Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1664

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
1,907,079	-				+1.0
1,907,079	-				+0.0
1,907,098	+				-0.8
1,907,109	+				-1.1
1,907,109	+				-0.1
1,907,109	+				+1.1
1,907,109	+				+1.5
1,907,110	-				-1.0
1,907,110	-				-0.1
1,907,110	-				+0.5
1,907,110	-				+1.4
1,907,110	-				+1.0
1,907,110	-				+1.5
1,907,110	-				+1.7
1,907,110	-				+0.2
1,907,110	-				-0.3
1,907,111	+				-0.5
1,907,112	-				+1.2
1,907,112	-				-0.7
1,907,145	+				-1.5
1,907,146	-				+0.1
1,907,146	-				-1.9
1,907,147	+				-0.6
1,907,147	+				+0.9
1,907,148	-				+0.3
1,907,210	+				+0.5
1,907,210	+				+0.0
1,907,253	+				+1.5
1,907,253	+				+0.5
1,907,253	+				-0.8
1,907,253	+				+1.0
1,907,253	+				+1.1
1,907,254	-				+0.5
1,907,254	-				-2.0
1,907,254	-				+0.3
1,907,254	-				+0.9
1,907,254	-				+0.9
1,907,254	-				+2.0
1,907,254	-				-1.3
1,907,254	-				-0.9
1,907,428	+				-0.5
1,907,466	-				-0.5
1,907,466	-				+0.5
1,907,537	+				+0.1
1,907,537	+				+1.5
1,907,537	+				+1.7
1,907,537	+				+0.4
1,907,537	+				-0.5
1,907,537	+				-0.3
1,907,538	-				-0.0
1,907,538	-				-0.5
1,907,538	-				+1.5
1,907,538	-				-2.9
1,907,538	-				+1.2
1,907,547	+				-1.7
1,907,547	+				-0.1
1,907,577	-				-0.2
1,907,586	+				+0.5
1,907,626	+				+0.2
1,907,626	+				+0.3
1,907,627	-				+2.3
1,907,627	-				+0.9
1,907,641	+				-0.1
1,907,642	-				+0.9
1,907,642	-				+0.5
1,907,677	+				+0.5
1,907,678	-				+0.1
1,907,785	+				-1.5
1,907,785	+				-0.5
1,907,785	+				-2.5
1,907,786	-				-0.2
1,907,786	-				+0.0
1,907,786	-				+0.9
1,907,803	+				+2.8
1,907,804	-				-0.9
1,907,848	+				+0.7
1,907,848	+				+1.0
1,907,926	-				+0.9
1,907,948	-				+1.1
1,907,948	-				-2.0
1,907,972	+				+0.2
1,907,972	+				+0.1
1,907,972	+				+0.7
1,907,972	+				+1.5
1,907,973	-				+0.0
1,907,973	-				-0.1
1,907,973	-				-0.6
1,907,973	-				-0.1
1,908,017	+				+0.6
1,908,017	+				-1.3
1,908,017	+				+0.6
1,908,017	+				+0.7
1,908,017	+				+0.1
1,908,017	+				-0.9
1,908,017	+				+0.3
1,908,018	-				+0.5
1,908,018	-				+0.1
1,908,018	-				-1.3
1,908,018	-				-0.1
1,908,018	-				-0.1
1,908,018	-				+0.3
1,908,018	-				-0.1
1,908,018	-				+0.5
1,908,043	+		Pf1N1B4_1664	0.14	+1.2
1,908,043	+		Pf1N1B4_1664	0.14	+0.3
1,908,043	+		Pf1N1B4_1664	0.14	+1.0
1,908,043	+		Pf1N1B4_1664	0.14	+0.5
1,908,044	-		Pf1N1B4_1664	0.14	-1.1
1,908,044	-		Pf1N1B4_1664	0.14	+1.2
1,908,134	+		Pf1N1B4_1664	0.31	-0.7
1,908,151	+		Pf1N1B4_1664	0.34	-0.9
1,908,355	+		Pf1N1B4_1664	0.71	+1.1
1,908,356	-		Pf1N1B4_1664	0.72	+0.5
1,908,370	+		Pf1N1B4_1664	0.74	-1.1
1,908,370	+		Pf1N1B4_1664	0.74	+0.1
1,908,370	+		Pf1N1B4_1664	0.74	+1.5
1,908,370	+		Pf1N1B4_1664	0.74	+0.9
1,908,371	-		Pf1N1B4_1664	0.74	-0.5
1,908,373	+		Pf1N1B4_1664	0.75	-0.1
1,908,373	+		Pf1N1B4_1664	0.75	-2.0
1,908,373	+		Pf1N1B4_1664	0.75	+1.5
1,908,373	+		Pf1N1B4_1664	0.75	+0.3
1,908,373	+		Pf1N1B4_1664	0.75	+1.1
1,908,374	-		Pf1N1B4_1664	0.75	+2.0
1,908,374	-		Pf1N1B4_1664	0.75	-0.3
1,908,455	+		Pf1N1B4_1664	0.90	-0.5
1,908,455	+		Pf1N1B4_1664	0.90	-2.2
1,908,456	-				-1.3
1,908,456	-				-0.6
1,908,584	+				+0.8
1,908,584	+				-0.1
1,908,584	+				+0.3
1,908,585	-				-0.4
1,908,585	-				+0.1
1,908,593	+				+0.1
1,908,593	+				+1.0
1,908,594	-				+0.0
1,908,595	+				-0.9
1,908,596	-				+1.8
1,908,722	+				+1.3
1,908,800	+				-1.1
1,908,938	+		Pf1N1B4_1665	0.15	+0.6
1,908,938	+		Pf1N1B4_1665	0.15	-0.7
1,908,938	+		Pf1N1B4_1665	0.15	-0.8
1,908,938	+		Pf1N1B4_1665	0.15	-0.1
1,908,938	+		Pf1N1B4_1665	0.15	+0.8
1,908,938	+		Pf1N1B4_1665	0.15	+1.0
1,908,938	+		Pf1N1B4_1665	0.15	+1.5
1,908,938	+		Pf1N1B4_1665	0.15	-0.5
1,908,939	-		Pf1N1B4_1665	0.15	-0.1
1,908,939	-		Pf1N1B4_1665	0.15	-1.9
1,908,939	-		Pf1N1B4_1665	0.15	+0.2
1,908,939	-		Pf1N1B4_1665	0.15	+0.1
1,909,028	+		Pf1N1B4_1665	0.20	-0.5
1,909,028	+		Pf1N1B4_1665	0.20	+1.0
1,909,028	+		Pf1N1B4_1665	0.20	+0.9
1,909,029	-		Pf1N1B4_1665	0.20	-0.9
1,909,100	+		Pf1N1B4_1665	0.24	-0.5
1,909,101	-		Pf1N1B4_1665	0.25	+1.5
1,909,491	+		Pf1N1B4_1665	0.47	+0.0
1,909,491	+		Pf1N1B4_1665	0.47	-0.2
1,909,492	-		Pf1N1B4_1665	0.47	+0.5