Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3211

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
3,593,062	+		Pf1N1B4_3209	0.84	-1.5
3,593,063	-		Pf1N1B4_3209	0.84	-1.0
3,593,063	-		Pf1N1B4_3209	0.84	-0.2
3,593,073	+		Pf1N1B4_3209	0.86	-0.3
3,593,073	+		Pf1N1B4_3209	0.86	+1.0
3,593,255	-				-1.2
3,593,315	+		Pf1N1B4_3210	0.16	-2.2
3,593,315	+		Pf1N1B4_3210	0.16	+0.2
3,593,388	+		Pf1N1B4_3210	0.24	-1.8
3,593,389	-		Pf1N1B4_3210	0.25	+0.4
3,593,389	-		Pf1N1B4_3210	0.25	+0.0
3,593,451	-		Pf1N1B4_3210	0.32	-0.3
3,593,451	-		Pf1N1B4_3210	0.32	-1.5
3,593,489	+		Pf1N1B4_3210	0.36	-1.3
3,593,490	-		Pf1N1B4_3210	0.36	+3.0
3,593,490	-		Pf1N1B4_3210	0.36	-1.3
3,593,490	-		Pf1N1B4_3210	0.36	+2.3
3,593,490	-		Pf1N1B4_3210	0.36	-0.8
3,593,588	+		Pf1N1B4_3210	0.48	+1.4
3,593,588	+		Pf1N1B4_3210	0.48	-0.7
3,593,589	-		Pf1N1B4_3210	0.48	+1.0
3,593,589	-		Pf1N1B4_3210	0.48	+0.0
3,593,589	-		Pf1N1B4_3210	0.48	+0.2
3,593,646	+		Pf1N1B4_3210	0.55	-0.0
3,593,647	-		Pf1N1B4_3210	0.55	+0.6
3,593,682	-		Pf1N1B4_3210	0.59	+0.0
3,593,826	+		Pf1N1B4_3210	0.76	-0.1
3,593,826	+		Pf1N1B4_3210	0.76	-1.2
3,593,826	+		Pf1N1B4_3210	0.76	-0.5
3,593,826	+		Pf1N1B4_3210	0.76	-1.0
3,593,827	-		Pf1N1B4_3210	0.76	-0.4
3,593,858	+		Pf1N1B4_3210	0.79	-1.0
3,593,858	+		Pf1N1B4_3210	0.79	+0.4
3,593,858	+		Pf1N1B4_3210	0.79	-1.0
3,593,912	+		Pf1N1B4_3210	0.86	+0.0
3,593,912	+				+0.0
3,593,912	+				+0.0
3,593,912	+		Pf1N1B4_3210	0.86	+0.7
3,593,913	-		Pf1N1B4_3210	0.86	-1.2
3,593,913	-		Pf1N1B4_3210	0.86	-0.5
3,593,913	-		Pf1N1B4_3210	0.86	+1.0
3,594,075	+				-0.3
3,594,075	+				+0.6
3,594,075	+				-1.6
3,594,076	-				-1.2
3,594,076	-				+0.0
3,594,076	-				-1.6
3,594,076	-				-0.6
3,594,076	-				-0.6
3,594,076	-				-2.2
3,594,196	+		Pf1N1B4_3211	0.45	-1.1
3,594,196	+		Pf1N1B4_3211	0.45	+0.8
3,594,196	+		Pf1N1B4_3211	0.45	-3.0
3,594,196	+		Pf1N1B4_3211	0.45	+0.0
3,594,197	-		Pf1N1B4_3211	0.45	-0.8
3,594,197	-		Pf1N1B4_3211	0.45	-0.4
3,594,197	-		Pf1N1B4_3211	0.45	-0.4
3,594,197	-		Pf1N1B4_3211	0.45	-0.2
3,594,197	-				+1.0
3,594,197	-		Pf1N1B4_3211	0.45	-0.6
3,594,199	+		Pf1N1B4_3211	0.46	-2.1
3,594,413	+				+1.3
3,594,413	+				-1.6
3,594,414	-				-2.7
3,594,498	+				+1.0
3,594,593	+				+0.6
3,594,594	-		Pf1N1B4_3212	0.16	+0.2
3,594,594	-		Pf1N1B4_3212	0.16	-0.2
3,594,620	+		Pf1N1B4_3212	0.20	-1.3
3,594,696	-		Pf1N1B4_3212	0.31	-0.1
3,594,785	+		Pf1N1B4_3212	0.44	-1.0
3,594,786	-		Pf1N1B4_3212	0.44	-0.4
3,594,870	-		Pf1N1B4_3212	0.56	+1.0
3,594,870	-		Pf1N1B4_3212	0.56	+0.2
3,595,148	-				-1.0
3,595,227	-		Pf1N1B4_3213	0.29	-0.2