Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1899

Experiment: 1-ethyl-3-methylimidazolium chloride 80 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 80 mM
2,172,825	+		Pf1N1B4_1898	0.55	-0.6
2,172,825	+				-0.1
2,172,825	+		Pf1N1B4_1898	0.55	-0.0
2,172,826	-		Pf1N1B4_1898	0.55	+0.3
2,172,831	+		Pf1N1B4_1898	0.56	+0.6
2,172,831	+		Pf1N1B4_1898	0.56	+1.5
2,172,831	+		Pf1N1B4_1898	0.56	+1.9
2,172,832	-		Pf1N1B4_1898	0.56	-0.2
2,172,832	-		Pf1N1B4_1898	0.56	-0.1
2,173,023	+		Pf1N1B4_1898	0.70	-0.1
2,173,023	+		Pf1N1B4_1898	0.70	-1.0
2,173,023	+		Pf1N1B4_1898	0.70	-0.5
2,173,024	-		Pf1N1B4_1898	0.71	-0.5
2,173,056	+				+2.2
2,173,056	+		Pf1N1B4_1898	0.73	+1.2
2,173,056	+		Pf1N1B4_1898	0.73	-0.2
2,173,056	+		Pf1N1B4_1898	0.73	-0.1
2,173,056	+		Pf1N1B4_1898	0.73	-0.5
2,173,056	+		Pf1N1B4_1898	0.73	-0.7
2,173,056	+		Pf1N1B4_1898	0.73	+1.9
2,173,056	+		Pf1N1B4_1898	0.73	-0.3
2,173,056	+		Pf1N1B4_1898	0.73	+0.2
2,173,056	+		Pf1N1B4_1898	0.73	+0.2
2,173,056	+		Pf1N1B4_1898	0.73	+1.0
2,173,057	-		Pf1N1B4_1898	0.73	+0.5
2,173,057	-		Pf1N1B4_1898	0.73	+1.5
2,173,057	-		Pf1N1B4_1898	0.73	+0.2
2,173,057	-				-0.1
2,173,057	-		Pf1N1B4_1898	0.73	-1.5
2,173,057	-		Pf1N1B4_1898	0.73	+2.0
2,173,057	-		Pf1N1B4_1898	0.73	-0.3
2,173,101	-		Pf1N1B4_1898	0.76	+1.1
2,173,203	+		Pf1N1B4_1898	0.84	-1.1
2,173,203	+		Pf1N1B4_1898	0.84	-0.1
2,173,204	-		Pf1N1B4_1898	0.84	+0.0
2,173,204	-		Pf1N1B4_1898	0.84	+0.9
2,173,408	+				-1.7
2,173,408	+				+1.5
2,173,408	+				+0.5
2,173,408	+				+0.3
2,173,408	+				-0.1
2,173,408	+				+1.5
2,173,408	+				+0.4
2,173,409	-				+0.8
2,173,414	+				+0.1
2,173,485	+				+0.5
2,173,485	+				+0.5
2,173,486	-				-0.4
2,173,486	-				-0.7
2,173,549	+				+0.5
2,173,550	-				+0.4
2,173,568	+				-0.1
2,173,568	+				+0.0
2,173,569	-				+0.5
2,173,620	-				+1.2
2,173,696	-				+1.2
2,173,696	-				+2.2
2,173,696	-				+0.5
2,173,705	-				-0.8
2,173,881	+		Pf1N1B4_1899	0.38	-0.7
2,173,882	-		Pf1N1B4_1899	0.38	-0.8
2,173,882	-		Pf1N1B4_1899	0.38	+0.3
2,173,914	-		Pf1N1B4_1899	0.46	-0.1
2,173,941	-		Pf1N1B4_1899	0.52	+1.1
2,174,056	+		Pf1N1B4_1899	0.81	-0.5
2,174,056	+		Pf1N1B4_1899	0.81	-0.4
2,174,056	+		Pf1N1B4_1899	0.81	-0.7
2,174,056	+		Pf1N1B4_1899	0.81	-0.8
2,174,057	-		Pf1N1B4_1899	0.81	-0.5
2,174,057	-		Pf1N1B4_1899	0.81	-1.1
2,174,057	-		Pf1N1B4_1899	0.81	-1.5
2,174,057	-		Pf1N1B4_1899	0.81	-1.5
2,174,228	+		Pf1N1B4_1900	0.29	+1.5
2,174,228	+		Pf1N1B4_1900	0.29	-2.5
2,174,228	+		Pf1N1B4_1900	0.29	-0.5
2,174,229	-		Pf1N1B4_1900	0.30	+1.5
2,174,229	-		Pf1N1B4_1900	0.30	-0.8
2,174,267	+		Pf1N1B4_1900	0.41	+1.5
2,174,267	+		Pf1N1B4_1900	0.41	-1.9
2,174,267	+		Pf1N1B4_1900	0.41	-0.9
2,174,268	-		Pf1N1B4_1900	0.42	-1.3
2,174,268	-		Pf1N1B4_1900	0.42	+1.3
2,174,268	-		Pf1N1B4_1900	0.42	-0.5
2,174,280	+		Pf1N1B4_1900	0.45	-0.5
2,174,280	+		Pf1N1B4_1900	0.45	-0.7
2,174,280	+		Pf1N1B4_1900	0.45	+0.5
2,174,280	+		Pf1N1B4_1900	0.45	-0.1
2,174,280	+		Pf1N1B4_1900	0.45	-1.7
2,174,280	+		Pf1N1B4_1900	0.45	+0.4
2,174,280	+		Pf1N1B4_1900	0.45	-1.3
2,174,280	+		Pf1N1B4_1900	0.45	+0.4
2,174,280	+		Pf1N1B4_1900	0.45	+0.1
2,174,280	+		Pf1N1B4_1900	0.45	-0.5
2,174,280	+		Pf1N1B4_1900	0.45	+0.3
2,174,280	+		Pf1N1B4_1900	0.45	+0.0
2,174,280	+		Pf1N1B4_1900	0.45	-0.3
2,174,281	-		Pf1N1B4_1900	0.46	-1.5
2,174,281	-		Pf1N1B4_1900	0.46	+1.2
2,174,281	-		Pf1N1B4_1900	0.46	-0.5
2,174,281	-		Pf1N1B4_1900	0.46	+0.2
2,174,281	-		Pf1N1B4_1900	0.46	-2.2
2,174,281	-		Pf1N1B4_1900	0.46	+0.1
2,174,281	-		Pf1N1B4_1900	0.46	+1.5
2,174,281	-		Pf1N1B4_1900	0.46	+0.0
2,174,281	-		Pf1N1B4_1900	0.46	+0.5
2,174,281	-		Pf1N1B4_1900	0.46	+0.3
2,174,281	-		Pf1N1B4_1900	0.46	-2.8
2,174,281	-		Pf1N1B4_1900	0.46	+1.9
2,174,281	-		Pf1N1B4_1900	0.46	+0.3
2,174,424	+		Pf1N1B4_1900	0.89	-0.8
2,174,424	+		Pf1N1B4_1900	0.89	+0.2
2,174,424	+		Pf1N1B4_1900	0.89	-0.8
2,174,424	+		Pf1N1B4_1900	0.89	-0.5
2,174,425	-		Pf1N1B4_1900	0.90	-0.6
2,174,425	-		Pf1N1B4_1900	0.90	+1.5
2,174,425	-		Pf1N1B4_1900	0.90	-0.2
2,174,439	+				-0.9
2,174,470	+				+0.6
2,174,475	+				-0.3
2,174,475	+				-0.3
2,174,475	+				+1.7
2,174,475	+				-1.3
2,174,475	+				-0.1
2,174,476	-				-0.8
2,174,476	-				-0.8
2,174,476	-				-1.7
2,174,476	-				-0.3
2,174,476	-				+0.8
2,174,476	-				+2.3
2,174,476	-				+1.6
2,174,514	+				-1.7
2,174,514	+				-1.1
2,174,514	+				-1.0
2,174,514	+				+0.8
2,174,514	+				-0.1
2,174,514	+				+1.1
2,174,514	+				+0.6
2,174,514	+				-2.0
2,174,514	+				+0.5
2,174,514	+				-0.0
2,174,515	-				+0.0
2,174,515	-				-0.3
2,174,515	-				+0.4
2,174,515	-				-1.7
2,174,515	-				+0.0
2,174,515	-				+0.2
2,174,515	-				+0.7
2,174,515	-				-2.0
2,174,515	-				-1.3
2,174,515	-				-0.3
2,174,515	-				-0.4
2,174,515	-				+0.3
2,174,515	-				+0.3
2,174,515	-				-0.1
2,174,515	-				-1.3
2,174,515	-				-0.5
2,174,515	-				-0.7
2,174,516	+				+0.9
2,174,516	+				+0.2
2,174,516	+				-0.8
2,174,517	-				-0.2
2,174,517	-				+2.2
2,174,517	-				+1.2
2,174,517	-				-0.1
2,174,517	-				-0.8
2,174,517	-				+1.8
2,174,517	-				-0.3
2,174,517	-				+0.6
2,174,518	+				-0.4
2,174,518	+				+1.5
2,174,518	+				-0.4
2,174,518	+				-0.5
2,174,518	+				+0.2
2,174,518	+				+0.2
2,174,518	+				+0.8
2,174,518	+				+1.5
2,174,519	-				-1.0
2,174,519	-				+0.2
2,174,519	-				+0.5
2,174,519	-				-1.7
2,174,519	-				+1.1
2,174,519	-				-1.3
2,174,529	+				-2.2
2,174,529	+				+0.5
2,174,529	+				+0.1
2,174,582	+				-0.7
2,174,583	-				+0.3
2,174,583	-				+1.0
2,174,597	-				+0.1
2,174,943	+		Pf1N1B4_1901	0.60	-1.3
2,174,943	+		Pf1N1B4_1901	0.60	-0.8
2,174,943	+		Pf1N1B4_1901	0.60	+0.1
2,174,943	+		Pf1N1B4_1901	0.60	-0.8
2,174,943	+		Pf1N1B4_1901	0.60	-1.1
2,174,943	+		Pf1N1B4_1901	0.60	-0.8
2,174,943	+		Pf1N1B4_1901	0.60	-0.7
2,174,943	+		Pf1N1B4_1901	0.60	+0.5
2,174,944	-		Pf1N1B4_1901	0.60	+1.1
2,174,944	-		Pf1N1B4_1901	0.60	+0.5
2,174,944	-		Pf1N1B4_1901	0.60	+1.5
2,175,080	-		Pf1N1B4_1901	0.81	-0.5