Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3577

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
3,987,205	+		Pf1N1B4_3576	0.82	+0.8
3,987,206	-		Pf1N1B4_3576	0.82	-0.2
3,987,206	-		Pf1N1B4_3576	0.82	+0.8
3,987,238	+		Pf1N1B4_3576	0.83	-2.0
3,987,238	+		Pf1N1B4_3576	0.83	-0.4
3,987,238	+		Pf1N1B4_3576	0.83	-0.2
3,987,238	+		Pf1N1B4_3576	0.83	-1.7
3,987,238	+		Pf1N1B4_3576	0.83	-1.5
3,987,238	+				-1.5
3,987,238	+		Pf1N1B4_3576	0.83	-1.2
3,987,238	+		Pf1N1B4_3576	0.83	-0.3
3,987,238	+		Pf1N1B4_3576	0.83	+0.8
3,987,239	-		Pf1N1B4_3576	0.83	-0.6
3,987,239	-		Pf1N1B4_3576	0.83	+0.3
3,987,259	+		Pf1N1B4_3576	0.84	-0.7
3,987,340	+		Pf1N1B4_3576	0.86	-1.7
3,987,340	+		Pf1N1B4_3576	0.86	-1.5
3,987,340	+				-1.5
3,987,340	+				-1.2
3,987,340	+		Pf1N1B4_3576	0.86	-1.2
3,987,340	+		Pf1N1B4_3576	0.86	-0.0
3,987,340	+		Pf1N1B4_3576	0.86	+1.8
3,987,340	+		Pf1N1B4_3576	0.86	-1.2
3,987,341	-				+2.4
3,987,400	+		Pf1N1B4_3576	0.88	+0.1
3,987,401	-		Pf1N1B4_3576	0.88	-0.3
3,987,401	-		Pf1N1B4_3576	0.88	+0.8
3,987,574	-				-0.4
3,987,574	-				+1.3
3,987,577	+				-0.9
3,987,577	+				-0.7
3,987,577	+				-0.2
3,987,577	+				+1.8
3,987,577	+				-1.2
3,987,577	+				+1.0
3,987,577	+				-0.0
3,987,577	+				-0.6
3,987,577	+				-1.2
3,987,578	-				-1.0
3,987,578	-				-0.2
3,987,652	+				-0.7
3,987,652	+				-0.4
3,987,652	+				+1.3
3,987,652	+				-1.2
3,987,700	+				+1.8
3,987,700	+				-0.1
3,987,700	+				-1.2
3,987,700	+				+0.4
3,987,721	-				-2.3
3,987,750	-				+1.3
3,987,971	+				-0.2
3,987,972	-				-1.2
3,987,972	-				-0.0
3,988,016	-				+0.6
3,988,024	-				-0.2
3,988,103	+				+1.7
3,988,104	-				-0.2
3,988,153	-				-0.2
3,988,263	-		Pf1N1B4_3577	0.16	-1.5
3,988,305	-		Pf1N1B4_3577	0.21	+0.4
3,988,305	-		Pf1N1B4_3577	0.21	-1.7
3,988,340	+		Pf1N1B4_3577	0.26	+0.6
3,988,341	-		Pf1N1B4_3577	0.26	+1.0
3,988,341	-		Pf1N1B4_3577	0.26	-0.3
3,988,395	+		Pf1N1B4_3577	0.33	+0.8
3,988,396	-		Pf1N1B4_3577	0.33	+0.3
3,988,396	-		Pf1N1B4_3577	0.33	+2.4
3,988,396	-		Pf1N1B4_3577	0.33	+0.8
3,988,396	-		Pf1N1B4_3577	0.33	-1.7
3,988,407	-				+1.8
3,988,407	-		Pf1N1B4_3577	0.34	-1.0
3,988,407	-		Pf1N1B4_3577	0.34	-1.2
3,988,520	+		Pf1N1B4_3577	0.49	-1.5
3,988,521	-		Pf1N1B4_3577	0.49	-2.3
3,988,565	+		Pf1N1B4_3577	0.55	+0.1
3,988,736	+		Pf1N1B4_3577	0.77	-1.2
3,988,736	+		Pf1N1B4_3577	0.77	+0.5
3,988,737	-				+0.3
3,988,737	-		Pf1N1B4_3577	0.77	-1.2
3,989,124	-		Pf1N1B4_3578	0.21	-0.4
3,989,219	-		Pf1N1B4_3578	0.30	-0.7
3,989,378	-		Pf1N1B4_3578	0.44	+0.8
3,989,420	-		Pf1N1B4_3578	0.48	-2.2
3,989,450	-		Pf1N1B4_3578	0.51	+2.1
3,989,576	+		Pf1N1B4_3578	0.63	-0.9
3,989,577	-		Pf1N1B4_3578	0.63	-0.7
3,989,595	-		Pf1N1B4_3578	0.64	-1.2