Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03324

Experiment: PYE with Thallium(I) acetate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Thallium(I) acetate 0.004 mg/ml
3,504,694	-		CCNA_03323	0.28	-0.3
3,504,695	-		CCNA_03323	0.28	-0.7
3,504,709	+		CCNA_03323	0.29	-1.2
3,504,709	+		CCNA_03323	0.29	+0.7
3,504,712	+		CCNA_03323	0.29	-1.0
3,504,712	-		CCNA_03323	0.29	-0.1
3,504,717	-		CCNA_03323	0.30	+0.6
3,504,717	-		CCNA_03323	0.30	+0.2
3,504,717	-		CCNA_03323	0.30	-1.0
3,504,743	+		CCNA_03323	0.32	-0.6
3,504,751	-		CCNA_03323	0.33	-1.2
3,504,756	-		CCNA_03323	0.33	-0.0
3,504,768	+		CCNA_03323	0.34	+0.4
3,504,776	-		CCNA_03323	0.35	-1.0
3,504,791	+		CCNA_03323	0.36	-0.7
3,504,799	-		CCNA_03323	0.37	-0.5
3,504,799	-		CCNA_03323	0.37	-2.2
3,504,799	-		CCNA_03323	0.37	-0.7
3,504,808	+		CCNA_03323	0.38	-0.1
3,504,824	-		CCNA_03323	0.39	+1.2
3,504,844	-		CCNA_03323	0.41	-0.9
3,504,878	-		CCNA_03323	0.43	-0.3
3,504,881	+		CCNA_03323	0.44	-0.4
3,504,899	-		CCNA_03323	0.45	-0.6
3,504,899	-		CCNA_03323	0.45	+0.8
3,504,939	-		CCNA_03323	0.49	-1.9
3,504,943	+		CCNA_03323	0.49	+1.8
3,504,971	+		CCNA_03323	0.51	-1.2
3,504,982	+		CCNA_03323	0.52	+0.0
3,504,984	-		CCNA_03323	0.52	-0.0
3,504,984	-		CCNA_03323	0.52	+1.2
3,504,990	-		CCNA_03323	0.53	+0.3
3,505,006	+		CCNA_03323	0.54	+0.8
3,505,014	-		CCNA_03323	0.55	-0.3
3,505,025	-		CCNA_03323	0.56	+0.4
3,505,055	+		CCNA_03323	0.58	+0.2
3,505,075	-		CCNA_03323	0.60	+0.5
3,505,148	+		CCNA_03323	0.66	+0.7
3,505,179	-		CCNA_03323	0.69	+0.7
3,505,191	+		CCNA_03323	0.70	-1.0
3,505,191	-		CCNA_03323	0.70	-1.0
3,505,223	-		CCNA_03323	0.72	+0.1
3,505,232	+		CCNA_03323	0.73	+0.8
3,505,232	+		CCNA_03323	0.73	-1.0
3,505,234	-		CCNA_03323	0.73	+2.0
3,505,240	-		CCNA_03323	0.74	+0.0
3,505,252	+		CCNA_03323	0.75	+0.1
3,505,264	+		CCNA_03323	0.76	+0.8
3,505,304	+		CCNA_03323	0.79	-1.2
3,505,363	+		CCNA_03323	0.84	-1.2
3,505,391	-		CCNA_03323	0.86	-0.0
3,505,406	+		CCNA_03323	0.88	-0.1
3,505,414	-		CCNA_03323	0.88	+1.1
3,505,416	+		CCNA_03323	0.89	+3.1
3,505,416	+		CCNA_03323	0.89	-0.7
3,505,416	+		CCNA_03323	0.89	-0.5
3,505,416	+		CCNA_03323	0.89	+0.5
3,505,416	+		CCNA_03323	0.89	-0.1
3,505,419	-		CCNA_03323	0.89	-0.2
3,505,419	-		CCNA_03323	0.89	+0.2
3,505,424	-		CCNA_03323	0.89	+0.5
3,505,424	-		CCNA_03323	0.89	-0.9
3,505,424	-		CCNA_03323	0.89	-0.5
3,505,424	-		CCNA_03323	0.89	+0.7
3,505,424	-		CCNA_03323	0.89	+0.7
3,505,435	+				+0.4
3,505,443	-				-0.9
3,505,443	-				+1.0
3,505,465	+				+0.5
3,505,471	+				+0.5
3,505,473	-				-0.1
3,505,546	+				+0.4
3,505,572	+				+1.5
3,505,574	+				-1.3
3,505,595	-				+1.3
3,505,741	+		CCNA_03324	0.13	+0.3
3,505,812	+		CCNA_03324	0.29	-0.4
3,505,849	-		CCNA_03324	0.38	-0.2
3,505,897	-		CCNA_03324	0.49	+1.1
3,505,897	-		CCNA_03324	0.49	-1.0
3,505,975	-		CCNA_03324	0.67	-0.1
3,506,002	+		CCNA_03324	0.73	+0.9
3,506,036	+		CCNA_03324	0.81	-1.6
3,506,036	+		CCNA_03324	0.81	-0.3
3,506,036	+		CCNA_03324	0.81	-0.2
3,506,036	+		CCNA_03324	0.81	-0.7
3,506,036	+		CCNA_03324	0.81	-0.3
3,506,042	-		CCNA_03324	0.83	-1.6
3,506,044	-		CCNA_03324	0.83	+0.5
3,506,044	-		CCNA_03324	0.83	-0.7
3,506,044	-		CCNA_03324	0.83	-0.5
3,506,044	-		CCNA_03324	0.83	-0.4
3,506,044	-		CCNA_03324	0.83	-0.3
3,506,044	-		CCNA_03324	0.83	-0.5
3,506,104	-				-1.3
3,506,138	-				+0.0
3,506,138	-				-0.5
3,506,150	-				+0.4
3,506,220	-		CCNA_03325	0.10	+0.2
3,506,251	+		CCNA_03325	0.20	-1.0
3,506,296	-		CCNA_03325	0.34	+0.0
3,506,300	+		CCNA_03325	0.35	-0.6
3,506,323	-		CCNA_03325	0.42	+0.0
3,506,335	-		CCNA_03325	0.46	+0.7
3,506,355	-		CCNA_03325	0.52	-1.0
3,506,391	-		CCNA_03325	0.63	+0.5
3,506,423	-		CCNA_03325	0.72	+0.3
3,506,438	-		CCNA_03325	0.77	+0.3
3,506,448	-		CCNA_03325	0.80	+0.2
3,506,496	+				+0.4
3,506,518	+				+0.4
3,506,650	+				+0.3
3,506,658	-				+0.8
3,506,746	+				-0.6
3,506,746	+				-0.8
3,506,750	+				-1.1
3,506,756	+				+0.9
3,506,756	+				+0.0
3,506,764	-				+0.3
3,506,764	-				+1.8
3,506,764	-				-0.8
3,506,781	+				-0.0
3,506,782	+				+1.2
3,506,802	-		CCNA_03326	0.10	+0.1
3,506,808	+		CCNA_03326	0.11	+1.5
3,506,813	-		CCNA_03326	0.11	-0.1
3,506,843	+		CCNA_03326	0.13	+0.4
3,506,863	-		CCNA_03326	0.14	+0.8
3,506,870	+		CCNA_03326	0.14	+0.2
3,506,923	-		CCNA_03326	0.17	-1.4
3,506,997	+		CCNA_03326	0.20	-0.1
3,507,007	-		CCNA_03326	0.21	+1.5
3,507,015	-		CCNA_03326	0.21	-1.5
3,507,016	-		CCNA_03326	0.21	+2.6
3,507,023	+		CCNA_03326	0.22	-0.3
3,507,023	+		CCNA_03326	0.22	-0.5
3,507,039	-		CCNA_03326	0.22	+0.1
3,507,080	+		CCNA_03326	0.25	+0.4
3,507,089	-		CCNA_03326	0.25	-0.9
3,507,102	-		CCNA_03326	0.26	-1.1