Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2358

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
2,670,115	+		Pf1N1B4_2357	0.56	-0.5
2,670,115	+		Pf1N1B4_2357	0.56	-0.7
2,670,115	+		Pf1N1B4_2357	0.56	+1.4
2,670,115	+		Pf1N1B4_2357	0.56	+1.8
2,670,115	+		Pf1N1B4_2357	0.56	-0.2
2,670,116	-		Pf1N1B4_2357	0.56	-0.2
2,670,116	-		Pf1N1B4_2357	0.56	-2.7
2,670,116	-		Pf1N1B4_2357	0.56	-0.6
2,670,116	-		Pf1N1B4_2357	0.56	-1.4
2,670,116	-		Pf1N1B4_2357	0.56	-0.4
2,670,593	+		Pf1N1B4_2357	0.79	-1.2
2,670,593	+		Pf1N1B4_2357	0.79	+0.2
2,670,594	-				-0.9
2,670,594	-		Pf1N1B4_2357	0.80	+1.0
2,670,594	-		Pf1N1B4_2357	0.80	+0.4
2,670,594	-		Pf1N1B4_2357	0.80	+0.8
2,670,801	+		Pf1N1B4_2357	0.90	+0.7
2,670,802	-		Pf1N1B4_2357	0.90	+0.6
2,670,802	-		Pf1N1B4_2357	0.90	-0.6
2,670,802	-		Pf1N1B4_2357	0.90	-0.0
2,670,802	-		Pf1N1B4_2357	0.90	-0.1
2,670,988	-				+0.1
2,671,029	+				+0.7
2,671,029	+				+1.4
2,671,030	-				+0.4
2,671,046	+				+0.2
2,671,046	+				+0.2
2,671,046	+				-0.4
2,671,047	-				+0.4
2,671,047	-				+0.4
2,671,047	-				-2.2
2,671,047	-				+1.6
2,671,047	-				-0.2
2,671,047	-				+1.0
2,671,051	-				+0.4
2,671,069	+				+1.5
2,671,069	+				-1.6
2,671,069	+				-0.9
2,671,069	+				+1.8
2,671,070	-				-0.8
2,671,070	-				+0.9
2,671,070	-				+0.7
2,671,070	-				+1.4
2,671,070	-				-2.6
2,671,070	-				+0.8
2,671,070	-				-0.3
2,671,070	-				+2.4
2,671,070	-				+0.7
2,671,070	-				+1.7
2,671,070	-				+0.1
2,671,070	-				+1.4
2,671,281	-				+0.5
2,671,281	-				+0.6
2,671,325	+				-0.2
2,671,354	+				+1.0
2,671,355	-				-0.2
2,671,355	-				+0.2
2,671,355	-				-0.6
2,671,389	-				+0.8
2,671,422	-				+1.1
2,671,422	-				-2.4
2,671,491	-				+2.4
2,671,861	+		Pf1N1B4_2358	0.14	+1.7
2,671,861	+		Pf1N1B4_2358	0.14	-0.9
2,671,861	+		Pf1N1B4_2358	0.14	-0.2
2,671,861	+		Pf1N1B4_2358	0.14	+0.7
2,671,861	+		Pf1N1B4_2358	0.14	+1.4
2,671,861	+		Pf1N1B4_2358	0.14	-0.4
2,671,861	+		Pf1N1B4_2358	0.14	+1.8
2,671,862	-		Pf1N1B4_2358	0.14	+0.6
2,671,862	-		Pf1N1B4_2358	0.14	+1.8
2,671,862	-		Pf1N1B4_2358	0.14	-1.4
2,671,862	-		Pf1N1B4_2358	0.14	+1.1
2,671,862	-		Pf1N1B4_2358	0.14	-1.0
2,671,862	-		Pf1N1B4_2358	0.14	+0.4
2,671,862	-		Pf1N1B4_2358	0.14	+0.1
2,671,862	-		Pf1N1B4_2358	0.14	-0.5
2,671,862	-		Pf1N1B4_2358	0.14	+1.0
2,671,862	-		Pf1N1B4_2358	0.14	+0.0
2,671,862	-		Pf1N1B4_2358	0.14	-0.9
2,671,862	-		Pf1N1B4_2358	0.14	+0.2
2,671,862	-		Pf1N1B4_2358	0.14	+0.5
2,671,862	-		Pf1N1B4_2358	0.14	+0.1
2,671,862	-		Pf1N1B4_2358	0.14	+1.4
2,671,863	+		Pf1N1B4_2358	0.14	-0.7
2,671,863	+		Pf1N1B4_2358	0.14	-0.3
2,671,864	-		Pf1N1B4_2358	0.14	+0.0
2,671,864	-		Pf1N1B4_2358	0.14	+0.5
2,671,864	-		Pf1N1B4_2358	0.14	+0.2
2,671,864	-		Pf1N1B4_2358	0.14	-1.8
2,671,864	-		Pf1N1B4_2358	0.14	+1.4
2,671,864	-		Pf1N1B4_2358	0.14	-0.2
2,671,916	-		Pf1N1B4_2358	0.15	-0.4
2,672,263	+		Pf1N1B4_2358	0.21	+0.7
2,672,263	+		Pf1N1B4_2358	0.21	-3.0
2,672,263	+		Pf1N1B4_2358	0.21	-1.8
2,672,263	+		Pf1N1B4_2358	0.21	+0.8
2,672,263	+		Pf1N1B4_2358	0.21	+1.4
2,672,263	+		Pf1N1B4_2358	0.21	+1.0
2,672,264	-		Pf1N1B4_2358	0.21	+1.5
2,672,264	-		Pf1N1B4_2358	0.21	-0.8
2,672,264	-		Pf1N1B4_2358	0.21	+0.6
2,672,264	-		Pf1N1B4_2358	0.21	+0.1
2,672,264	-		Pf1N1B4_2358	0.21	-0.2
2,672,264	-		Pf1N1B4_2358	0.21	+0.2
2,672,419	+		Pf1N1B4_2358	0.23	+0.6
2,672,419	+		Pf1N1B4_2358	0.23	-1.9
2,672,419	+		Pf1N1B4_2358	0.23	+0.8
2,672,419	+		Pf1N1B4_2358	0.23	+0.7
2,672,419	+		Pf1N1B4_2358	0.23	-0.4
2,672,419	+		Pf1N1B4_2358	0.23	-0.0
2,672,419	+		Pf1N1B4_2358	0.23	+0.3
2,672,419	+		Pf1N1B4_2358	0.23	-0.2
2,672,419	+		Pf1N1B4_2358	0.23	-0.2
2,672,420	-		Pf1N1B4_2358	0.23	+0.3
2,672,420	-		Pf1N1B4_2358	0.23	+0.9
2,672,480	+		Pf1N1B4_2358	0.24	+0.9
2,672,480	+		Pf1N1B4_2358	0.24	+3.2
2,672,480	+		Pf1N1B4_2358	0.24	+0.6
2,672,480	+		Pf1N1B4_2358	0.24	-1.6
2,672,480	+		Pf1N1B4_2358	0.24	+1.4
2,672,480	+		Pf1N1B4_2358	0.24	+0.1
2,672,480	+		Pf1N1B4_2358	0.24	-0.2
2,672,481	-		Pf1N1B4_2358	0.24	+0.6
2,672,481	-		Pf1N1B4_2358	0.24	+0.4
2,672,632	+		Pf1N1B4_2358	0.27	-0.6
2,672,633	-		Pf1N1B4_2358	0.27	+0.4
2,672,633	-		Pf1N1B4_2358	0.27	+0.7
2,672,633	-		Pf1N1B4_2358	0.27	-0.5
2,672,633	-		Pf1N1B4_2358	0.27	-0.3
2,672,635	+		Pf1N1B4_2358	0.27	+0.4
2,672,635	+		Pf1N1B4_2358	0.27	-0.6
2,672,636	-		Pf1N1B4_2358	0.27	+1.1
2,672,940	-		Pf1N1B4_2358	0.32	+1.3
2,672,992	+		Pf1N1B4_2358	0.33	-0.5
2,672,992	+		Pf1N1B4_2358	0.33	+0.7
2,672,992	+		Pf1N1B4_2358	0.33	+0.7
2,672,992	+		Pf1N1B4_2358	0.33	+0.1
2,672,993	-		Pf1N1B4_2358	0.33	+1.1
2,672,993	-		Pf1N1B4_2358	0.33	+0.4
2,672,993	-		Pf1N1B4_2358	0.33	-1.4
2,673,306	+		Pf1N1B4_2358	0.38	+1.3
2,673,307	-		Pf1N1B4_2358	0.38	+0.8
2,673,438	-		Pf1N1B4_2358	0.40	+0.9
2,673,438	-		Pf1N1B4_2358	0.40	+0.3
2,673,559	+		Pf1N1B4_2358	0.42	-0.7
2,673,559	+		Pf1N1B4_2358	0.42	+1.0
2,673,560	-		Pf1N1B4_2358	0.42	+0.9
2,673,560	-		Pf1N1B4_2358	0.42	+0.2
2,673,560	-		Pf1N1B4_2358	0.42	+1.3
2,673,692	+		Pf1N1B4_2358	0.45	+1.2
2,673,693	-		Pf1N1B4_2358	0.45	+3.0
2,673,693	-		Pf1N1B4_2358	0.45	+1.9
2,673,750	+		Pf1N1B4_2358	0.46	-1.7
2,673,751	-		Pf1N1B4_2358	0.46	+2.0
2,673,977	-		Pf1N1B4_2358	0.50	+0.4
2,674,888	+		Pf1N1B4_2358	0.65	+1.9
2,674,931	+		Pf1N1B4_2358	0.66	-0.2
2,674,931	+		Pf1N1B4_2358	0.66	-1.0
2,675,360	-				+0.8
2,675,547	+		Pf1N1B4_2358	0.76	-0.4
2,675,750	+		Pf1N1B4_2358	0.80	+0.6
2,675,750	+		Pf1N1B4_2358	0.80	+1.6
2,675,750	+		Pf1N1B4_2358	0.80	+1.1
2,675,751	-		Pf1N1B4_2358	0.80	+1.4
2,675,751	-		Pf1N1B4_2358	0.80	-0.2
2,675,754	+				+0.4
2,675,754	+		Pf1N1B4_2358	0.80	+0.4
2,675,754	+		Pf1N1B4_2358	0.80	-1.8
2,675,754	+		Pf1N1B4_2358	0.80	-0.2
2,675,754	+		Pf1N1B4_2358	0.80	-0.5
2,675,754	+		Pf1N1B4_2358	0.80	+0.2
2,675,755	-		Pf1N1B4_2358	0.80	+0.1
2,675,755	-		Pf1N1B4_2358	0.80	-0.8
2,675,755	-		Pf1N1B4_2358	0.80	+2.1
2,675,755	-		Pf1N1B4_2358	0.80	+0.4
2,675,755	-		Pf1N1B4_2358	0.80	+1.8
2,675,755	-		Pf1N1B4_2358	0.80	+1.7
2,675,755	-		Pf1N1B4_2358	0.80	+1.2
2,675,755	-		Pf1N1B4_2358	0.80	+0.4
2,675,755	-		Pf1N1B4_2358	0.80	+1.0
2,675,755	-		Pf1N1B4_2358	0.80	+1.9
2,676,151	+		Pf1N1B4_2358	0.86	+0.8
2,676,218	-		Pf1N1B4_2358	0.88	-0.4
2,676,239	-		Pf1N1B4_2358	0.88	-0.1
2,676,239	-		Pf1N1B4_2358	0.88	-0.6
2,676,239	-		Pf1N1B4_2358	0.88	+1.4
2,676,239	-		Pf1N1B4_2358	0.88	-0.0
2,676,239	-		Pf1N1B4_2358	0.88	-0.2
2,676,239	-		Pf1N1B4_2358	0.88	-0.7
2,676,272	-		Pf1N1B4_2358	0.88	+0.3
2,676,272	-		Pf1N1B4_2358	0.88	+1.0
2,676,489	-				-0.6
2,676,563	+				-0.9
2,676,563	+				-1.2
2,676,564	-				-0.4
2,676,564	-				-0.0
2,676,564	-				-0.6
2,676,564	-				+1.4
2,676,698	+				+1.0
2,676,698	+				+0.7
2,676,698	+				-0.9
2,676,698	+				+1.1
2,676,699	-				-0.6
2,676,699	-				-0.0
2,676,699	-				-2.1
2,676,699	-				-1.1
2,676,699	-				+0.8
2,676,754	-				+2.0
2,676,884	-				+0.3
2,676,884	-				+1.1
2,677,046	+		Pf1N1B4_2359	0.22	-1.9
2,677,047	-		Pf1N1B4_2359	0.22	-1.2
2,677,129	+		Pf1N1B4_2359	0.40	-0.8
2,677,259	+		Pf1N1B4_2359	0.68	+0.8
2,677,259	+		Pf1N1B4_2359	0.68	-0.6
2,677,259	+		Pf1N1B4_2359	0.68	-2.2
2,677,260	-		Pf1N1B4_2359	0.68	-0.9
2,677,283	+		Pf1N1B4_2359	0.73	-1.6
2,677,284	-		Pf1N1B4_2359	0.73	-1.6
2,677,284	-		Pf1N1B4_2359	0.73	+0.3
2,677,384	+				-0.2
2,677,794	+		Pf1N1B4_2360	0.72	+2.4
2,677,794	+		Pf1N1B4_2360	0.72	-1.2
2,677,794	+		Pf1N1B4_2360	0.72	+0.9
2,677,794	+		Pf1N1B4_2360	0.72	-0.9
2,677,795	-		Pf1N1B4_2360	0.73	+1.0
2,677,795	-		Pf1N1B4_2360	0.73	+0.2
2,677,885	+				+0.0
2,677,885	+				+1.8
2,677,886	-				+0.7
2,677,897	+				+0.0
2,677,897	+				+1.0
2,677,897	+				+0.8
2,677,897	+				-2.7
2,677,897	+				-1.8
2,677,898	-				+0.3
2,677,898	-				+1.4
2,677,898	-				-0.2
2,677,898	-				+2.0
2,677,898	-				-0.7
2,677,898	-				-0.7
2,677,898	-				+0.9
2,677,912	+				+0.4
2,677,913	-				-0.7
2,677,913	-				-0.4
2,677,913	-				-1.4