Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3462

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
3,866,906	-		Pf1N1B4_3460	0.85	+1.1
3,866,912	+		Pf1N1B4_3460	0.85	+2.2
3,867,122	+				+0.5
3,867,122	+				+2.2
3,867,123	-				-0.5
3,867,123	-				+0.3
3,867,123	-				-0.1
3,867,243	+				+0.1
3,867,243	+				-0.7
3,867,243	+				-0.1
3,867,244	-				-2.1
3,867,244	-				-0.7
3,867,244	-				-0.1
3,867,244	-				-1.5
3,867,409	+				-1.6
3,867,409	+				+2.9
3,867,410	-				-1.0
3,867,410	-				-0.5
3,867,527	+				+0.3
3,867,527	+				+0.1
3,867,528	-				+0.9
3,867,528	-				+0.7
3,867,551	-				+1.4
3,867,551	-				-1.1
3,867,551	-				+1.7
3,867,575	-				-0.1
3,867,577	-				-0.7
3,867,577	-				+1.3
3,867,577	-				+0.5
3,867,628	-				+0.6
3,867,642	+				-0.1
3,867,642	+				-1.7
3,867,642	+				+0.9
3,867,653	-				-1.5
3,867,654	+				-0.9
3,867,654	+				-0.1
3,867,861	+				+0.9
3,867,862	-		Pf1N1B4_3461	0.51	-0.0
3,867,862	-		Pf1N1B4_3461	0.51	-0.1
3,867,885	+		Pf1N1B4_3461	0.70	+1.3
3,867,886	-		Pf1N1B4_3461	0.71	-2.5
3,868,233	+		Pf1N1B4_3462	0.20	+1.9
3,868,234	-		Pf1N1B4_3462	0.20	-0.7
3,868,295	+		Pf1N1B4_3462	0.24	-2.8
3,868,295	+		Pf1N1B4_3462	0.24	-0.5
3,868,295	+		Pf1N1B4_3462	0.24	-0.7
3,868,295	+		Pf1N1B4_3462	0.24	-0.4
3,868,296	-		Pf1N1B4_3462	0.24	+1.4
3,868,533	-		Pf1N1B4_3462	0.39	-0.2
3,868,566	+				+1.9
3,868,567	-		Pf1N1B4_3462	0.41	+0.5
3,868,567	-		Pf1N1B4_3462	0.41	-0.7
3,869,157	+		Pf1N1B4_3462	0.78	+0.5
3,869,157	+		Pf1N1B4_3462	0.78	+0.2
3,869,157	+		Pf1N1B4_3462	0.78	-0.9
3,869,157	+		Pf1N1B4_3462	0.78	+0.1
3,869,268	+		Pf1N1B4_3462	0.85	-1.5
3,869,268	+		Pf1N1B4_3462	0.85	-2.6
3,869,269	-		Pf1N1B4_3462	0.85	+0.6
3,869,269	-		Pf1N1B4_3462	0.85	-0.1
3,869,302	+		Pf1N1B4_3462	0.87	-2.5
3,869,303	-		Pf1N1B4_3462	0.87	-0.6
3,869,303	-		Pf1N1B4_3462	0.87	+0.9
3,869,303	-		Pf1N1B4_3462	0.87	+2.9
3,869,342	+		Pf1N1B4_3462	0.89	+0.9
3,869,714	+		Pf1N1B4_3463	0.30	+0.5
3,869,834	+		Pf1N1B4_3463	0.47	-0.2
3,869,834	+		Pf1N1B4_3463	0.47	-0.1
3,869,834	+		Pf1N1B4_3463	0.47	-1.7
3,869,834	+		Pf1N1B4_3463	0.47	-0.1
3,869,834	+		Pf1N1B4_3463	0.47	-1.7
3,869,835	-		Pf1N1B4_3463	0.47	-0.4
3,869,835	-		Pf1N1B4_3463	0.47	-0.9
3,869,835	-		Pf1N1B4_3463	0.47	+0.9
3,869,835	-		Pf1N1B4_3463	0.47	+0.9
3,869,835	-		Pf1N1B4_3463	0.47	-0.9
3,869,893	-		Pf1N1B4_3463	0.56	-1.3
3,870,038	+		Pf1N1B4_3463	0.77	-0.3
3,870,039	-		Pf1N1B4_3463	0.77	-1.1
3,870,086	+		Pf1N1B4_3463	0.84	-0.9
3,870,188	+				+0.1
3,870,188	+				-1.0
3,870,189	-				+0.4
3,870,189	-				+1.9
3,870,189	-				-1.1
3,870,189	-				+1.4
3,870,243	+				+1.7
3,870,330	+				+0.4
3,870,330	+				-0.7
3,870,331	-				-2.1
3,870,360	+				+0.4
3,870,361	-				+0.9