Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2415

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
2,735,865	+		Pf1N1B4_2414	0.29	+0.1
2,735,999	+		Pf1N1B4_2414	0.39	-0.6
2,735,999	+		Pf1N1B4_2414	0.39	+1.2
2,735,999	+		Pf1N1B4_2414	0.39	-1.2
2,735,999	+		Pf1N1B4_2414	0.39	+0.8
2,735,999	+		Pf1N1B4_2414	0.39	+0.4
2,735,999	+		Pf1N1B4_2414	0.39	-0.5
2,735,999	+		Pf1N1B4_2414	0.39	-1.6
2,736,000	-		Pf1N1B4_2414	0.39	-1.8
2,736,000	-		Pf1N1B4_2414	0.39	-1.4
2,736,000	-		Pf1N1B4_2414	0.39	-0.6
2,736,000	-		Pf1N1B4_2414	0.39	-0.4
2,736,000	-		Pf1N1B4_2414	0.39	+0.9
2,736,249	+		Pf1N1B4_2414	0.57	+0.1
2,736,250	-		Pf1N1B4_2414	0.57	-1.6
2,736,250	-		Pf1N1B4_2414	0.57	+0.8
2,736,250	-		Pf1N1B4_2414	0.57	-0.2
2,736,250	-		Pf1N1B4_2414	0.57	+0.7
2,736,576	+		Pf1N1B4_2414	0.82	-0.8
2,736,596	-		Pf1N1B4_2414	0.83	-0.2
2,736,717	+				-0.2
2,736,718	-				+0.8
2,736,797	-				+1.0
2,736,818	-				-0.3
2,736,931	+				-0.3
2,737,415	+		Pf1N1B4_2415	0.41	+0.5
2,737,464	-		Pf1N1B4_2415	0.44	-1.6
2,737,464	-		Pf1N1B4_2415	0.44	-0.6
2,737,725	-		Pf1N1B4_2415	0.63	-1.6
2,737,725	-		Pf1N1B4_2415	0.63	-1.2
2,737,796	+		Pf1N1B4_2415	0.67	-1.4
2,737,892	+		Pf1N1B4_2415	0.74	-2.1
2,737,892	+		Pf1N1B4_2415	0.74	+0.3
2,737,892	+		Pf1N1B4_2415	0.74	+0.5
2,737,892	+		Pf1N1B4_2415	0.74	+0.7
2,737,940	+		Pf1N1B4_2415	0.77	-1.8
2,737,940	+		Pf1N1B4_2415	0.77	-2.7
2,737,940	+		Pf1N1B4_2415	0.77	-0.8
2,738,075	+		Pf1N1B4_2415	0.87	+0.2
2,738,189	+				+1.1
2,738,297	+				-0.2
2,738,297	+				+1.4
2,738,298	-				+0.1
2,738,298	-				-0.6
2,738,298	-				-1.2
2,738,298	-				-0.0
2,738,298	-				-0.1
2,738,298	-				+0.1
2,738,335	+				+0.4
2,738,340	+				-0.6
2,738,340	+				+1.5
2,738,341	-				-1.1
2,738,358	-				+0.4
2,738,378	+				-0.1
2,738,540	-				+1.4
2,738,540	-				-0.4
2,738,540	-				-1.6
2,738,548	+				+1.2
2,738,611	+				+0.4
2,738,612	-				-0.9
2,738,612	-				+1.1
2,738,612	-				+1.8
2,738,612	-				+1.9
2,738,612	-				+0.2
2,738,614	+				+1.7
2,738,614	+				-0.2
2,738,615	-				-0.3
2,738,615	-				-0.6
2,739,004	+		Pf1N1B4_2416	0.27	+1.7
2,739,005	-		Pf1N1B4_2416	0.27	+0.9
2,739,005	-		Pf1N1B4_2416	0.27	-0.5
2,739,005	-		Pf1N1B4_2416	0.27	+0.4
2,739,005	-		Pf1N1B4_2416	0.27	+0.5
2,739,005	-		Pf1N1B4_2416	0.27	+0.4
2,739,133	+		Pf1N1B4_2416	0.34	-0.6
2,739,133	+		Pf1N1B4_2416	0.34	+1.7
2,739,134	-		Pf1N1B4_2416	0.34	-0.2
2,739,134	-		Pf1N1B4_2416	0.34	-1.4
2,739,134	-		Pf1N1B4_2416	0.34	+0.7
2,739,134	-		Pf1N1B4_2416	0.34	-0.3
2,739,134	-		Pf1N1B4_2416	0.34	-0.2
2,739,134	-		Pf1N1B4_2416	0.34	+1.0
2,739,138	-		Pf1N1B4_2416	0.35	+0.8
2,739,138	-		Pf1N1B4_2416	0.35	+2.0