Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1708

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
1,955,237	-				-0.1
1,955,291	-				+0.5
1,955,291	-		Pf1N1B4_1707	0.54	-0.1
1,955,300	+		Pf1N1B4_1707	0.55	+0.5
1,955,300	+		Pf1N1B4_1707	0.55	-0.7
1,955,300	+		Pf1N1B4_1707	0.55	+0.7
1,955,301	-		Pf1N1B4_1707	0.55	-0.2
1,955,301	-		Pf1N1B4_1707	0.55	-0.3
1,955,301	-		Pf1N1B4_1707	0.55	-0.5
1,955,301	-		Pf1N1B4_1707	0.55	-1.3
1,955,812	+				-1.8
1,955,813	-				+0.2
1,955,813	-				-1.5
1,955,813	-				-2.3
1,955,813	-				+0.3
1,955,853	+				+2.5
1,955,853	+				+1.2
1,955,853	+				+1.5
1,955,854	-				+0.3
1,956,221	+		Pf1N1B4_1708	0.40	-0.8
1,956,254	-		Pf1N1B4_1708	0.43	+1.5
1,956,254	-		Pf1N1B4_1708	0.43	+0.7
1,956,318	+		Pf1N1B4_1708	0.49	-2.8
1,956,318	+		Pf1N1B4_1708	0.49	-1.3
1,956,319	-		Pf1N1B4_1708	0.49	-0.6
1,956,319	-		Pf1N1B4_1708	0.49	+1.2
1,956,319	-		Pf1N1B4_1708	0.49	+0.5
1,956,319	-		Pf1N1B4_1708	0.49	-0.5
1,956,385	+		Pf1N1B4_1708	0.55	-2.1
1,956,386	-		Pf1N1B4_1708	0.55	-0.4
1,956,475	+		Pf1N1B4_1708	0.63	-1.4
1,956,476	-		Pf1N1B4_1708	0.63	-1.3
1,956,493	+		Pf1N1B4_1708	0.64	-0.8
1,956,903	+				+0.1
1,956,903	+				-0.4
1,956,903	+				-0.9
1,956,903	+				+0.3
1,956,903	+				+0.9
1,956,903	+				+0.5
1,956,904	-				-1.0
1,956,923	+				-1.1
1,956,923	+				-1.6
1,956,923	+				+0.4
1,956,937	+				-0.5
1,956,937	+				+0.2
1,956,937	+				-1.1
1,956,937	+				-1.5
1,956,938	-				-0.5
1,956,938	-				+1.1
1,956,971	+				+2.0
1,956,971	+				+0.8
1,956,971	+				-0.5
1,956,972	-				-0.3
1,956,972	-				+0.5
1,956,973	+				-0.8
1,956,973	+				-1.8
1,956,973	+				-1.3
1,956,973	+				-1.3
1,956,973	+				-0.8
1,956,973	+				+0.5
1,956,974	-				+0.9
1,956,974	-				+0.2
1,956,974	-				-0.1
1,956,974	-				+0.9
1,956,974	-				+0.8
1,957,139	+				+0.3
1,957,139	+				+0.1
1,957,140	-				+0.5
1,957,326	-		Pf1N1B4_1709	0.19	-1.3
1,957,326	-		Pf1N1B4_1709	0.19	-0.7
1,957,413	+		Pf1N1B4_1709	0.27	+0.5
1,957,414	-				-0.8
1,957,414	-		Pf1N1B4_1709	0.27	-1.4
1,957,461	+		Pf1N1B4_1709	0.31	+0.6
1,957,461	+		Pf1N1B4_1709	0.31	+0.8
1,957,462	-		Pf1N1B4_1709	0.31	-0.1
1,957,588	+		Pf1N1B4_1709	0.42	-0.9
1,957,588	+		Pf1N1B4_1709	0.42	+0.1
1,957,699	-		Pf1N1B4_1709	0.51	+0.3
1,957,881	-		Pf1N1B4_1709	0.67	+0.0