Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1743

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
1,991,104	-		Pf1N1B4_1741	0.83	+0.7
1,991,118	+		Pf1N1B4_1741	0.84	+0.0
1,991,149	-		Pf1N1B4_1741	0.86	-1.5
1,991,154	+		Pf1N1B4_1741	0.86	-0.5
1,991,154	+		Pf1N1B4_1741	0.86	+0.9
1,991,154	+		Pf1N1B4_1741	0.86	-0.4
1,991,387	-				+0.2
1,991,470	+				+1.5
1,991,470	+				-0.5
1,991,470	+				-0.6
1,991,470	+				-0.1
1,991,471	-				+1.5
1,991,471	-				-0.6
1,991,471	-				+0.9
1,991,471	-				+0.3
1,991,473	-				-0.3
1,991,491	+				+1.8
1,991,491	+				+1.2
1,991,540	+				+0.4
1,991,540	+				+1.9
1,991,541	-				-0.5
1,991,541	-				+1.1
1,991,629	+		Pf1N1B4_1742	0.17	+0.9
1,991,629	+				+0.5
1,991,694	+		Pf1N1B4_1742	0.29	+0.7
1,991,886	-				+0.5
1,991,886	-		Pf1N1B4_1742	0.66	+0.6
1,991,886	-		Pf1N1B4_1742	0.66	+0.5
1,991,977	+		Pf1N1B4_1742	0.83	+1.5
1,991,978	-		Pf1N1B4_1742	0.83	-1.8
1,991,978	-		Pf1N1B4_1742	0.83	-2.2
1,991,978	-		Pf1N1B4_1742	0.83	-0.2
1,991,978	-		Pf1N1B4_1742	0.83	+0.7
1,991,978	-		Pf1N1B4_1742	0.83	-1.3
1,991,981	+		Pf1N1B4_1742	0.84	-1.3
1,991,981	+		Pf1N1B4_1742	0.84	+0.2
1,991,982	-		Pf1N1B4_1742	0.84	-0.5
1,991,982	-		Pf1N1B4_1742	0.84	-1.3
1,991,982	-		Pf1N1B4_1742	0.84	-1.3
1,991,982	-		Pf1N1B4_1742	0.84	+1.3
1,991,982	-		Pf1N1B4_1742	0.84	+1.5
1,992,183	-				-1.7
1,992,183	-				-1.9
1,992,895	+		Pf1N1B4_1743	0.61	-0.8
1,992,896	-		Pf1N1B4_1743	0.61	-0.9
1,992,896	-		Pf1N1B4_1743	0.61	-1.1
1,993,168	+		Pf1N1B4_1743	0.81	-0.4
1,993,168	+		Pf1N1B4_1743	0.81	-1.7
1,993,168	+		Pf1N1B4_1743	0.81	+0.2
1,993,168	+		Pf1N1B4_1743	0.81	-1.8
1,993,168	+		Pf1N1B4_1743	0.81	-1.1
1,993,169	-		Pf1N1B4_1743	0.82	+1.5
1,993,169	-		Pf1N1B4_1743	0.82	-0.8
1,993,169	-		Pf1N1B4_1743	0.82	-0.3
1,993,169	-		Pf1N1B4_1743	0.82	-1.2
1,993,223	+		Pf1N1B4_1743	0.86	+0.3
1,993,224	-		Pf1N1B4_1743	0.86	-0.2
1,993,224	-		Pf1N1B4_1743	0.86	-1.1
1,993,224	-		Pf1N1B4_1743	0.86	-1.3
1,993,267	+		Pf1N1B4_1743	0.89	-1.3
1,993,268	-		Pf1N1B4_1743	0.89	-0.6
1,993,401	+				-0.5
1,993,402	-				+1.2
1,993,421	+				-1.7
1,993,421	+				-1.3
1,993,500	-				-0.8
1,993,737	-		Pf1N1B4_1744	0.14	+0.5
1,993,827	+		Pf1N1B4_1744	0.19	+2.5
1,993,827	+		Pf1N1B4_1744	0.19	-1.3
1,993,827	+		Pf1N1B4_1744	0.19	+1.1
1,993,828	-		Pf1N1B4_1744	0.19	+0.8
1,993,975	+		Pf1N1B4_1744	0.26	+1.5
1,994,036	-		Pf1N1B4_1744	0.29	-0.4
1,994,036	-		Pf1N1B4_1744	0.29	-0.2
1,994,077	+		Pf1N1B4_1744	0.31	+1.9
1,994,077	+		Pf1N1B4_1744	0.31	-0.1
1,994,131	+		Pf1N1B4_1744	0.34	-1.5
1,994,131	+		Pf1N1B4_1744	0.34	-0.3
1,994,132	-		Pf1N1B4_1744	0.34	+0.2
1,994,233	+		Pf1N1B4_1744	0.39	+2.5
1,994,233	+		Pf1N1B4_1744	0.39	+1.1
1,994,233	+		Pf1N1B4_1744	0.39	-0.1
1,994,285	+		Pf1N1B4_1744	0.42	-0.5
1,994,320	+		Pf1N1B4_1744	0.44	-1.1
1,994,321	-		Pf1N1B4_1744	0.44	-0.5
1,994,321	-		Pf1N1B4_1744	0.44	-0.8
1,994,321	-		Pf1N1B4_1744	0.44	+1.4