Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2313

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
2,631,689	+				+0.4
2,631,707	-		Pf1N1B4_2311	0.10	-0.2
2,631,707	-		Pf1N1B4_2311	0.10	+0.8
2,631,936	-				+0.6
2,631,969	-				-0.5
2,632,056	-				-1.2
2,632,082	+				-0.1
2,632,082	+				+2.7
2,632,089	+				+1.7
2,632,649	+				+0.4
2,632,649	+				+3.0
2,632,650	-				-0.4
2,632,651	+				-0.8
2,632,651	+				+1.4
2,632,651	+				-0.1
2,632,651	+				-0.0
2,632,652	-				+0.7
2,632,652	-				-1.0
2,632,664	+				+0.3
2,632,665	-				-1.8
2,632,665	-				-0.6
2,632,902	+		Pf1N1B4_2313	0.14	+1.4
2,633,058	+		Pf1N1B4_2313	0.24	+1.4
2,633,073	+		Pf1N1B4_2313	0.25	+1.4
2,633,074	-		Pf1N1B4_2313	0.25	-0.3
2,633,269	-		Pf1N1B4_2313	0.37	-0.8
2,633,269	-		Pf1N1B4_2313	0.37	+0.2
2,633,316	+		Pf1N1B4_2313	0.40	-0.3
2,633,316	+		Pf1N1B4_2313	0.40	-0.9
2,633,316	+		Pf1N1B4_2313	0.40	-0.7
2,633,317	-		Pf1N1B4_2313	0.40	+1.4
2,633,317	-				+2.4
2,633,317	-		Pf1N1B4_2313	0.40	-1.8
2,633,317	-		Pf1N1B4_2313	0.40	-0.6
2,633,317	-		Pf1N1B4_2313	0.40	-1.6
2,633,317	-		Pf1N1B4_2313	0.40	-0.2
2,633,338	-		Pf1N1B4_2313	0.41	-1.8
2,633,381	+		Pf1N1B4_2313	0.44	+0.7
2,633,480	+		Pf1N1B4_2313	0.50	-0.6
2,633,480	+		Pf1N1B4_2313	0.50	-1.2
2,633,481	-		Pf1N1B4_2313	0.50	-1.4
2,633,481	-		Pf1N1B4_2313	0.50	+0.4
2,633,481	-		Pf1N1B4_2313	0.50	-0.0
2,633,484	+		Pf1N1B4_2313	0.51	-0.9
2,633,484	+		Pf1N1B4_2313	0.51	+0.8
2,633,484	+		Pf1N1B4_2313	0.51	-0.2
2,633,485	-		Pf1N1B4_2313	0.51	-1.4
2,633,503	+		Pf1N1B4_2313	0.52	-0.9
2,633,504	-		Pf1N1B4_2313	0.52	+2.4
2,633,607	+		Pf1N1B4_2313	0.58	-0.5
2,633,607	+		Pf1N1B4_2313	0.58	-1.2
2,633,607	+		Pf1N1B4_2313	0.58	+0.8
2,633,607	+		Pf1N1B4_2313	0.58	-0.9
2,633,986	+		Pf1N1B4_2313	0.82	-0.2
2,633,986	+		Pf1N1B4_2313	0.82	-1.1
2,633,986	+		Pf1N1B4_2313	0.82	+1.4
2,633,986	+		Pf1N1B4_2313	0.82	-1.0
2,633,986	+		Pf1N1B4_2313	0.82	-0.7
2,633,986	+		Pf1N1B4_2313	0.82	-1.0
2,633,987	-		Pf1N1B4_2313	0.82	-0.6
2,633,987	-		Pf1N1B4_2313	0.82	-0.5
2,633,987	-		Pf1N1B4_2313	0.82	-1.4
2,633,987	-		Pf1N1B4_2313	0.82	-0.1
2,633,987	-		Pf1N1B4_2313	0.82	-0.2
2,634,027	+		Pf1N1B4_2313	0.85	-1.0
2,634,027	+		Pf1N1B4_2313	0.85	-0.6
2,634,028	-		Pf1N1B4_2313	0.85	+0.2
2,634,039	+		Pf1N1B4_2313	0.85	-1.6
2,634,039	+		Pf1N1B4_2313	0.85	-0.6
2,634,040	-		Pf1N1B4_2313	0.85	-0.9
2,634,040	-		Pf1N1B4_2313	0.85	+0.7
2,634,040	-		Pf1N1B4_2313	0.85	+0.1
2,634,104	+		Pf1N1B4_2313	0.89	-1.3
2,634,104	+		Pf1N1B4_2313	0.89	-0.4
2,634,104	+		Pf1N1B4_2313	0.89	+0.1
2,634,105	-		Pf1N1B4_2313	0.90	-0.6
2,634,105	-		Pf1N1B4_2313	0.90	+1.4
2,634,105	-		Pf1N1B4_2313	0.90	-0.2
2,634,105	-		Pf1N1B4_2313	0.90	+0.5
2,634,105	-		Pf1N1B4_2313	0.90	-0.4
2,634,105	-		Pf1N1B4_2313	0.90	-0.9
2,634,105	-		Pf1N1B4_2313	0.90	+1.2
2,634,105	-		Pf1N1B4_2313	0.90	+0.6
2,634,111	+		Pf1N1B4_2313	0.90	-1.4
2,634,112	-				-0.6
2,634,112	-				+0.1
2,634,219	+				-0.6
2,634,220	-				+0.8
2,634,220	-				+0.1
2,634,220	-				+1.6
2,634,285	+				-0.6
2,634,285	+				-0.3
2,634,285	+				-0.1
2,634,288	+				+0.7
2,634,288	+				+0.2
2,634,288	+				-0.2
2,634,288	+				+0.6
2,634,289	-				+0.9
2,634,482	-		Pf1N1B4_2314	0.10	-0.2
2,634,845	+		Pf1N1B4_2314	0.77	-1.4
2,634,845	+		Pf1N1B4_2314	0.77	+0.7
2,634,846	-		Pf1N1B4_2314	0.77	+0.4
2,634,876	+		Pf1N1B4_2314	0.82	-0.5
2,634,920	+				-0.2
2,634,920	+				+1.0
2,634,921	-				-0.9
2,634,921	-				-1.0
2,634,921	-				+0.6
2,634,921	-				-0.9
2,634,972	+				+2.7
2,634,972	+				-0.2
2,634,973	-				+1.4
2,634,978	+				+0.5
2,634,979	-				-0.0
2,634,979	-				+1.0
2,635,042	-				+0.9
2,635,042	-				+0.3
2,635,055	+				+1.4
2,635,055	+				+0.4
2,635,055	+				-0.9
2,635,056	-				+0.2
2,635,139	+				+0.4