Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3312

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
3,700,617	+		Pf1N1B4_3311	0.43	-0.4
3,700,618	-		Pf1N1B4_3311	0.43	-1.9
3,700,618	-		Pf1N1B4_3311	0.43	-0.7
3,700,618	-		Pf1N1B4_3311	0.43	+0.6
3,700,634	+				-1.1
3,700,634	+		Pf1N1B4_3311	0.44	+0.3
3,700,635	-		Pf1N1B4_3311	0.44	+0.2
3,700,696	+		Pf1N1B4_3311	0.49	+0.2
3,700,881	+		Pf1N1B4_3311	0.61	-1.1
3,700,882	-		Pf1N1B4_3311	0.61	-0.4
3,700,898	+		Pf1N1B4_3311	0.62	-0.1
3,700,898	+		Pf1N1B4_3311	0.62	-1.3
3,700,899	-		Pf1N1B4_3311	0.62	-2.9
3,701,031	-		Pf1N1B4_3311	0.71	+0.1
3,701,031	-		Pf1N1B4_3311	0.71	+0.9
3,701,198	-		Pf1N1B4_3311	0.82	-0.1
3,701,253	-		Pf1N1B4_3311	0.85	+0.6
3,701,268	-		Pf1N1B4_3311	0.86	-3.0
3,701,268	-		Pf1N1B4_3311	0.86	-2.2
3,701,459	+				-2.1
3,701,460	-				-0.6
3,701,469	+				-0.1
3,701,469	+				+1.2
3,701,470	-				+0.7
3,701,475	+				-0.9
3,701,545	-		Pf1N1B4_3312	0.15	-1.0
3,701,578	+		Pf1N1B4_3312	0.22	-0.7
3,701,602	-		Pf1N1B4_3312	0.27	-0.5
3,701,778	+		Pf1N1B4_3312	0.66	-0.4
3,701,779	-		Pf1N1B4_3312	0.66	-0.2
3,701,779	-		Pf1N1B4_3312	0.66	+0.1
3,701,779	-		Pf1N1B4_3312	0.66	+0.2
3,701,779	-				+2.5
3,701,779	-		Pf1N1B4_3312	0.66	-0.7
3,701,779	-		Pf1N1B4_3312	0.66	-2.1
3,701,810	+		Pf1N1B4_3312	0.73	-0.4
3,701,927	+				+0.1
3,701,927	+				-0.7
3,701,927	+				+1.2
3,701,927	+				+0.9
3,701,927	+				-0.1
3,701,927	+				-0.3
3,701,927	+				+0.2
3,701,927	+				-0.9
3,701,927	+				+1.9
3,701,927	+				-1.1
3,701,928	-				-0.4
3,701,928	-				+0.9
3,701,928	-				-0.7
3,701,928	-				-0.4
3,701,928	-				+0.0
3,701,928	-				-0.7
3,701,928	-				+1.9
3,702,031	+				-2.7
3,702,031	+				-1.1
3,702,032	-				+0.2
3,702,055	+				-1.1
3,702,055	+				-0.4
3,702,055	+				-0.8
3,702,055	+				-1.1
3,702,055	+				-0.7
3,702,056	-				+0.5
3,702,056	-				-0.5
3,702,056	-				+0.1
3,702,056	-				-1.7
3,702,056	-				-2.1
3,702,169	+		Pf1N1B4_3313	0.18	-0.2
3,702,199	+		Pf1N1B4_3313	0.21	+0.9
3,702,199	+		Pf1N1B4_3313	0.21	-0.5
3,702,200	-		Pf1N1B4_3313	0.21	-0.1
3,702,232	+		Pf1N1B4_3313	0.24	+0.3
3,702,425	-		Pf1N1B4_3313	0.44	+0.8
3,702,425	-		Pf1N1B4_3313	0.44	-0.5
3,702,425	-		Pf1N1B4_3313	0.44	+0.5
3,702,425	-		Pf1N1B4_3313	0.44	-0.3
3,702,572	-		Pf1N1B4_3313	0.59	-0.7
3,702,572	-		Pf1N1B4_3313	0.59	-2.1
3,702,604	+		Pf1N1B4_3313	0.62	-1.3
3,702,605	-		Pf1N1B4_3313	0.62	-0.8
3,702,605	-		Pf1N1B4_3313	0.62	+1.9
3,702,749	-		Pf1N1B4_3313	0.77	-0.1
3,702,778	+		Pf1N1B4_3313	0.80	-1.4
3,702,778	+		Pf1N1B4_3313	0.80	+1.3
3,702,778	+		Pf1N1B4_3313	0.80	-1.4
3,702,778	+				-0.7
3,702,778	+		Pf1N1B4_3313	0.80	-0.6
3,702,779	-		Pf1N1B4_3313	0.80	+1.5
3,702,779	-		Pf1N1B4_3313	0.80	+0.9
3,702,779	-		Pf1N1B4_3313	0.80	-2.8
3,702,779	-		Pf1N1B4_3313	0.80	-0.6
3,702,779	-		Pf1N1B4_3313	0.80	-0.7
3,702,779	-		Pf1N1B4_3313	0.80	-1.7