Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1052

Experiment: Choline Lysine 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 6 mM
1,187,189	+		Pf1N1B4_1050	0.88	+1.8
1,187,192	+		Pf1N1B4_1050	0.88	-0.4
1,187,192	+		Pf1N1B4_1050	0.88	-0.4
1,187,338	+				+1.0
1,187,338	+				-1.4
1,187,338	+				-1.4
1,187,339	-				+0.5
1,187,345	+				+2.8
1,187,346	-				+0.8
1,187,359	+				+0.2
1,187,389	-				+0.2
1,187,389	-				+0.6
1,187,396	+				-1.8
1,187,396	+				+0.6
1,187,396	+				-1.4
1,187,396	+				-0.4
1,187,396	+				+0.2
1,187,396	+				-0.4
1,187,397	-				+1.8
1,187,397	-				-0.4
1,187,397	-				-1.8
1,187,431	-				-0.8
1,187,475	+				-0.1
1,187,475	+				-0.8
1,187,476	-				+3.8
1,187,501	+				-1.1
1,187,599	+		Pf1N1B4_1051	0.12	-0.6
1,187,709	+		Pf1N1B4_1051	0.38	-0.4
1,187,709	+		Pf1N1B4_1051	0.38	+0.2
1,187,709	+		Pf1N1B4_1051	0.38	+0.5
1,187,710	-		Pf1N1B4_1051	0.38	-0.4
1,187,772	+		Pf1N1B4_1051	0.53	-0.4
1,187,772	+		Pf1N1B4_1051	0.53	+1.2
1,187,773	-		Pf1N1B4_1051	0.53	-0.3
1,187,773	-		Pf1N1B4_1051	0.53	+0.2
1,187,773	-		Pf1N1B4_1051	0.53	-0.8
1,187,874	+		Pf1N1B4_1051	0.76	+0.6
1,187,874	+		Pf1N1B4_1051	0.76	+0.3
1,187,874	+		Pf1N1B4_1051	0.76	-0.6
1,187,874	+		Pf1N1B4_1051	0.76	+0.6
1,187,874	+				-1.1
1,187,875	-		Pf1N1B4_1051	0.77	+1.2
1,187,875	-		Pf1N1B4_1051	0.77	+1.0
1,187,875	-		Pf1N1B4_1051	0.77	+0.5
1,187,875	-		Pf1N1B4_1051	0.77	+0.5
1,187,875	-		Pf1N1B4_1051	0.77	-1.0
1,187,875	-		Pf1N1B4_1051	0.77	+0.2
1,187,875	-		Pf1N1B4_1051	0.77	+0.2
1,187,904	+		Pf1N1B4_1051	0.83	+0.1
1,187,905	-		Pf1N1B4_1051	0.84	-0.4
1,187,978	+				+1.0
1,187,979	-				-0.5
1,187,979	-				+1.5
1,187,979	-				+0.2
1,187,979	-				-2.7
1,187,979	-				+0.1
1,188,100	-				-2.1
1,188,428	+		Pf1N1B4_1052	0.56	+1.2
1,188,429	-		Pf1N1B4_1052	0.57	-1.2
1,188,429	-		Pf1N1B4_1052	0.57	-0.4
1,188,454	+		Pf1N1B4_1052	0.62	-0.8
1,188,455	-		Pf1N1B4_1052	0.62	+1.6
1,188,455	-		Pf1N1B4_1052	0.62	-0.4
1,188,522	+		Pf1N1B4_1052	0.76	+0.1
1,188,539	+		Pf1N1B4_1052	0.79	+0.4
1,188,601	-				-1.8
1,188,601	-				+2.0
1,188,602	+				-0.4
1,188,603	-				-0.0
1,188,603	-				+2.2
1,188,621	+				+0.2
1,188,871	+		Pf1N1B4_1053	0.61	+1.6
1,188,871	+		Pf1N1B4_1053	0.61	+0.2
1,188,968	+				+0.4
1,189,283	+		Pf1N1B4_1054	0.33	-1.1
1,189,283	+		Pf1N1B4_1054	0.33	-0.5
1,189,352	+		Pf1N1B4_1054	0.41	+1.8
1,189,352	+		Pf1N1B4_1054	0.41	+0.9