Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS24360 and RR42_RS24365 are separated by 295 nucleotides
RR42_RS24360: RR42_RS24360 - MFS transporter, at 795,590 to 796,903
_RS24360
RR42_RS24365: RR42_RS24365 - hypothetical protein, at 797,199 to 797,696
_RS24365
Position (kb) 795
796
797 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 794.619 kb on + strand at 794.619 kb on + strand at 794.619 kb on + strand at 794.620 kb on - strand at 794.620 kb on - strand at 794.651 kb on + strand at 794.677 kb on - strand at 794.707 kb on + strand at 794.708 kb on - strand at 794.717 kb on - strand at 794.717 kb on - strand at 794.717 kb on - strand at 794.822 kb on - strand at 794.822 kb on - strand at 794.958 kb on + strand at 794.959 kb on - strand at 794.959 kb on - strand at 795.022 kb on + strand at 795.022 kb on + strand at 795.022 kb on + strand at 795.023 kb on - strand at 795.023 kb on - strand at 795.039 kb on - strand at 795.048 kb on + strand at 795.054 kb on + strand at 795.054 kb on + strand at 795.054 kb on + strand at 795.054 kb on + strand at 795.099 kb on + strand at 795.101 kb on + strand at 795.163 kb on + strand at 795.223 kb on + strand at 795.335 kb on + strand at 795.384 kb on + strand at 795.385 kb on - strand at 795.514 kb on + strand at 795.515 kb on - strand at 795.556 kb on + strand at 795.557 kb on - strand at 795.557 kb on - strand at 795.636 kb on - strand at 795.685 kb on - strand at 795.774 kb on - strand, within RR42_RS24360 at 795.830 kb on - strand, within RR42_RS24360 at 795.886 kb on - strand, within RR42_RS24360 at 795.964 kb on - strand, within RR42_RS24360 at 796.008 kb on - strand, within RR42_RS24360 at 796.008 kb on - strand, within RR42_RS24360 at 796.013 kb on + strand, within RR42_RS24360 at 796.014 kb on - strand, within RR42_RS24360 at 796.051 kb on + strand, within RR42_RS24360 at 796.106 kb on - strand, within RR42_RS24360 at 796.117 kb on + strand, within RR42_RS24360 at 796.117 kb on + strand, within RR42_RS24360 at 796.127 kb on + strand, within RR42_RS24360 at 796.127 kb on + strand, within RR42_RS24360 at 796.128 kb on - strand, within RR42_RS24360 at 796.205 kb on + strand, within RR42_RS24360 at 796.349 kb on + strand, within RR42_RS24360 at 796.350 kb on - strand, within RR42_RS24360 at 796.350 kb on - strand, within RR42_RS24360 at 796.380 kb on + strand, within RR42_RS24360 at 796.381 kb on - strand, within RR42_RS24360 at 796.381 kb on - strand, within RR42_RS24360 at 796.400 kb on - strand, within RR42_RS24360 at 796.464 kb on - strand, within RR42_RS24360 at 796.586 kb on - strand, within RR42_RS24360 at 796.610 kb on - strand, within RR42_RS24360 at 796.698 kb on - strand, within RR42_RS24360 at 796.817 kb on - strand at 796.826 kb on + strand at 796.874 kb on - strand at 796.878 kb on + strand at 796.878 kb on + strand at 796.878 kb on + strand at 796.878 kb on + strand at 796.916 kb on + strand at 796.916 kb on + strand at 796.917 kb on - strand at 796.917 kb on - strand at 796.996 kb on + strand at 796.996 kb on + strand at 796.997 kb on - strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.011 kb on + strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.012 kb on - strand at 797.063 kb on + strand at 797.063 kb on + strand at 797.063 kb on + strand at 797.097 kb on - strand at 797.134 kb on + strand at 797.135 kb on - strand at 797.135 kb on - strand at 797.201 kb on - strand at 797.333 kb on + strand, within RR42_RS24365 at 797.447 kb on - strand, within RR42_RS24365 at 797.557 kb on + strand, within RR42_RS24365 at 797.557 kb on + strand, within RR42_RS24365 at 797.558 kb on - strand, within RR42_RS24365 at 797.558 kb on - strand, within RR42_RS24365 at 797.558 kb on - strand, within RR42_RS24365 at 797.578 kb on + strand, within RR42_RS24365 at 797.578 kb on + strand, within RR42_RS24365 at 797.578 kb on + strand, within RR42_RS24365 at 797.578 kb on + strand, within RR42_RS24365 at 797.579 kb on - strand, within RR42_RS24365 at 797.579 kb on - strand, within RR42_RS24365 at 797.641 kb on + strand, within RR42_RS24365 at 797.641 kb on + strand, within RR42_RS24365 at 797.642 kb on - strand, within RR42_RS24365 at 797.642 kb on - strand, within RR42_RS24365 at 797.642 kb on - strand, within RR42_RS24365 at 797.651 kb on - strand at 797.797 kb on - strand at 797.797 kb on - strand at 797.807 kb on - strand at 797.838 kb on + strand at 797.838 kb on + strand at 797.839 kb on - strand at 797.839 kb on - strand at 797.884 kb on + strand at 797.884 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 794,619 + -0.6 794,619 + +0.8 794,619 + -0.1 794,620 - +0.3 794,620 - +0.2 794,651 + -0.1 794,677 - -0.4 794,707 + -0.1 794,708 - +0.1 794,717 - -0.6 794,717 - -0.5 794,717 - -0.9 794,822 - -1.3 794,822 - +0.2 794,958 + +0.5 794,959 - -0.1 794,959 - +0.3 795,022 + -0.2 795,022 + +0.2 795,022 + -1.0 795,023 - -0.2 795,023 - +0.2 795,039 - +0.1 795,048 + +0.2 795,054 + +0.1 795,054 + +0.2 795,054 + -0.1 795,054 + -0.4 795,099 + +0.7 795,101 + +1.1 795,163 + -1.2 795,223 + -0.2 795,335 + -0.8 795,384 + -0.7 795,385 - +0.5 795,514 + -1.2 795,515 - -0.2 795,556 + -0.5 795,557 - +0.4 795,557 - -0.8 795,636 - -0.3 795,685 - +0.1 795,774 - RR42_RS24360 0.14 -0.9 795,830 - RR42_RS24360 0.18 -0.5 795,886 - RR42_RS24360 0.23 +1.1 795,964 - RR42_RS24360 0.28 +0.1 796,008 - RR42_RS24360 0.32 -0.5 796,008 - RR42_RS24360 0.32 -0.3 796,013 + RR42_RS24360 0.32 -0.7 796,014 - RR42_RS24360 0.32 -0.6 796,051 + RR42_RS24360 0.35 -0.6 796,106 - RR42_RS24360 0.39 -0.2 796,117 + RR42_RS24360 0.40 -0.6 796,117 + RR42_RS24360 0.40 +0.4 796,127 + RR42_RS24360 0.41 +0.0 796,127 + RR42_RS24360 0.41 -0.5 796,128 - RR42_RS24360 0.41 -1.6 796,205 + RR42_RS24360 0.47 +0.1 796,349 + RR42_RS24360 0.58 +1.0 796,350 - RR42_RS24360 0.58 -0.4 796,350 - RR42_RS24360 0.58 -0.2 796,380 + RR42_RS24360 0.60 -0.7 796,381 - RR42_RS24360 0.60 -0.9 796,381 - RR42_RS24360 0.60 +0.6 796,400 - RR42_RS24360 0.62 -0.7 796,464 - RR42_RS24360 0.67 +0.4 796,586 - RR42_RS24360 0.76 +0.0 796,610 - RR42_RS24360 0.78 -0.5 796,698 - RR42_RS24360 0.84 +0.4 796,817 - +2.1 796,826 + +0.8 796,874 - -0.2 796,878 + +0.2 796,878 + -1.6 796,878 + +1.1 796,878 + -0.4 796,916 + +0.6 796,916 + -0.3 796,917 - +0.1 796,917 - +0.3 796,996 + -0.1 796,996 + -1.2 796,997 - -0.2 797,011 + +0.1 797,011 + -0.3 797,011 + -1.2 797,011 + -0.4 797,011 + -0.4 797,011 + +0.4 797,011 + +0.3 797,011 + +0.3 797,011 + -0.2 797,011 + -0.9 797,011 + -0.3 797,012 - +0.1 797,012 - +0.8 797,012 - -0.8 797,012 - -1.2 797,012 - +0.0 797,012 - +0.3 797,012 - -0.2 797,012 - -0.2 797,012 - -0.0 797,063 + +0.8 797,063 + +0.8 797,063 + +0.1 797,097 - -0.1 797,134 + -3.1 797,135 - +0.4 797,135 - -0.0 797,201 - -0.6 797,333 + RR42_RS24365 0.27 -0.3 797,447 - RR42_RS24365 0.50 +0.8 797,557 + RR42_RS24365 0.72 +0.3 797,557 + RR42_RS24365 0.72 +1.1 797,558 - RR42_RS24365 0.72 +1.2 797,558 - RR42_RS24365 0.72 +0.1 797,558 - RR42_RS24365 0.72 +1.8 797,578 + RR42_RS24365 0.76 +0.4 797,578 + RR42_RS24365 0.76 -0.2 797,578 + RR42_RS24365 0.76 -0.3 797,578 + RR42_RS24365 0.76 -0.2 797,579 - RR42_RS24365 0.76 -1.8 797,579 - RR42_RS24365 0.76 -0.3 797,641 + RR42_RS24365 0.89 -0.5 797,641 + RR42_RS24365 0.89 -0.2 797,642 - RR42_RS24365 0.89 +0.9 797,642 - RR42_RS24365 0.89 +0.1 797,642 - RR42_RS24365 0.89 -0.3 797,651 - -0.4 797,797 - +0.1 797,797 - -0.6 797,807 - +0.1 797,838 + -0.4 797,838 + -0.2 797,839 - +0.2 797,839 - -0.1 797,884 + -1.2 797,884 + +1.0
Or see this region's nucleotide sequence