Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2611

Experiment: 1-ethyl-3-methylimidazolium chloride 80 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 80 mM
2,948,052	+		Pf1N1B4_2609	0.79	-2.9
2,948,052	+		Pf1N1B4_2609	0.79	+1.3
2,948,052	+		Pf1N1B4_2609	0.79	-1.3
2,948,052	+		Pf1N1B4_2609	0.79	-2.4
2,948,053	-		Pf1N1B4_2609	0.79	-0.0
2,948,053	-		Pf1N1B4_2609	0.79	-0.8
2,948,053	-		Pf1N1B4_2609	0.79	+0.3
2,948,067	+		Pf1N1B4_2609	0.80	-1.3
2,948,067	+		Pf1N1B4_2609	0.80	-1.2
2,948,067	+		Pf1N1B4_2609	0.80	-0.3
2,948,067	+		Pf1N1B4_2609	0.80	-0.9
2,948,067	+		Pf1N1B4_2609	0.80	-0.7
2,948,067	+		Pf1N1B4_2609	0.80	-0.1
2,948,067	+		Pf1N1B4_2609	0.80	-0.0
2,948,067	+		Pf1N1B4_2609	0.80	-2.3
2,948,067	+		Pf1N1B4_2609	0.80	-1.1
2,948,067	+		Pf1N1B4_2609	0.80	-3.6
2,948,068	-		Pf1N1B4_2609	0.80	-0.2
2,948,068	-		Pf1N1B4_2609	0.80	-1.5
2,948,068	-		Pf1N1B4_2609	0.80	+2.7
2,948,068	-		Pf1N1B4_2609	0.80	-0.2
2,948,068	-		Pf1N1B4_2609	0.80	-0.2
2,948,068	-		Pf1N1B4_2609	0.80	-1.5
2,948,068	-		Pf1N1B4_2609	0.80	-0.9
2,948,097	+		Pf1N1B4_2609	0.82	-0.7
2,948,157	-		Pf1N1B4_2609	0.86	+0.3
2,948,163	+		Pf1N1B4_2609	0.87	-0.5
2,948,163	+		Pf1N1B4_2609	0.87	-0.7
2,948,163	+		Pf1N1B4_2609	0.87	-0.9
2,948,164	-		Pf1N1B4_2609	0.87	-0.2
2,948,164	-		Pf1N1B4_2609	0.87	-0.5
2,948,166	+		Pf1N1B4_2609	0.87	+0.1
2,948,166	+		Pf1N1B4_2609	0.87	+1.7
2,948,166	+		Pf1N1B4_2609	0.87	-0.7
2,948,166	+		Pf1N1B4_2609	0.87	+1.3
2,948,167	-		Pf1N1B4_2609	0.87	-0.1
2,948,167	-				-0.3
2,948,167	-		Pf1N1B4_2609	0.87	+0.5
2,948,167	-		Pf1N1B4_2609	0.87	-0.7
2,948,341	+				-1.4
2,948,348	+				+2.9
2,948,405	+				-0.9
2,948,406	-				-0.8
2,948,406	-				+0.1
2,948,406	-				-0.7
2,948,406	-				+0.1
2,948,406	-				+0.5
2,948,425	-				+0.3
2,948,425	-				+0.5
2,948,436	+				-2.0
2,948,437	-				-0.6
2,948,479	+				+0.6
2,948,479	+				-0.6
2,948,479	+				-0.3
2,948,480	-				-0.7
2,948,503	+				+0.5
2,948,503	+				-0.7
2,948,504	-				-0.3
2,948,504	-				+0.3
2,948,504	-				-0.0
2,948,504	-				+2.3
2,948,504	-				-1.9
2,948,529	+				-1.2
2,948,529	+				-1.9
2,948,530	-				+1.9
2,948,537	+				+0.5
2,948,582	+		Pf1N1B4_2610	0.15	+2.0
2,948,582	+		Pf1N1B4_2610	0.15	+0.4
2,948,582	+		Pf1N1B4_2610	0.15	+1.3
2,948,583	-		Pf1N1B4_2610	0.16	+1.3
2,948,603	+		Pf1N1B4_2610	0.20	-0.3
2,948,603	+		Pf1N1B4_2610	0.20	+0.3
2,948,603	+		Pf1N1B4_2610	0.20	+0.0
2,948,603	+		Pf1N1B4_2610	0.20	-1.5
2,948,603	+		Pf1N1B4_2610	0.20	+2.1
2,948,604	-		Pf1N1B4_2610	0.20	-0.0
2,948,604	-		Pf1N1B4_2610	0.20	-1.0
2,948,604	-		Pf1N1B4_2610	0.20	-0.7
2,948,604	-		Pf1N1B4_2610	0.20	+0.7
2,948,630	+		Pf1N1B4_2610	0.26	+0.4
2,948,631	-		Pf1N1B4_2610	0.26	-0.5
2,948,638	+				-0.3
2,948,638	+		Pf1N1B4_2610	0.28	-2.5
2,948,638	+		Pf1N1B4_2610	0.28	-0.0
2,948,638	+		Pf1N1B4_2610	0.28	+0.1
2,948,638	+		Pf1N1B4_2610	0.28	+2.3
2,948,639	-		Pf1N1B4_2610	0.28	+0.8
2,948,639	-		Pf1N1B4_2610	0.28	-0.7
2,948,692	+		Pf1N1B4_2610	0.39	+1.7
2,948,789	+		Pf1N1B4_2610	0.60	-1.2
2,948,789	+		Pf1N1B4_2610	0.60	+1.9
2,948,789	+		Pf1N1B4_2610	0.60	-0.0
2,948,789	+		Pf1N1B4_2610	0.60	-0.5
2,948,789	+		Pf1N1B4_2610	0.60	-0.5
2,948,790	-		Pf1N1B4_2610	0.60	-0.8
2,948,790	-		Pf1N1B4_2610	0.60	+0.1
2,948,790	-		Pf1N1B4_2610	0.60	+0.5
2,948,846	+		Pf1N1B4_2610	0.72	-0.7
2,948,846	+		Pf1N1B4_2610	0.72	+1.3
2,948,846	+		Pf1N1B4_2610	0.72	+0.4
2,948,846	+		Pf1N1B4_2610	0.72	+0.3
2,948,846	+		Pf1N1B4_2610	0.72	-0.6
2,948,846	+		Pf1N1B4_2610	0.72	+1.0
2,948,846	+		Pf1N1B4_2610	0.72	-1.3
2,948,846	+		Pf1N1B4_2610	0.72	+0.1
2,948,846	+		Pf1N1B4_2610	0.72	-1.5
2,948,846	+		Pf1N1B4_2610	0.72	-0.0
2,948,846	+		Pf1N1B4_2610	0.72	-0.9
2,948,846	+		Pf1N1B4_2610	0.72	-0.7
2,948,846	+		Pf1N1B4_2610	0.72	+1.6
2,948,847	-		Pf1N1B4_2610	0.72	+0.5
2,948,847	-		Pf1N1B4_2610	0.72	-1.0
2,948,847	-		Pf1N1B4_2610	0.72	+0.5
2,948,847	-		Pf1N1B4_2610	0.72	+0.7
2,948,847	-		Pf1N1B4_2610	0.72	-0.1
2,948,847	-		Pf1N1B4_2610	0.72	+0.7
2,948,903	+		Pf1N1B4_2610	0.85	-0.0
2,948,904	-		Pf1N1B4_2610	0.85	-0.2
2,948,954	+				-0.5
2,948,954	+				+1.0
2,948,954	+				-0.6
2,948,954	+				+0.3
2,948,954	+				-1.5
2,948,954	+				+0.3
2,948,955	-				+1.3
2,948,955	-				-0.0
2,948,955	-				+0.3
2,949,072	+				-2.2
2,949,072	+				-1.2
2,949,073	-				-0.7
2,949,227	-				-2.1
2,949,230	-				-1.3
2,949,254	+				+0.3
2,949,255	-				-1.3
2,949,296	-				+0.7
2,949,313	+				+0.3
2,949,314	-				-1.0
2,949,314	-				-1.9
2,949,314	-				-2.6
2,949,314	-				-1.4
2,949,315	+				-0.7
2,949,316	-				-0.6
2,949,316	-				-1.9
2,949,316	-				-2.8
2,949,417	+		Pf1N1B4_2611	0.13	-1.7
2,949,417	+		Pf1N1B4_2611	0.13	+0.3
2,949,417	+		Pf1N1B4_2611	0.13	-0.9
2,949,418	-		Pf1N1B4_2611	0.13	-0.7
2,949,418	-		Pf1N1B4_2611	0.13	-2.4
2,949,428	+		Pf1N1B4_2611	0.14	-1.5
2,949,428	+		Pf1N1B4_2611	0.14	-0.2
2,949,428	+		Pf1N1B4_2611	0.14	-1.5
2,949,428	+		Pf1N1B4_2611	0.14	-1.7
2,949,428	+		Pf1N1B4_2611	0.14	-1.9
2,949,428	+		Pf1N1B4_2611	0.14	-0.9
2,949,428	+		Pf1N1B4_2611	0.14	-1.4
2,949,429	-		Pf1N1B4_2611	0.14	-1.3
2,949,429	-		Pf1N1B4_2611	0.14	-1.5
2,949,537	+		Pf1N1B4_2611	0.18	+1.0
2,949,537	+		Pf1N1B4_2611	0.18	+0.1
2,949,538	-		Pf1N1B4_2611	0.18	+1.3
2,949,538	-		Pf1N1B4_2611	0.18	-1.5
2,949,538	-		Pf1N1B4_2611	0.18	-0.1
2,949,565	-		Pf1N1B4_2611	0.19	-0.7
2,949,594	-		Pf1N1B4_2611	0.20	-2.3
2,949,594	-		Pf1N1B4_2611	0.20	-2.4
2,949,597	+		Pf1N1B4_2611	0.20	-1.3
2,949,597	+		Pf1N1B4_2611	0.20	-0.7
2,949,597	+		Pf1N1B4_2611	0.20	-1.0
2,949,597	+		Pf1N1B4_2611	0.20	-0.9
2,949,597	+		Pf1N1B4_2611	0.20	+0.9
2,949,597	+		Pf1N1B4_2611	0.20	+1.3
2,949,597	+		Pf1N1B4_2611	0.20	-0.7
2,949,597	+		Pf1N1B4_2611	0.20	-1.3
2,949,597	+		Pf1N1B4_2611	0.20	-1.7
2,949,597	+		Pf1N1B4_2611	0.20	-1.0
2,949,597	+		Pf1N1B4_2611	0.20	+0.7
2,949,597	+		Pf1N1B4_2611	0.20	-1.0
2,949,597	+		Pf1N1B4_2611	0.20	-1.2
2,949,597	+		Pf1N1B4_2611	0.20	-2.2
2,949,597	+		Pf1N1B4_2611	0.20	-2.7
2,949,597	+		Pf1N1B4_2611	0.20	-1.9
2,949,598	-		Pf1N1B4_2611	0.20	+0.5
2,949,598	-		Pf1N1B4_2611	0.20	-2.0
2,949,598	-		Pf1N1B4_2611	0.20	-1.7
2,949,598	-		Pf1N1B4_2611	0.20	-1.0
2,949,598	-		Pf1N1B4_2611	0.20	-2.7
2,949,598	-		Pf1N1B4_2611	0.20	-1.3
2,949,598	-		Pf1N1B4_2611	0.20	+1.3
2,949,598	-		Pf1N1B4_2611	0.20	-2.6
2,949,598	-		Pf1N1B4_2611	0.20	-0.0
2,949,598	-		Pf1N1B4_2611	0.20	-1.0
2,949,598	-		Pf1N1B4_2611	0.20	-0.3
2,949,598	-		Pf1N1B4_2611	0.20	-0.3
2,949,598	-		Pf1N1B4_2611	0.20	+0.1
2,949,598	-		Pf1N1B4_2611	0.20	-1.5
2,949,598	-		Pf1N1B4_2611	0.20	-1.0
2,949,598	-				-1.0
2,949,598	-		Pf1N1B4_2611	0.20	-1.3
2,949,598	-		Pf1N1B4_2611	0.20	-1.9
2,949,598	-		Pf1N1B4_2611	0.20	-1.5
2,949,598	-		Pf1N1B4_2611	0.20	-1.9
2,949,598	-				-0.3
2,949,598	-		Pf1N1B4_2611	0.20	-0.6
2,949,598	-		Pf1N1B4_2611	0.20	-0.7
2,949,598	-		Pf1N1B4_2611	0.20	-2.1
2,949,598	-		Pf1N1B4_2611	0.20	-1.0
2,949,598	-		Pf1N1B4_2611	0.20	-1.9
2,949,623	+		Pf1N1B4_2611	0.21	+1.3
2,949,624	-		Pf1N1B4_2611	0.21	+0.7
2,949,624	-		Pf1N1B4_2611	0.21	+0.2
2,949,765	+		Pf1N1B4_2611	0.26	-1.7
2,949,765	+		Pf1N1B4_2611	0.26	-1.4
2,949,765	+		Pf1N1B4_2611	0.26	-1.5
2,949,765	+		Pf1N1B4_2611	0.26	-0.3
2,949,765	+		Pf1N1B4_2611	0.26	-1.5
2,949,765	+		Pf1N1B4_2611	0.26	-0.7
2,949,766	-		Pf1N1B4_2611	0.26	-0.5
2,949,766	-		Pf1N1B4_2611	0.26	+0.7
2,949,766	-		Pf1N1B4_2611	0.26	-1.0
2,949,847	+		Pf1N1B4_2611	0.29	+1.9
2,949,847	+		Pf1N1B4_2611	0.29	+0.6
2,949,848	-		Pf1N1B4_2611	0.29	+0.5
2,950,055	-		Pf1N1B4_2611	0.36	-0.9
2,950,105	-		Pf1N1B4_2611	0.38	-1.3
2,950,105	-		Pf1N1B4_2611	0.38	-1.0
2,950,105	-		Pf1N1B4_2611	0.38	-0.1
2,950,105	-		Pf1N1B4_2611	0.38	-0.7
2,950,178	+		Pf1N1B4_2611	0.40	-1.8
2,950,209	+		Pf1N1B4_2611	0.41	-1.5
2,950,209	+		Pf1N1B4_2611	0.41	+0.3
2,950,209	+		Pf1N1B4_2611	0.41	+0.3
2,950,210	-		Pf1N1B4_2611	0.41	-0.3
2,950,210	-		Pf1N1B4_2611	0.41	-1.5
2,950,210	-		Pf1N1B4_2611	0.41	-0.7
2,950,210	-		Pf1N1B4_2611	0.41	+0.8
2,950,210	-		Pf1N1B4_2611	0.41	-1.0
2,950,210	-		Pf1N1B4_2611	0.41	-1.2
2,950,347	+		Pf1N1B4_2611	0.46	-0.0
2,950,347	+		Pf1N1B4_2611	0.46	-0.0
2,950,347	+		Pf1N1B4_2611	0.46	-1.5
2,950,347	+		Pf1N1B4_2611	0.46	-0.3
2,950,347	+		Pf1N1B4_2611	0.46	+0.3
2,950,347	+		Pf1N1B4_2611	0.46	+0.7
2,950,348	-		Pf1N1B4_2611	0.46	-1.3
2,950,348	-		Pf1N1B4_2611	0.46	+0.3
2,950,348	-		Pf1N1B4_2611	0.46	+1.3
2,950,348	-		Pf1N1B4_2611	0.46	-0.0
2,950,348	-		Pf1N1B4_2611	0.46	-0.8
2,950,348	-		Pf1N1B4_2611	0.46	-1.9
2,950,348	-		Pf1N1B4_2611	0.46	-1.5
2,950,348	-		Pf1N1B4_2611	0.46	-0.0
2,950,447	-		Pf1N1B4_2611	0.50	-3.0
2,950,447	-		Pf1N1B4_2611	0.50	-0.7
2,950,797	+		Pf1N1B4_2611	0.62	-2.5
2,950,797	+		Pf1N1B4_2611	0.62	-2.0
2,950,894	-		Pf1N1B4_2611	0.65	-1.9
2,950,894	-		Pf1N1B4_2611	0.65	-0.7
2,950,926	+		Pf1N1B4_2611	0.67	-1.0
2,950,926	+		Pf1N1B4_2611	0.67	-0.4
2,950,926	+		Pf1N1B4_2611	0.67	-1.0
2,950,927	-		Pf1N1B4_2611	0.67	-1.0
2,950,929	+		Pf1N1B4_2611	0.67	-1.7
2,950,929	+		Pf1N1B4_2611	0.67	-0.9
2,950,929	+		Pf1N1B4_2611	0.67	-1.3
2,950,929	+		Pf1N1B4_2611	0.67	-0.7
2,951,348	+		Pf1N1B4_2611	0.81	-1.0
2,951,348	+		Pf1N1B4_2611	0.81	-2.2
2,951,349	-		Pf1N1B4_2611	0.82	-1.0
2,951,538	+		Pf1N1B4_2611	0.88	-1.0
2,951,539	-		Pf1N1B4_2611	0.88	-0.5
2,951,553	+		Pf1N1B4_2611	0.89	-1.3
2,951,553	+		Pf1N1B4_2611	0.89	-1.8
2,951,553	+		Pf1N1B4_2611	0.89	-0.7
2,951,554	-		Pf1N1B4_2611	0.89	+1.3
2,951,559	+		Pf1N1B4_2611	0.89	-2.3
2,951,559	+		Pf1N1B4_2611	0.89	-2.2
2,951,559	+		Pf1N1B4_2611	0.89	-1.5
2,951,559	+		Pf1N1B4_2611	0.89	+0.1
2,951,560	-		Pf1N1B4_2611	0.89	-0.3
2,951,694	+				-1.7
2,951,715	+				-1.7
2,951,736	+				-1.2
2,951,736	+				-0.7
2,951,903	+				-1.3
2,951,903	+				-0.7
2,951,904	-				+1.6
2,951,904	-				+0.7
2,951,909	+				-1.0
2,951,909	+				-0.3
2,951,909	+				+0.9
2,951,909	+				-0.2
2,951,909	+				-1.7
2,951,909	+				-1.5
2,951,910	-				+0.9
2,951,910	-				-0.5
2,951,910	-				+1.9
2,951,910	-				-0.0
2,951,911	+				+0.3
2,951,921	+				-0.9
2,951,922	-				+1.1
2,951,995	-				+0.9
2,951,995	-				+0.3
2,951,995	-				-0.5
2,952,007	+				-2.7
2,952,007	+				-0.3
2,952,007	+				+0.9
2,952,007	+				-0.9
2,952,008	-				-0.8
2,952,031	+				+0.6
2,952,031	+				-2.3
2,952,144	+				+0.3
2,952,184	+				-1.7
2,952,185	-				+1.3
2,952,316	+		Pf1N1B4_2612	0.18	-1.0
2,952,533	+		Pf1N1B4_2612	0.34	+0.7
2,952,533	+		Pf1N1B4_2612	0.34	-0.7
2,952,832	+		Pf1N1B4_2612	0.55	-1.5