Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2677

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
3,015,489	+		Pf1N1B4_2676	0.72	+2.1
3,015,489	+				-1.0
3,016,487	+				+0.0
3,016,487	+				-0.5
3,016,487	+				+0.1
3,016,487	+				+1.3
3,016,578	+		Pf1N1B4_2678	0.34	-0.2
3,016,578	+		Pf1N1B4_2678	0.34	-0.2
3,016,603	-		Pf1N1B4_2678	0.42	+2.0
3,016,738	+				-0.2
3,016,764	+				+0.5
3,016,764	+				+2.1
3,016,764	+				-0.4
3,016,765	-				+0.3
3,016,765	-				+1.3
3,016,765	-				-0.4
3,016,765	-				+0.8
3,016,765	-				-0.2
3,016,765	-				+1.7
3,016,810	+				+1.3
3,016,810	+				+0.0
3,016,810	+				-0.1
3,016,810	+				+1.3
3,016,810	+				+0.9
3,016,811	-				+2.1
3,016,811	-				+0.9
3,016,811	-				+1.9
3,016,811	-				+1.3
3,016,832	+				+0.9
3,016,832	+				+1.1
3,016,832	+				+0.3
3,016,832	+				-1.0
3,016,832	+				+0.8
3,016,832	+				+1.9
3,016,833	-				+1.3
3,016,833	-				+1.0
3,016,833	-				+0.2
3,016,833	-				-0.2
3,016,833	-				-1.0
3,016,833	-				-0.3
3,016,833	-				+2.7
3,016,903	+				-0.7
3,016,903	+				-0.7
3,016,903	+				-0.2
3,016,903	+				-0.7
3,016,903	+				-1.2
3,016,903	+				-0.2
3,016,904	-				+0.8
3,016,904	-				-0.8
3,016,904	-				+0.3
3,016,907	+				+1.9
3,016,907	+				+0.2
3,016,907	+				-0.0
3,016,908	-				-0.1
3,016,908	-				+3.3
3,016,908	-				+1.1
3,016,908	-				+0.3
3,016,908	-				-1.7
3,016,908	-				-1.4
3,016,908	-				-0.4
3,016,908	-				-0.8
3,016,908	-				+0.3
3,016,911	+				-1.0
3,016,912	-				-0.7
3,016,912	-				+1.0
3,016,912	-				-0.7
3,016,912	-				-1.2
3,017,014	+		Pf1N1B4_2679	0.17	+0.2
3,017,014	+		Pf1N1B4_2679	0.17	-0.7
3,017,014	+		Pf1N1B4_2679	0.17	-0.2
3,017,015	-				-1.2
3,017,015	-		Pf1N1B4_2679	0.18	-1.2
3,017,015	-		Pf1N1B4_2679	0.18	+0.6
3,017,015	-		Pf1N1B4_2679	0.18	-0.2
3,017,170	+		Pf1N1B4_2679	0.42	+0.0
3,017,171	-		Pf1N1B4_2679	0.42	+1.3
3,017,171	-				+0.3
3,017,171	-		Pf1N1B4_2679	0.42	+0.1
3,017,439	+		Pf1N1B4_2679	0.84	+0.1
3,017,442	+		Pf1N1B4_2679	0.84	+0.3
3,017,443	-		Pf1N1B4_2679	0.84	-0.7
3,017,443	-		Pf1N1B4_2679	0.84	-0.2
3,017,450	+		Pf1N1B4_2679	0.85	-0.5
3,017,451	-		Pf1N1B4_2679	0.86	-1.0
3,017,470	-		Pf1N1B4_2679	0.88	+1.3