Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03907

Experiment: PYE with Thallium(I) acetate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Thallium(I) acetate 0.004 mg/ml
3,591,639	+				-1.4
3,591,668	+				-1.0
3,591,668	+				-0.6
3,591,695	-				-0.3
3,591,714	+				-1.2
3,591,727	-				-1.7
3,591,734	+		CCNA_03425	0.14	-1.8
3,591,769	-		CCNA_03425	0.48	-0.2
3,591,769	-		CCNA_03425	0.48	+0.9
3,591,773	+		CCNA_03425	0.52	-0.3
3,591,773	+		CCNA_03425	0.52	+0.3
3,591,773	+		CCNA_03425	0.52	-0.6
3,591,773	+		CCNA_03425	0.52	-1.1
3,591,773	+		CCNA_03425	0.52	+0.9
3,591,773	+		CCNA_03425	0.52	-0.2
3,591,773	+		CCNA_03425	0.52	-0.5
3,591,773	+		CCNA_03425	0.52	+0.4
3,591,773	+		CCNA_03425	0.52	-2.0
3,591,773	+		CCNA_03425	0.52	-1.5
3,591,773	+		CCNA_03425	0.52	-0.2
3,591,773	+		CCNA_03425	0.52	-0.3
3,591,773	+		CCNA_03425	0.52	-1.6
3,591,773	+		CCNA_03425	0.52	-0.7
3,591,779	-		CCNA_03425	0.58	+0.5
3,591,781	-		CCNA_03425	0.60	-0.4
3,591,781	-		CCNA_03425	0.60	-0.8
3,591,781	-		CCNA_03425	0.60	+1.3
3,591,781	-		CCNA_03425	0.60	-1.7
3,591,781	-		CCNA_03425	0.60	+0.2
3,591,781	-		CCNA_03425	0.60	+0.5
3,591,781	-		CCNA_03425	0.60	-2.1
3,591,781	-		CCNA_03425	0.60	-0.4
3,591,781	-		CCNA_03425	0.60	+1.7
3,591,781	-		CCNA_03425	0.60	-0.6
3,591,823	-				-0.3
3,591,856	+				-0.4
3,591,874	+				+1.3
3,591,912	+		CCNA_03426	0.13	+0.1
3,591,912	+		CCNA_03426	0.13	-1.7
3,591,912	+		CCNA_03426	0.13	-0.9
3,591,920	-		CCNA_03426	0.15	-0.1
3,591,920	-		CCNA_03426	0.15	+0.5
3,591,925	-		CCNA_03426	0.16	+0.8
3,591,964	+		CCNA_03426	0.24	+0.7
3,591,964	+		CCNA_03426	0.24	-2.8
3,591,972	-		CCNA_03426	0.26	-0.6
3,591,975	+		CCNA_03426	0.27	-0.1
3,591,975	+		CCNA_03426	0.27	-0.2
3,591,983	-		CCNA_03426	0.28	-1.2
3,591,987	-		CCNA_03426	0.29	-0.7
3,592,050	+		CCNA_03426	0.43	-0.2
3,592,051	-		CCNA_03426	0.43	+0.9
3,592,056	-		CCNA_03426	0.44	-2.8
3,592,068	-		CCNA_03426	0.47	+0.4
3,592,068	-		CCNA_03426	0.47	-0.9
3,592,075	+		CCNA_03426	0.48	+0.9
3,592,083	-		CCNA_03426	0.50	-1.1
3,592,096	-		CCNA_03426	0.53	-1.5
3,592,103	-		CCNA_03426	0.54	+0.9
3,592,129	+		CCNA_03426	0.60	-0.3
3,592,129	+		CCNA_03426	0.60	-0.0
3,592,137	-		CCNA_03426	0.62	-0.4
3,592,137	-		CCNA_03426	0.62	+0.6
3,592,152	+				+2.0
3,592,152	+		CCNA_03426	0.65	+1.0
3,592,155	-		CCNA_03426	0.65	+1.1
3,592,184	-		CCNA_03426	0.72	+0.2
3,592,222	-		CCNA_03426	0.80	+0.9
3,592,239	-		CCNA_03426	0.83	-1.4
3,592,239	-		CCNA_03426	0.83	-0.5
3,592,244	+		CCNA_03426	0.85	-0.3
3,592,306	-				-0.6
3,592,320	-				-1.0
3,592,325	-				+1.0
3,592,378	+				-0.7
3,592,416	-				-0.4
3,592,583	+				-0.4
3,592,586	-				+1.2
3,592,610	+				-0.4
3,592,610	+				-0.0
3,592,618	-				-0.4
3,592,618	-				-0.2
3,592,664	-		CCNA_03907	0.15	-0.2
3,592,665	-		CCNA_03907	0.16	-1.9
3,592,694	+		CCNA_03907	0.24	-1.5
3,592,694	+		CCNA_03907	0.24	+0.4
3,592,702	-		CCNA_03907	0.27	-0.2
3,592,702	-		CCNA_03907	0.27	-3.2
3,592,716	+		CCNA_03907	0.31	-0.1
3,592,716	+		CCNA_03907	0.31	+0.7
3,592,716	+		CCNA_03907	0.31	-0.8
3,592,729	+		CCNA_03907	0.35	-0.3
3,592,754	-		CCNA_03907	0.42	-1.5
3,592,830	+		CCNA_03907	0.65	-0.4
3,593,001	-				-1.0
3,593,369	+				-1.1
3,593,391	+				-1.5
3,593,423	-				-0.1
3,593,435	+		CCNA_03429	0.11	+2.5
3,593,438	+		CCNA_03429	0.12	-0.5
3,593,480	-		CCNA_03429	0.18	+1.5
3,593,491	-		CCNA_03429	0.20	+2.2
3,593,513	+		CCNA_03429	0.24	+0.1
3,593,521	-		CCNA_03429	0.25	-0.9
3,593,570	-		CCNA_03429	0.33	-0.3
3,593,580	-		CCNA_03429	0.35	-0.7
3,593,607	+		CCNA_03429	0.39	-0.5
3,593,607	+		CCNA_03429	0.39	+0.6
3,593,615	-				+2.5
3,593,731	+		CCNA_03429	0.59	+0.4
3,593,751	+		CCNA_03429	0.62	+0.1
3,593,846	-		CCNA_03429	0.78	-0.3