Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3329

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
3,716,899	-				-0.1
3,716,899	-				+0.3
3,716,899	-				-1.2
3,716,930	+				+0.9
3,716,935	+				+0.9
3,716,981	+				+1.2
3,717,077	+		Pf1N1B4_3328	0.45	+0.5
3,717,147	+		Pf1N1B4_3328	0.75	+0.6
3,717,147	+		Pf1N1B4_3328	0.75	+2.2
3,717,147	+		Pf1N1B4_3328	0.75	+1.1
3,717,227	+				-3.1
3,717,227	+				-1.4
3,717,234	+				-0.1
3,717,234	+				-0.5
3,717,272	+				-0.7
3,717,325	+				-0.7
3,717,491	-		Pf1N1B4_3329	0.24	+0.3
3,717,731	+		Pf1N1B4_3329	0.46	-2.3
3,717,731	+				+0.9
3,717,732	-		Pf1N1B4_3329	0.46	+0.2
3,717,732	-		Pf1N1B4_3329	0.46	-0.9
3,717,806	+				-0.1
3,717,872	+		Pf1N1B4_3329	0.59	-0.5
3,717,872	+		Pf1N1B4_3329	0.59	-1.3
3,717,872	+		Pf1N1B4_3329	0.59	-1.4
3,717,872	+		Pf1N1B4_3329	0.59	-0.3
3,717,872	+		Pf1N1B4_3329	0.59	+0.5
3,717,872	+		Pf1N1B4_3329	0.59	+0.9
3,717,872	+		Pf1N1B4_3329	0.59	-1.4
3,717,872	+		Pf1N1B4_3329	0.59	-0.3
3,717,872	+		Pf1N1B4_3329	0.59	+0.1
3,717,872	+		Pf1N1B4_3329	0.59	-2.1
3,717,873	-		Pf1N1B4_3329	0.59	-0.7
3,717,873	-		Pf1N1B4_3329	0.59	+0.5
3,717,874	+		Pf1N1B4_3329	0.59	-0.1
3,717,874	+		Pf1N1B4_3329	0.59	-1.4
3,717,875	-		Pf1N1B4_3329	0.59	+0.3
3,717,875	-		Pf1N1B4_3329	0.59	-0.7
3,717,920	+		Pf1N1B4_3329	0.64	-2.6
3,717,920	+		Pf1N1B4_3329	0.64	-1.7
3,717,920	+				+0.9
3,717,920	+				+0.9
3,717,920	+		Pf1N1B4_3329	0.64	+0.3
3,717,920	+		Pf1N1B4_3329	0.64	-2.3
3,717,920	+		Pf1N1B4_3329	0.64	-0.8
3,717,920	+		Pf1N1B4_3329	0.64	-1.3
3,717,950	+		Pf1N1B4_3329	0.66	-0.7
3,717,950	+		Pf1N1B4_3329	0.66	-0.9
3,717,951	-		Pf1N1B4_3329	0.66	-2.3
3,718,076	+		Pf1N1B4_3329	0.78	+0.8
3,718,076	+		Pf1N1B4_3329	0.78	-1.3
3,718,221	+				-0.7
3,718,307	+				-1.1
3,718,307	+				-1.4
3,718,352	-				-0.7
3,718,375	-				+2.2
3,718,375	-				+1.6
3,718,552	+		Pf1N1B4_3330	0.27	-0.1
3,718,552	+		Pf1N1B4_3330	0.27	+0.3
3,718,552	+		Pf1N1B4_3330	0.27	+0.3
3,718,552	+		Pf1N1B4_3330	0.27	-1.9
3,718,553	-		Pf1N1B4_3330	0.28	-0.1
3,718,553	-		Pf1N1B4_3330	0.28	-1.2
3,718,553	-		Pf1N1B4_3330	0.28	-0.8
3,718,706	+		Pf1N1B4_3330	0.60	-0.7
3,718,719	-		Pf1N1B4_3330	0.63	-0.4
3,718,787	-		Pf1N1B4_3330	0.77	-1.9
3,718,792	+		Pf1N1B4_3330	0.78	-1.1
3,718,792	+		Pf1N1B4_3330	0.78	+3.5
3,718,792	+		Pf1N1B4_3330	0.78	-1.9
3,718,792	+		Pf1N1B4_3330	0.78	+1.9
3,718,793	-				-1.4
3,718,793	-		Pf1N1B4_3330	0.78	+0.3
3,718,793	-		Pf1N1B4_3330	0.78	+0.1
3,718,793	-				+1.5
3,718,793	-		Pf1N1B4_3330	0.78	-0.7
3,718,793	-		Pf1N1B4_3330	0.78	-0.3
3,718,793	-		Pf1N1B4_3330	0.78	-0.4
3,718,907	+				-0.1
3,718,907	+				-1.7
3,718,908	-				-0.7
3,718,908	-				+0.9
3,718,908	-				-0.7
3,719,069	+		Pf1N1B4_3331	0.29	-0.1
3,719,069	+		Pf1N1B4_3331	0.29	+0.3
3,719,070	-		Pf1N1B4_3331	0.29	-1.1
3,719,070	-		Pf1N1B4_3331	0.29	-2.1
3,719,070	-		Pf1N1B4_3331	0.29	+1.2
3,719,165	+		Pf1N1B4_3331	0.46	+1.3
3,719,166	-		Pf1N1B4_3331	0.46	+0.1
3,719,166	-		Pf1N1B4_3331	0.46	+1.6
3,719,166	-		Pf1N1B4_3331	0.46	-1.4
3,719,174	+		Pf1N1B4_3331	0.48	-1.4
3,719,175	-				+0.3