1
4,192,217	-				+0.2
4,192,217	-				+1.2
4,192,217	-				+1.4
4,192,224	-				+0.1
4,192,309	+				+2.6
4,192,309	+				-0.8
4,192,309	+				-1.0
4,192,309	+				-0.2
4,192,309	+				+0.4
4,192,309	+				-0.8
4,192,309	+				-0.2
4,192,378	+				+0.0
4,192,379	-				-2.0
4,192,387	+				+0.8
4,192,388	-				-0.0
4,192,388	-				-0.1
4,192,388	-				-0.2
4,192,388	-				+1.8
4,192,388	-				+0.2
4,192,391	+				-1.2
4,192,391	+				+0.8
4,192,392	-				+1.4
4,192,392	-				-0.2
4,192,394	-				+0.3
4,192,394	-				-0.2
4,192,394	-				-1.2
4,192,394	-				+0.1
4,192,420	+				-0.8
4,192,420	+				-0.2
4,192,420	+				+0.1
4,192,420	+				+2.8
4,192,420	+				-0.8
4,192,420	+				-0.6
4,192,421	-				-1.5
4,192,504	-		Pf1N1B4_3783	0.35	-0.8
4,192,504	-		Pf1N1B4_3783	0.35	-0.9
4,192,553	-		Pf1N1B4_3783	0.52	+1.1
4,192,653	+		Pf1N1B4_3783	0.88	-1.1
4,192,962	+				+0.1
4,192,962	+				+1.9
4,192,984	+				-1.2
4,192,984	+				-2.1
4,192,985	-				-1.2
4,193,245	+		Pf1N1B4_3784	0.11	-1.2
4,193,253	+		Pf1N1B4_3784	0.12	+1.0
4,193,253	+		Pf1N1B4_3784	0.12	+1.2
4,193,254	-		Pf1N1B4_3784	0.12	-0.4
4,193,415	-		Pf1N1B4_3784	0.20	+1.0
4,193,504	+		Pf1N1B4_3784	0.25	-1.6
4,193,505	-		Pf1N1B4_3784	0.25	-2.2