Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15655

Experiment: soil sample 9; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 9; outgrowth in LB
3,300,952	+		ABZR87_RS15650	0.29	+0.0
3,300,953	-		ABZR87_RS15650	0.29	+0.5
3,301,070	+		ABZR87_RS15650	0.40	+0.5
3,301,124	-		ABZR87_RS15650	0.45	+1.3
3,301,124	-		ABZR87_RS15650	0.45	-0.2
3,301,159	+		ABZR87_RS15650	0.48	-0.8
3,301,159	+		ABZR87_RS15650	0.48	-1.4
3,301,159	+		ABZR87_RS15650	0.48	-0.6
3,301,160	-		ABZR87_RS15650	0.48	-0.5
3,301,186	+		ABZR87_RS15650	0.50	-0.0
3,301,186	+		ABZR87_RS15650	0.50	-2.5
3,301,187	-		ABZR87_RS15650	0.50	+0.1
3,301,187	-		ABZR87_RS15650	0.50	-1.3
3,301,187	-		ABZR87_RS15650	0.50	-0.0
3,301,198	+		ABZR87_RS15650	0.51	+0.7
3,301,199	-		ABZR87_RS15650	0.51	-0.4
3,301,333	+		ABZR87_RS15650	0.64	-0.2
3,301,334	-		ABZR87_RS15650	0.64	+0.1
3,301,387	+		ABZR87_RS15650	0.69	-0.5
3,301,388	-		ABZR87_RS15650	0.69	+1.2
3,301,408	+		ABZR87_RS15650	0.70	-1.3
3,301,408	+		ABZR87_RS15650	0.70	+0.1
3,301,408	+		ABZR87_RS15650	0.70	-0.9
3,301,408	+		ABZR87_RS15650	0.70	-0.8
3,301,408	+		ABZR87_RS15650	0.70	-1.6
3,301,408	+		ABZR87_RS15650	0.70	-2.4
3,301,409	-		ABZR87_RS15650	0.71	-0.1
3,301,409	-		ABZR87_RS15650	0.71	-2.0
3,301,409	-		ABZR87_RS15650	0.71	+0.0
3,301,409	-		ABZR87_RS15650	0.71	-1.5
3,301,496	+		ABZR87_RS15650	0.79	-0.0
3,301,496	+		ABZR87_RS15650	0.79	-0.3
3,301,497	-		ABZR87_RS15650	0.79	-0.5
3,301,507	+		ABZR87_RS15650	0.80	+0.1
3,301,507	+		ABZR87_RS15650	0.80	-0.2
3,301,507	+		ABZR87_RS15650	0.80	-0.1
3,301,508	-		ABZR87_RS15650	0.80	-0.4
3,301,567	+		ABZR87_RS15650	0.85	-0.0
3,301,567	+		ABZR87_RS15650	0.85	-0.2
3,301,567	+		ABZR87_RS15650	0.85	-0.4
3,301,568	-		ABZR87_RS15650	0.85	-0.9
3,301,568	-		ABZR87_RS15650	0.85	-1.3
3,301,568	-		ABZR87_RS15650	0.85	-0.6
3,301,568	-		ABZR87_RS15650	0.85	-0.3
3,301,568	-		ABZR87_RS15650	0.85	-0.2
3,301,569	+		ABZR87_RS15650	0.85	-0.5
3,301,570	-		ABZR87_RS15650	0.85	-0.5
3,301,709	-				+0.6
3,301,709	-				-0.3
3,301,709	-				-1.0
3,301,726	+				+0.4
3,301,727	-				-0.6
3,301,727	-				+0.1
3,301,729	+				+0.8
3,301,729	+				+0.4
3,301,729	+				+0.7
3,301,729	+				+0.3
3,301,729	+				-0.7
3,301,729	+				-0.7
3,301,729	+				+0.3
3,301,729	+				-1.6
3,301,729	+				+0.2
3,301,729	+				+0.5
3,301,729	+				-1.1
3,301,730	-				+0.1
3,301,730	-				-0.5
3,301,730	-				+0.0
3,301,730	-				+0.2
3,301,730	-				+1.1
3,301,746	+				+0.9
3,301,774	+				-1.0
3,301,775	-				-0.1
3,301,775	-				+1.4
3,301,775	-				+0.6
3,301,775	-				-0.4
3,301,775	-				-0.3
3,301,968	+		ABZR87_RS15655	0.14	-0.5
3,301,969	-		ABZR87_RS15655	0.14	-0.0
3,301,969	-		ABZR87_RS15655	0.14	-0.1
3,301,971	+		ABZR87_RS15655	0.14	-0.1
3,301,971	+		ABZR87_RS15655	0.14	+1.8
3,301,971	+		ABZR87_RS15655	0.14	-0.3
3,301,972	-		ABZR87_RS15655	0.14	-1.1
3,301,972	-		ABZR87_RS15655	0.14	-0.9
3,301,972	-		ABZR87_RS15655	0.14	+0.1
3,301,972	-		ABZR87_RS15655	0.14	-0.1
3,301,995	+		ABZR87_RS15655	0.16	-0.3
3,301,996	-		ABZR87_RS15655	0.16	-1.5
3,302,068	-		ABZR87_RS15655	0.24	+0.4
3,302,068	-		ABZR87_RS15655	0.24	+0.7
3,302,172	+		ABZR87_RS15655	0.34	-0.4
3,302,172	+		ABZR87_RS15655	0.34	-0.8
3,302,172	+		ABZR87_RS15655	0.34	+0.6
3,302,172	+		ABZR87_RS15655	0.34	-0.2
3,302,173	-		ABZR87_RS15655	0.34	-0.5
3,302,173	-		ABZR87_RS15655	0.34	+0.1
3,302,173	-		ABZR87_RS15655	0.34	-1.4
3,302,382	+		ABZR87_RS15655	0.55	+0.9
3,302,382	+		ABZR87_RS15655	0.55	-1.4
3,302,382	+		ABZR87_RS15655	0.55	-0.4
3,302,382	+		ABZR87_RS15655	0.55	-0.5
3,302,383	-		ABZR87_RS15655	0.56	-0.8
3,302,383	-		ABZR87_RS15655	0.56	-0.2
3,302,383	-		ABZR87_RS15655	0.56	+0.4
3,302,383	-		ABZR87_RS15655	0.56	-0.6
3,302,504	+		ABZR87_RS15655	0.68	-0.1
3,302,504	+		ABZR87_RS15655	0.68	+1.0
3,302,504	+		ABZR87_RS15655	0.68	+0.6
3,302,505	-		ABZR87_RS15655	0.68	-0.3
3,302,505	-		ABZR87_RS15655	0.68	-0.4
3,302,505	-		ABZR87_RS15655	0.68	+0.1
3,302,505	-		ABZR87_RS15655	0.68	+0.6
3,302,505	-		ABZR87_RS15655	0.68	-0.8
3,302,514	-		ABZR87_RS15655	0.69	-0.6
3,302,514	-		ABZR87_RS15655	0.69	-0.8
3,302,580	+		ABZR87_RS15655	0.75	+0.2
3,302,580	+		ABZR87_RS15655	0.75	+0.3
3,302,580	+		ABZR87_RS15655	0.75	-0.5
3,302,581	-		ABZR87_RS15655	0.76	-0.4
3,302,581	-		ABZR87_RS15655	0.76	-0.4
3,302,582	+		ABZR87_RS15655	0.76	+0.1
3,302,583	-		ABZR87_RS15655	0.76	-0.9
3,302,583	-		ABZR87_RS15655	0.76	-1.7
3,302,619	+		ABZR87_RS15655	0.79	-0.3
3,302,619	+		ABZR87_RS15655	0.79	-0.5
3,302,620	-		ABZR87_RS15655	0.79	+0.3
3,302,620	-		ABZR87_RS15655	0.79	-0.9
3,302,620	-		ABZR87_RS15655	0.79	-0.2
3,302,620	-		ABZR87_RS15655	0.79	-1.1
3,302,652	-		ABZR87_RS15655	0.83	+0.6
3,302,652	-		ABZR87_RS15655	0.83	-1.0
3,302,652	-		ABZR87_RS15655	0.83	+1.1
3,302,785	+				+0.1
3,302,785	+				+0.5
3,302,863	-				-0.2
3,302,863	-				+0.6
3,303,009	+		ABZR87_RS15660	0.19	+0.5
3,303,009	+		ABZR87_RS15660	0.19	-0.0
3,303,009	+		ABZR87_RS15660	0.19	-0.9
3,303,009	+		ABZR87_RS15660	0.19	+0.8
3,303,010	-		ABZR87_RS15660	0.19	-0.2
3,303,010	-		ABZR87_RS15660	0.19	-1.2
3,303,010	-		ABZR87_RS15660	0.19	-0.8
3,303,141	+		ABZR87_RS15660	0.33	-0.5
3,303,142	-		ABZR87_RS15660	0.34	-0.9
3,303,142	-		ABZR87_RS15660	0.34	-3.3
3,303,162	+		ABZR87_RS15660	0.36	+0.7
3,303,162	+		ABZR87_RS15660	0.36	-1.3
3,303,162	+		ABZR87_RS15660	0.36	-0.4
3,303,162	+		ABZR87_RS15660	0.36	-0.9
3,303,162	+		ABZR87_RS15660	0.36	-1.2
3,303,162	+		ABZR87_RS15660	0.36	+0.4
3,303,162	+		ABZR87_RS15660	0.36	-0.4
3,303,162	+		ABZR87_RS15660	0.36	-0.9
3,303,163	-		ABZR87_RS15660	0.36	-0.0
3,303,163	-		ABZR87_RS15660	0.36	+0.7
3,303,163	-		ABZR87_RS15660	0.36	-1.0
3,303,163	-		ABZR87_RS15660	0.36	-0.7
3,303,163	-		ABZR87_RS15660	0.36	+0.4
3,303,163	-		ABZR87_RS15660	0.36	-0.4
3,303,163	-		ABZR87_RS15660	0.36	-1.3
3,303,163	-		ABZR87_RS15660	0.36	+0.1
3,303,312	-		ABZR87_RS15660	0.53	+0.1
3,303,312	-		ABZR87_RS15660	0.53	-1.9
3,303,312	-		ABZR87_RS15660	0.53	-1.1
3,303,367	-		ABZR87_RS15660	0.59	+1.1
3,303,664	-				-1.7
3,303,664	-				+0.4
3,303,729	+				+0.8
3,303,730	-				-0.1
3,303,783	+				-0.4