Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2208

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
2,519,544	+				-0.9
2,519,544	+				+1.5
2,519,544	+				-0.9
2,519,544	+				-0.9
2,519,545	-				+1.0
2,519,822	-		Pf1N1B4_2207	0.37	-0.5
2,519,848	+		Pf1N1B4_2207	0.39	+1.7
2,519,888	+		Pf1N1B4_2207	0.43	-0.2
2,519,888	+		Pf1N1B4_2207	0.43	-0.3
2,519,888	+		Pf1N1B4_2207	0.43	+0.4
2,519,888	+		Pf1N1B4_2207	0.43	-0.1
2,519,906	-		Pf1N1B4_2207	0.45	-0.2
2,519,924	-		Pf1N1B4_2207	0.47	-0.1
2,520,053	+		Pf1N1B4_2207	0.59	+1.9
2,520,054	-		Pf1N1B4_2207	0.60	-0.5
2,520,054	-		Pf1N1B4_2207	0.60	-0.9
2,520,065	+		Pf1N1B4_2207	0.61	-0.3
2,520,065	+		Pf1N1B4_2207	0.61	+0.7
2,520,065	+		Pf1N1B4_2207	0.61	-0.4
2,520,077	+		Pf1N1B4_2207	0.62	+1.8
2,520,077	+		Pf1N1B4_2207	0.62	-0.5
2,520,077	+		Pf1N1B4_2207	0.62	+0.5
2,520,078	-		Pf1N1B4_2207	0.62	-0.1
2,520,080	+		Pf1N1B4_2207	0.62	+0.1
2,520,143	+		Pf1N1B4_2207	0.68	+1.5
2,520,143	+		Pf1N1B4_2207	0.68	+2.1
2,520,143	+		Pf1N1B4_2207	0.68	-0.1
2,520,144	-		Pf1N1B4_2207	0.68	+0.0
2,520,242	+		Pf1N1B4_2207	0.78	-1.3
2,520,242	+		Pf1N1B4_2207	0.78	+1.1
2,520,277	+		Pf1N1B4_2207	0.82	+0.7
2,520,277	+		Pf1N1B4_2207	0.82	-0.5
2,520,277	+		Pf1N1B4_2207	0.82	+0.5
2,520,278	-		Pf1N1B4_2207	0.82	-0.1
2,520,296	+		Pf1N1B4_2207	0.83	+0.4
2,520,296	+		Pf1N1B4_2207	0.83	+1.5
2,520,296	+		Pf1N1B4_2207	0.83	+0.7
2,520,296	+		Pf1N1B4_2207	0.83	+0.9
2,520,296	+		Pf1N1B4_2207	0.83	-1.1
2,520,296	+		Pf1N1B4_2207	0.83	+0.9
2,520,296	+		Pf1N1B4_2207	0.83	-0.0
2,520,314	+		Pf1N1B4_2207	0.85	+0.1
2,520,314	+		Pf1N1B4_2207	0.85	+0.9
2,520,314	+		Pf1N1B4_2207	0.85	+0.3
2,520,314	+		Pf1N1B4_2207	0.85	-0.9
2,520,314	+		Pf1N1B4_2207	0.85	-0.3
2,520,388	+				-0.2
2,520,419	+				+0.8
2,520,419	+				+0.9
2,520,419	+				-0.5
2,520,419	+				-0.4
2,520,419	+				+2.5
2,520,419	+				+2.1
2,520,419	+				+0.1
2,520,419	+				+1.1
2,520,420	-				-0.5
2,520,420	-				-0.5
2,520,420	-				-0.5
2,520,461	+				+1.1
2,520,461	+				-1.3
2,520,650	+				-0.1
2,520,650	+				+0.7
2,520,651	-				-1.3
2,520,651	-				-2.0
2,520,651	-				+1.2
2,520,651	-				-1.5
2,521,232	+		Pf1N1B4_2208	0.34	-1.5
2,521,232	+		Pf1N1B4_2208	0.34	-1.3
2,521,232	+		Pf1N1B4_2208	0.34	-1.5
2,521,232	+		Pf1N1B4_2208	0.34	-1.5
2,521,232	+		Pf1N1B4_2208	0.34	-0.5
2,521,233	-		Pf1N1B4_2208	0.34	-1.5
2,521,233	-		Pf1N1B4_2208	0.34	-0.1
2,521,460	+		Pf1N1B4_2208	0.44	-0.7
2,521,499	+		Pf1N1B4_2208	0.46	-1.1
2,521,499	+		Pf1N1B4_2208	0.46	-2.6
2,521,500	-		Pf1N1B4_2208	0.46	-2.2
2,521,574	+		Pf1N1B4_2208	0.49	-0.9
2,521,574	+				-0.1
2,521,575	-		Pf1N1B4_2208	0.49	-2.3
2,521,575	-		Pf1N1B4_2208	0.49	+0.5
2,521,751	+		Pf1N1B4_2208	0.57	-0.1
2,521,752	-		Pf1N1B4_2208	0.57	+1.1
2,521,792	-		Pf1N1B4_2208	0.59	-1.3
2,521,910	+		Pf1N1B4_2208	0.64	-1.6
2,522,010	-		Pf1N1B4_2208	0.69	-1.0
2,522,042	+		Pf1N1B4_2208	0.70	-1.1
2,522,043	-		Pf1N1B4_2208	0.70	+0.6
2,522,279	+		Pf1N1B4_2208	0.81	-2.4
2,522,280	-		Pf1N1B4_2208	0.81	+0.5
2,522,280	-		Pf1N1B4_2208	0.81	-2.4
2,522,420	+		Pf1N1B4_2208	0.87	+0.5
2,522,421	-		Pf1N1B4_2208	0.87	+0.1
2,522,561	+				-0.9
2,522,660	-				-0.1
2,522,707	+				-0.1
2,522,707	+				-0.3
2,522,707	+				-0.4
2,522,707	+				+0.6
2,522,707	+				-2.1
2,522,708	-				-1.1
2,523,011	+				+0.3
2,523,011	+				+1.1
2,523,012	-				+0.3
2,523,012	-				+1.9
2,523,012	-				+2.2
2,523,012	-				+0.3
2,523,012	-				+0.5
2,523,225	+		Pf1N1B4_2209	0.23	+1.2
2,523,226	-		Pf1N1B4_2209	0.23	+0.2
2,523,226	-		Pf1N1B4_2209	0.23	+0.8
2,523,243	+		Pf1N1B4_2209	0.24	+1.0
2,523,244	-		Pf1N1B4_2209	0.24	-0.5
2,523,244	-		Pf1N1B4_2209	0.24	+1.5
2,523,249	+		Pf1N1B4_2209	0.25	+0.3
2,523,249	+		Pf1N1B4_2209	0.25	+0.8
2,523,250	-		Pf1N1B4_2209	0.25	+0.9
2,523,250	-		Pf1N1B4_2209	0.25	+2.2
2,523,250	-		Pf1N1B4_2209	0.25	+1.5
2,523,474	+		Pf1N1B4_2209	0.40	-0.5
2,523,474	+		Pf1N1B4_2209	0.40	+0.1
2,523,475	-		Pf1N1B4_2209	0.40	-0.9
2,523,475	-		Pf1N1B4_2209	0.40	+0.5