Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3726

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,133,441	+		Pf1N1B4_3725	0.63	+0.6
4,133,581	+		Pf1N1B4_3725	0.69	+0.9
4,133,806	-		Pf1N1B4_3725	0.80	+2.4
4,133,888	-		Pf1N1B4_3725	0.84	-0.3
4,133,967	+		Pf1N1B4_3725	0.88	-2.4
4,133,967	+		Pf1N1B4_3725	0.88	-0.8
4,133,967	+		Pf1N1B4_3725	0.88	-0.0
4,133,967	+		Pf1N1B4_3725	0.88	+0.4
4,133,968	-		Pf1N1B4_3725	0.88	+0.1
4,134,232	+				-1.5
4,134,232	+				+2.2
4,134,232	+				+0.5
4,134,233	-				-0.5
4,134,233	-				+0.8
4,134,233	-				+1.8
4,134,233	-				+1.6
4,134,298	-				-1.8
4,134,491	-		Pf1N1B4_3726	0.18	-0.8
4,134,566	-		Pf1N1B4_3726	0.23	-0.5
4,134,732	+		Pf1N1B4_3726	0.36	+0.2
4,134,794	+		Pf1N1B4_3726	0.40	-0.5
4,134,794	+		Pf1N1B4_3726	0.40	+0.0
4,134,794	+		Pf1N1B4_3726	0.40	-0.2
4,134,795	-		Pf1N1B4_3726	0.40	+1.6
4,134,943	-		Pf1N1B4_3726	0.51	-0.1
4,134,943	-		Pf1N1B4_3726	0.51	-2.0
4,135,200	+		Pf1N1B4_3726	0.71	-0.4
4,135,200	+		Pf1N1B4_3726	0.71	-0.0
4,135,200	+		Pf1N1B4_3726	0.71	-0.2
4,135,201	-		Pf1N1B4_3726	0.71	-0.8
4,135,374	+		Pf1N1B4_3726	0.84	-0.0
4,135,374	+		Pf1N1B4_3726	0.84	+0.8
4,135,468	-				+0.4
4,135,468	-				-0.4
4,135,468	-				-0.2
4,135,519	-				-1.8
4,135,546	+				+0.2
4,135,547	-				+0.8
4,135,548	+				+0.2
4,135,548	+				-1.2
4,135,548	+				-0.5
4,135,548	+				+0.8
4,135,548	+				-0.5
4,135,548	+				-0.4
4,135,548	+				+1.1
4,135,548	+				+0.8
4,135,548	+				-2.0
4,135,548	+				-2.7
4,135,549	-				+1.1
4,135,549	-				+0.5
4,135,549	-				-0.8
4,135,549	-				-0.1
4,135,549	-				-0.2
4,135,549	-				-2.0
4,135,549	-				-2.0
4,135,549	-				+1.1
4,135,659	+				+0.8
4,135,659	+				-0.8
4,135,660	-				-1.2
4,135,660	-				+1.4
4,135,660	-				-1.8
4,135,789	+				+0.2
4,135,789	+				-0.8
4,135,790	-				+0.8
4,135,844	-				-1.2
4,135,860	-				-0.6
4,135,965	+				-0.2
4,136,122	+		Pf1N1B4_3727	0.10	+2.6
4,136,122	+				+0.8
4,136,122	+		Pf1N1B4_3727	0.10	-0.4
4,136,122	+		Pf1N1B4_3727	0.10	+0.4
4,136,122	+		Pf1N1B4_3727	0.10	-2.4
4,136,123	-		Pf1N1B4_3727	0.10	-1.2
4,136,123	-		Pf1N1B4_3727	0.10	+0.8
4,136,216	+		Pf1N1B4_3727	0.18	-0.0
4,136,216	+		Pf1N1B4_3727	0.18	-3.4
4,136,232	+		Pf1N1B4_3727	0.20	-2.4
4,136,232	+		Pf1N1B4_3727	0.20	-0.8
4,136,232	+		Pf1N1B4_3727	0.20	+0.8
4,136,232	+		Pf1N1B4_3727	0.20	-1.5
4,136,232	+		Pf1N1B4_3727	0.20	-0.4
4,136,232	+		Pf1N1B4_3727	0.20	-1.5
4,136,232	+		Pf1N1B4_3727	0.20	-2.0
4,136,232	+				+0.8
4,136,232	+		Pf1N1B4_3727	0.20	+1.6
4,136,232	+		Pf1N1B4_3727	0.20	-0.2
4,136,233	-		Pf1N1B4_3727	0.20	-1.5
4,136,233	-		Pf1N1B4_3727	0.20	-2.2
4,136,233	-		Pf1N1B4_3727	0.20	-1.7
4,136,233	-		Pf1N1B4_3727	0.20	+0.6
4,136,233	-		Pf1N1B4_3727	0.20	+0.4
4,136,233	-		Pf1N1B4_3727	0.20	+0.9
4,136,233	-		Pf1N1B4_3727	0.20	-0.3
4,136,233	-		Pf1N1B4_3727	0.20	+0.5
4,136,233	-		Pf1N1B4_3727	0.20	-0.1
4,136,443	+		Pf1N1B4_3727	0.38	-1.5
4,136,454	+		Pf1N1B4_3727	0.39	+1.8
4,136,455	-		Pf1N1B4_3727	0.39	+0.8
4,136,455	-		Pf1N1B4_3727	0.39	+0.6