Experiment: L-mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01850 and HSERO_RS01855 are separated by 322 nucleotides HSERO_RS01855 and HSERO_RS01860 are separated by 19 nucleotides HSERO_RS01860 and HSERO_RS01865 are separated by 1 nucleotides
HSERO_RS01850: HSERO_RS01850 - signal recognition particle protein, at 406,226 to 407,596
_RS01850
HSERO_RS01855: HSERO_RS01855 - myristoyl transferase, at 407,919 to 408,878
_RS01855
HSERO_RS01860: HSERO_RS01860 - sulfonate ABC transporter permease, at 408,898 to 409,719
_RS01860
HSERO_RS01865: HSERO_RS01865 - sulfonate ABC transporter ATP-binding protein, at 409,721 to 410,530
_RS01865
Position (kb) 407
408
409 Strain fitness (log2 ratio) -1
0
1 at 407.685 kb on + strand at 407.718 kb on - strand at 407.728 kb on - strand at 407.728 kb on - strand at 407.753 kb on - strand at 407.901 kb on + strand at 407.909 kb on - strand at 407.938 kb on + strand at 408.038 kb on + strand at 408.154 kb on - strand, within HSERO_RS01855 at 408.462 kb on + strand, within HSERO_RS01855 at 408.504 kb on + strand, within HSERO_RS01855 at 408.634 kb on + strand, within HSERO_RS01855 at 408.642 kb on - strand, within HSERO_RS01855 at 408.869 kb on - strand at 408.875 kb on - strand at 408.886 kb on + strand at 408.963 kb on + strand at 408.980 kb on - strand at 409.056 kb on + strand, within HSERO_RS01860 at 409.064 kb on - strand, within HSERO_RS01860 at 409.064 kb on - strand, within HSERO_RS01860 at 409.205 kb on + strand, within HSERO_RS01860 at 409.311 kb on - strand at 409.326 kb on + strand, within HSERO_RS01860 at 409.493 kb on - strand, within HSERO_RS01860 at 409.493 kb on - strand, within HSERO_RS01860 at 409.495 kb on - strand, within HSERO_RS01860 at 409.495 kb on - strand, within HSERO_RS01860 at 409.569 kb on - strand, within HSERO_RS01860 at 409.749 kb on + strand at 409.749 kb on + strand at 409.757 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-mannose (C) remove 407,685 + +0.2 407,718 - -0.1 407,728 - +0.4 407,728 - +0.7 407,753 - +0.2 407,901 + -1.5 407,909 - -0.1 407,938 + +0.0 408,038 + +0.7 408,154 - HSERO_RS01855 0.24 -0.0 408,462 + HSERO_RS01855 0.57 +0.6 408,504 + HSERO_RS01855 0.61 +0.7 408,634 + HSERO_RS01855 0.74 -0.2 408,642 - HSERO_RS01855 0.75 +1.0 408,869 - -0.0 408,875 - +0.2 408,886 + -0.9 408,963 + +0.9 408,980 - +1.3 409,056 + HSERO_RS01860 0.19 -0.1 409,064 - HSERO_RS01860 0.20 -0.5 409,064 - HSERO_RS01860 0.20 -0.3 409,205 + HSERO_RS01860 0.37 -0.2 409,311 - +0.5 409,326 + HSERO_RS01860 0.52 -0.1 409,493 - HSERO_RS01860 0.72 +0.5 409,493 - HSERO_RS01860 0.72 -0.2 409,495 - HSERO_RS01860 0.73 -0.3 409,495 - HSERO_RS01860 0.73 -0.4 409,569 - HSERO_RS01860 0.82 -0.3 409,749 + +0.2 409,749 + +0.1 409,757 - -0.0
Or see this region's nucleotide sequence