Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3627

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
4,034,196	+		Pf1N1B4_3625	0.88	-1.5
4,034,279	+				-0.8
4,034,279	+				+1.2
4,034,279	+				-0.5
4,034,279	+				+2.1
4,034,279	+				-0.4
4,034,280	-				-2.8
4,034,296	-				-0.5
4,034,296	-				+0.8
4,034,296	-				+1.8
4,034,304	+				+2.8
4,034,305	-				-1.2
4,034,305	-				+1.2
4,034,376	+		Pf1N1B4_3626	0.13	-0.2
4,034,455	+		Pf1N1B4_3626	0.24	+0.5
4,034,455	+		Pf1N1B4_3626	0.24	+0.8
4,034,455	+		Pf1N1B4_3626	0.24	+0.5
4,034,455	+		Pf1N1B4_3626	0.24	+0.3
4,034,456	-		Pf1N1B4_3626	0.24	+0.5
4,034,456	-		Pf1N1B4_3626	0.24	-2.2
4,034,456	-		Pf1N1B4_3626	0.24	+0.8
4,034,500	-		Pf1N1B4_3626	0.30	-1.0
4,034,618	+		Pf1N1B4_3626	0.46	+1.3
4,034,682	+		Pf1N1B4_3626	0.54	-0.2
4,034,889	+		Pf1N1B4_3626	0.82	-1.6
4,034,890	-		Pf1N1B4_3626	0.82	-1.0
4,034,892	+		Pf1N1B4_3626	0.83	+0.1
4,034,962	+				+0.2
4,035,088	+				-0.2
4,035,088	+				-0.8
4,035,088	+				+0.6
4,035,089	-				+0.6
4,035,095	+				+1.1
4,035,095	+				+0.5
4,035,095	+				-0.2
4,035,095	+				+0.2
4,035,095	+				-2.1
4,035,188	+				-0.4
4,035,188	+				-0.5
4,035,189	-				+1.4
4,035,235	+				+0.5
4,035,489	+		Pf1N1B4_3627	0.81	-0.1
4,035,489	+		Pf1N1B4_3627	0.81	+0.0
4,035,489	+		Pf1N1B4_3627	0.81	+0.1
4,035,489	+		Pf1N1B4_3627	0.81	-2.2
4,035,591	-				-0.8
4,035,591	-				+0.6
4,035,739	-		Pf1N1B4_3628	0.19	-0.4
4,035,861	+		Pf1N1B4_3628	0.34	-0.2
4,035,862	-		Pf1N1B4_3628	0.34	-0.2
4,036,378	-				-1.2
4,036,385	+				-0.8
4,036,386	-				+0.3
4,036,410	+				-0.5
4,036,411	-				+0.1
4,036,411	-				+1.1
4,036,434	-				+0.8