Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2460

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
2,789,549	+				+1.7
2,789,549	+				+2.3
2,789,550	-				+1.4
2,789,550	-				+2.0
2,789,680	+				-0.6
2,789,681	-				-0.4
2,790,096	+		Pf1N1B4_2458	0.66	-1.4
2,790,097	-		Pf1N1B4_2458	0.66	+0.6
2,790,125	+		Pf1N1B4_2458	0.70	-0.5
2,790,125	+		Pf1N1B4_2458	0.70	-1.8
2,790,125	+		Pf1N1B4_2458	0.70	-1.8
2,790,126	-		Pf1N1B4_2458	0.70	+1.2
2,790,126	-		Pf1N1B4_2458	0.70	-1.4
2,790,126	-		Pf1N1B4_2458	0.70	-0.2
2,790,142	+		Pf1N1B4_2458	0.73	-1.8
2,790,298	+				-0.1
2,790,312	-				+0.5
2,790,443	+				+1.7
2,790,444	-				+0.1
2,790,444	-				-0.8
2,790,446	+				+1.4
2,790,446	+				-0.3
2,790,446	+				-0.1
2,790,546	+		Pf1N1B4_2460	0.12	-0.9
2,790,547	-		Pf1N1B4_2460	0.12	+1.4
2,790,547	-		Pf1N1B4_2460	0.12	+0.1
2,790,722	-		Pf1N1B4_2460	0.32	+0.4
2,790,868	-		Pf1N1B4_2460	0.49	-2.1
2,790,966	+		Pf1N1B4_2460	0.60	+0.6
2,790,966	+		Pf1N1B4_2460	0.60	-1.4
2,790,966	+		Pf1N1B4_2460	0.60	-0.6
2,790,966	+		Pf1N1B4_2460	0.60	+0.6
2,790,967	-		Pf1N1B4_2460	0.61	-2.8
2,791,077	+		Pf1N1B4_2460	0.73	-0.9
2,791,078	-		Pf1N1B4_2460	0.74	-0.1
2,791,116	+		Pf1N1B4_2460	0.78	+0.1
2,791,116	+		Pf1N1B4_2460	0.78	+0.2
2,791,116	+		Pf1N1B4_2460	0.78	-0.9
2,791,116	+		Pf1N1B4_2460	0.78	-0.8
2,791,117	-		Pf1N1B4_2460	0.78	+0.4
2,791,117	-		Pf1N1B4_2460	0.78	+0.1
2,791,117	-		Pf1N1B4_2460	0.78	+0.4
2,791,117	-		Pf1N1B4_2460	0.78	+1.0
2,791,178	+		Pf1N1B4_2460	0.85	+1.1
2,791,179	-		Pf1N1B4_2460	0.85	-1.2
2,791,179	-		Pf1N1B4_2460	0.85	-0.6
2,791,179	-		Pf1N1B4_2460	0.85	-1.1
2,791,179	-		Pf1N1B4_2460	0.85	+2.0
2,791,179	-		Pf1N1B4_2460	0.85	-1.8
2,791,179	-		Pf1N1B4_2460	0.85	+0.6
2,791,302	+				-0.1
2,791,303	-				-2.1
2,791,363	+				-0.6
2,791,364	-				+0.2
2,791,364	-				-0.2
2,791,364	-				-0.0
2,791,482	+				-1.4
2,791,482	+				+0.0
2,791,483	-				+0.4
2,791,483	-				+1.6
2,791,483	-				-0.9
2,791,486	+				+0.4
2,791,486	+				-0.7
2,791,486	+				+1.2
2,791,486	+				+2.1
2,791,487	-				-0.4
2,791,487	-				+1.4
2,791,487	-				-0.9
2,791,487	-				+0.8
2,791,559	+				-0.5
2,791,680	+		Pf1N1B4_2461	0.14	+0.2
2,791,681	-		Pf1N1B4_2461	0.14	-0.5
2,791,833	+		Pf1N1B4_2461	0.27	-1.5
2,791,833	+		Pf1N1B4_2461	0.27	-1.3
2,791,833	+		Pf1N1B4_2461	0.27	+1.2
2,791,833	+		Pf1N1B4_2461	0.27	-0.2
2,791,834	-		Pf1N1B4_2461	0.27	-0.4
2,791,834	-		Pf1N1B4_2461	0.27	+0.7
2,791,834	-		Pf1N1B4_2461	0.27	+0.4
2,791,834	-		Pf1N1B4_2461	0.27	-1.8
2,791,834	-		Pf1N1B4_2461	0.27	-0.7
2,791,834	-		Pf1N1B4_2461	0.27	-0.3
2,791,834	-		Pf1N1B4_2461	0.27	-1.4
2,791,879	+		Pf1N1B4_2461	0.31	+1.4
2,791,880	-		Pf1N1B4_2461	0.31	+1.4
2,791,880	-		Pf1N1B4_2461	0.31	-0.6
2,791,880	-				+0.4
2,791,880	-		Pf1N1B4_2461	0.31	-1.2
2,791,925	-		Pf1N1B4_2461	0.35	-0.4
2,791,939	+		Pf1N1B4_2461	0.36	-1.4
2,791,939	+		Pf1N1B4_2461	0.36	+1.1
2,792,080	+		Pf1N1B4_2461	0.47	-0.0
2,792,080	+		Pf1N1B4_2461	0.47	-0.9
2,792,081	-				+1.4
2,792,298	-		Pf1N1B4_2461	0.66	+0.3