Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2638

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
2,977,160	-				+1.2
2,977,210	+				-0.6
2,977,279	+				+0.5
2,977,279	+				+2.4
2,977,279	+				-1.0
2,977,279	+				-0.5
2,977,279	+				+1.4
2,977,294	+				+1.6
2,977,294	+				+0.7
2,977,294	+				-0.4
2,977,294	+				-0.6
2,977,294	+				+1.3
2,977,294	+				-0.0
2,977,294	+				+2.0
2,977,294	+				+0.7
2,977,294	+				+0.3
2,977,294	+				+0.2
2,977,294	+				-1.6
2,977,294	+				+1.6
2,977,294	+				-0.4
2,977,294	+				+0.1
2,977,294	+				-0.5
2,977,294	+				+0.0
2,977,294	+				+1.1
2,977,294	+				+3.2
2,977,294	+				+2.2
2,977,294	+				+0.3
2,977,294	+				+0.8
2,977,294	+				+1.0
2,977,294	+				+2.2
2,977,294	+				+0.6
2,977,294	+				+0.2
2,977,294	+				+1.1
2,977,294	+				-0.6
2,977,294	+				+0.8
2,977,294	+				+2.1
2,977,294	+				+1.9
2,977,299	+				+0.3
2,977,299	+				-0.2
2,977,299	+				+2.2
2,977,459	+				+2.0
2,977,459	+				+0.8
2,977,462	+				+0.4
2,977,462	+				+0.9
2,977,462	+				-1.6
2,977,462	+				+0.7
2,977,462	+				+2.2
2,977,462	+				+1.4
2,977,462	+				+0.8
2,977,462	+				+1.4
2,977,462	+				+0.9
2,977,462	+				+1.5
2,977,462	+				+1.0
2,977,462	+				+1.4
2,977,462	+				+1.4
2,977,462	+				+1.1
2,977,462	+				+1.1
2,977,462	+				+0.3
2,977,462	+				+1.8
2,977,462	+				+1.1
2,977,585	+		Pf1N1B4_2637	0.20	+0.8
2,977,618	+		Pf1N1B4_2637	0.24	+0.4
2,977,618	+		Pf1N1B4_2637	0.24	+1.5
2,977,909	+		Pf1N1B4_2637	0.65	+1.2
2,977,909	+		Pf1N1B4_2637	0.65	+2.0
2,977,909	+		Pf1N1B4_2637	0.65	+2.5
2,977,909	+		Pf1N1B4_2637	0.65	+1.9
2,977,909	+		Pf1N1B4_2637	0.65	+2.2
2,977,909	+		Pf1N1B4_2637	0.65	+1.2
2,977,909	+		Pf1N1B4_2637	0.65	+1.4
2,977,909	+		Pf1N1B4_2637	0.65	+0.1
2,977,909	+		Pf1N1B4_2637	0.65	+1.0
2,977,909	+		Pf1N1B4_2637	0.65	+2.1
2,977,909	+		Pf1N1B4_2637	0.65	+2.2
2,977,909	+				+0.8
2,977,909	+		Pf1N1B4_2637	0.65	+0.1
2,977,909	+		Pf1N1B4_2637	0.65	+1.7
2,977,909	+		Pf1N1B4_2637	0.65	+1.6
2,977,909	+		Pf1N1B4_2637	0.65	+1.0
2,977,909	+		Pf1N1B4_2637	0.65	+2.7
2,977,909	+		Pf1N1B4_2637	0.65	+0.1
2,977,909	+		Pf1N1B4_2637	0.65	+0.9
2,977,909	+		Pf1N1B4_2637	0.65	+1.0
2,978,135	+				+0.4
2,978,142	+				+0.8
2,978,142	+				+0.9
2,978,149	+				-0.1
2,978,149	+				+1.0
2,979,090	-				-0.0
2,979,244	+				-0.4
2,979,245	-				-1.0
2,979,245	-				+0.4
2,979,271	+				-1.1
2,979,271	+				-0.6
2,979,271	+				+0.6
2,979,271	+				-0.4
2,979,271	+				-0.2
2,979,271	+				+0.6
2,979,272	-				-1.4
2,979,272	-				-0.2
2,979,272	-				+0.4
2,979,272	-				-1.6
2,979,272	-				-0.0
2,979,272	-				-0.9
2,979,272	-				+0.1
2,979,272	-				-0.7
2,979,272	-				-0.2
2,979,272	-				+0.7
2,979,364	+		Pf1N1B4_2639	0.17	-0.5
2,979,364	+		Pf1N1B4_2639	0.17	-1.8
2,979,365	-		Pf1N1B4_2639	0.17	-1.0
2,979,365	-		Pf1N1B4_2639	0.17	+0.2
2,979,365	-		Pf1N1B4_2639	0.17	+0.3
2,979,387	+		Pf1N1B4_2639	0.21	-1.2
2,979,387	+		Pf1N1B4_2639	0.21	+1.4
2,979,387	+		Pf1N1B4_2639	0.21	+2.4
2,979,387	+		Pf1N1B4_2639	0.21	+0.4
2,979,387	+		Pf1N1B4_2639	0.21	-0.0
2,979,387	+		Pf1N1B4_2639	0.21	+1.0
2,979,387	+		Pf1N1B4_2639	0.21	-0.2
2,979,387	+		Pf1N1B4_2639	0.21	-0.2
2,979,387	+		Pf1N1B4_2639	0.21	-1.1
2,979,388	-		Pf1N1B4_2639	0.21	-1.4
2,979,388	-		Pf1N1B4_2639	0.21	+1.1
2,979,388	-		Pf1N1B4_2639	0.21	-0.6
2,979,388	-		Pf1N1B4_2639	0.21	+1.4
2,979,388	-		Pf1N1B4_2639	0.21	+0.7
2,979,388	-		Pf1N1B4_2639	0.21	-0.2
2,979,388	-		Pf1N1B4_2639	0.21	-0.4
2,979,406	+		Pf1N1B4_2639	0.23	-0.6
2,979,406	+		Pf1N1B4_2639	0.23	-0.1
2,979,406	+		Pf1N1B4_2639	0.23	-2.4
2,979,406	+		Pf1N1B4_2639	0.23	-1.0
2,979,406	+		Pf1N1B4_2639	0.23	+1.4
2,979,406	+		Pf1N1B4_2639	0.23	-2.2
2,979,406	+		Pf1N1B4_2639	0.23	+1.0
2,979,406	+		Pf1N1B4_2639	0.23	+0.6
2,979,407	-		Pf1N1B4_2639	0.23	+0.7
2,979,407	-		Pf1N1B4_2639	0.23	+0.9
2,979,407	-		Pf1N1B4_2639	0.23	-0.2
2,979,407	-		Pf1N1B4_2639	0.23	-1.0
2,979,407	-		Pf1N1B4_2639	0.23	-0.2
2,979,407	-		Pf1N1B4_2639	0.23	+1.6
2,979,407	-		Pf1N1B4_2639	0.23	+0.8
2,979,458	+		Pf1N1B4_2639	0.31	-0.2
2,979,458	+		Pf1N1B4_2639	0.31	-0.6
2,979,514	+		Pf1N1B4_2639	0.39	-1.8
2,979,514	+		Pf1N1B4_2639	0.39	+0.8
2,979,514	+		Pf1N1B4_2639	0.39	-0.7
2,979,514	+		Pf1N1B4_2639	0.39	-0.6
2,979,514	+		Pf1N1B4_2639	0.39	+0.0
2,979,514	+		Pf1N1B4_2639	0.39	-0.6
2,979,514	+		Pf1N1B4_2639	0.39	-0.4
2,979,514	+		Pf1N1B4_2639	0.39	-0.2
2,979,514	+		Pf1N1B4_2639	0.39	-0.5
2,979,514	+		Pf1N1B4_2639	0.39	+0.0
2,979,514	+		Pf1N1B4_2639	0.39	-1.2
2,979,514	+		Pf1N1B4_2639	0.39	-0.2
2,979,514	+		Pf1N1B4_2639	0.39	+0.7
2,979,515	-		Pf1N1B4_2639	0.39	+0.1
2,979,515	-		Pf1N1B4_2639	0.39	+0.1
2,979,515	-		Pf1N1B4_2639	0.39	-0.4
2,979,515	-		Pf1N1B4_2639	0.39	-1.1
2,979,515	-		Pf1N1B4_2639	0.39	-2.6
2,979,515	-		Pf1N1B4_2639	0.39	+0.0
2,979,521	+		Pf1N1B4_2639	0.40	-0.4
2,979,535	+		Pf1N1B4_2639	0.42	-0.5
2,979,535	+		Pf1N1B4_2639	0.42	-0.2
2,979,535	+		Pf1N1B4_2639	0.42	+1.4
2,979,535	+		Pf1N1B4_2639	0.42	+0.9
2,979,536	-				-0.2
2,979,536	-		Pf1N1B4_2639	0.42	-0.6
2,979,536	-		Pf1N1B4_2639	0.42	+1.4
2,979,536	-		Pf1N1B4_2639	0.42	-0.6
2,979,568	+		Pf1N1B4_2639	0.46	+0.2
2,979,571	+		Pf1N1B4_2639	0.47	-1.0
2,979,571	+		Pf1N1B4_2639	0.47	+0.1
2,979,571	+		Pf1N1B4_2639	0.47	-0.7
2,979,571	+		Pf1N1B4_2639	0.47	-1.6
2,979,571	+		Pf1N1B4_2639	0.47	+0.4
2,979,571	+		Pf1N1B4_2639	0.47	-1.4
2,979,572	-		Pf1N1B4_2639	0.47	+0.4
2,979,572	-		Pf1N1B4_2639	0.47	+1.0
2,979,572	-		Pf1N1B4_2639	0.47	-1.4
2,979,572	-		Pf1N1B4_2639	0.47	-1.0
2,979,715	+		Pf1N1B4_2639	0.68	-1.1
2,979,715	+		Pf1N1B4_2639	0.68	-0.4
2,979,716	-		Pf1N1B4_2639	0.68	+0.7
2,979,716	-		Pf1N1B4_2639	0.68	+1.4
2,979,984	+				+0.2
2,979,984	+				-0.6