Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06725

Experiment: soil sample 8; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 8; outgrowth in LB
1,428,074	-		ABZR87_RS06710	0.85	-0.8
1,428,074	-		ABZR87_RS06710	0.85	-2.2
1,428,074	-		ABZR87_RS06710	0.85	-0.8
1,428,074	-		ABZR87_RS06710	0.85	-0.8
1,428,074	-		ABZR87_RS06710	0.85	+0.3
1,428,074	-		ABZR87_RS06710	0.85	-2.1
1,428,074	-		ABZR87_RS06710	0.85	+0.1
1,428,074	-		ABZR87_RS06710	0.85	-0.6
1,428,074	-		ABZR87_RS06710	0.85	-0.2
1,428,093	+		ABZR87_RS06710	0.87	-0.3
1,428,093	+		ABZR87_RS06710	0.87	-1.2
1,428,093	+		ABZR87_RS06710	0.87	-2.3
1,428,094	-		ABZR87_RS06710	0.87	+0.4
1,428,094	-		ABZR87_RS06710	0.87	-0.3
1,428,094	-		ABZR87_RS06710	0.87	-3.3
1,428,215	-				-0.2
1,428,302	+				+0.6
1,428,302	+				-0.3
1,428,302	+				-0.2
1,428,302	+				+0.7
1,428,302	+				+0.1
1,428,303	-				+0.3
1,428,303	-				-0.5
1,428,314	+				+0.8
1,428,315	-				-0.1
1,428,406	-		ABZR87_RS06715	0.15	-1.4
1,428,406	-		ABZR87_RS06715	0.15	-1.7
1,428,406	-		ABZR87_RS06715	0.15	-0.9
1,428,643	-		ABZR87_RS06715	0.67	-1.2
1,428,703	+		ABZR87_RS06715	0.80	+1.3
1,428,704	-		ABZR87_RS06715	0.81	-2.1
1,428,704	-		ABZR87_RS06715	0.81	-1.1
1,428,704	-		ABZR87_RS06715	0.81	-1.0
1,428,704	-		ABZR87_RS06715	0.81	+0.6
1,428,759	+				-0.4
1,428,759	+				-0.5
1,428,759	+				-0.1
1,428,759	+				-0.4
1,428,759	+				-1.2
1,428,759	+				-1.6
1,428,759	+				+0.4
1,428,759	+				-0.8
1,428,759	+				-0.0
1,428,760	-				-0.1
1,428,760	-				-2.4
1,428,760	-				+0.3
1,428,760	-				+0.6
1,428,760	-				-0.2
1,428,760	-				+0.6
1,428,760	-				-1.5
1,428,760	-				+0.6
1,428,760	-				-0.8
1,428,760	-				-0.9
1,428,760	-				-0.7
1,428,760	-				+0.3
1,428,760	-				-0.3
1,428,774	+				-0.5
1,428,774	+				-2.6
1,428,775	-				-1.3
1,428,775	-				-3.1
1,428,775	-				-2.8
1,428,789	+				-4.0
1,428,789	+				-1.0
1,428,789	+				-2.6
1,428,789	+				-0.7
1,428,790	-				-4.5
1,428,790	-				-4.7
1,429,028	-				+0.1
1,429,073	+				-1.0
1,429,073	+				-0.8
1,429,073	+				-0.6
1,429,073	+				+0.2
1,429,073	+				-0.7
1,429,074	-				-0.0
1,429,074	-				-0.5
1,429,074	-				+0.3
1,429,074	-				+0.2
1,429,082	+				-0.1
1,429,082	+				+0.2
1,429,082	+				+0.2
1,429,082	+				-1.8
1,429,083	-				-1.4
1,429,083	-				-1.1
1,429,083	-				-0.9
1,429,083	-				-1.0
1,429,083	-				-1.2
1,429,094	+				-1.5
1,429,095	-				-1.6
1,429,095	-				-0.9
1,429,167	+				-0.5
1,429,167	+				-0.7
1,429,167	+				-0.6
1,429,167	+				-0.9
1,429,167	+				-1.1
1,429,167	+				+0.3
1,429,167	+				-1.9
1,429,168	-				-1.4
1,429,374	+		ABZR87_RS06725	0.17	+0.6
1,429,374	+		ABZR87_RS06725	0.17	-0.7
1,429,374	+		ABZR87_RS06725	0.17	-1.8
1,429,375	-		ABZR87_RS06725	0.17	-0.6
1,429,375	-		ABZR87_RS06725	0.17	-0.7
1,429,446	+		ABZR87_RS06725	0.21	-0.8
1,429,446	+		ABZR87_RS06725	0.21	-0.8
1,429,447	-		ABZR87_RS06725	0.21	-0.8
1,429,447	-		ABZR87_RS06725	0.21	-0.9
1,429,447	-		ABZR87_RS06725	0.21	+1.7
1,429,447	-		ABZR87_RS06725	0.21	-0.9
1,429,586	+		ABZR87_RS06725	0.29	-0.5
1,429,587	-		ABZR87_RS06725	0.29	-1.1
1,429,587	-		ABZR87_RS06725	0.29	-1.0
1,429,587	-		ABZR87_RS06725	0.29	-1.8
1,429,658	+		ABZR87_RS06725	0.33	-0.4
1,429,658	+		ABZR87_RS06725	0.33	-0.8
1,429,659	-		ABZR87_RS06725	0.33	-1.2
1,429,659	-		ABZR87_RS06725	0.33	-0.9
1,429,659	-		ABZR87_RS06725	0.33	-1.5
1,429,667	+		ABZR87_RS06725	0.34	-0.3
1,429,667	+		ABZR87_RS06725	0.34	-1.5
1,429,667	+		ABZR87_RS06725	0.34	-1.3
1,429,668	-		ABZR87_RS06725	0.34	-1.7
1,429,668	-		ABZR87_RS06725	0.34	-0.9
1,429,668	-		ABZR87_RS06725	0.34	-0.4
1,429,668	-		ABZR87_RS06725	0.34	-1.7
1,429,668	-		ABZR87_RS06725	0.34	+0.8
1,429,668	-		ABZR87_RS06725	0.34	-0.8
1,429,668	-		ABZR87_RS06725	0.34	-0.6
1,429,714	+		ABZR87_RS06725	0.37	-1.1
1,429,715	-		ABZR87_RS06725	0.37	-0.2
1,429,715	-		ABZR87_RS06725	0.37	+0.3
1,429,715	-		ABZR87_RS06725	0.37	-0.8
1,429,715	-		ABZR87_RS06725	0.37	-1.3
1,429,715	-		ABZR87_RS06725	0.37	-1.2
1,429,815	+		ABZR87_RS06725	0.42	-0.7
1,429,815	+		ABZR87_RS06725	0.42	-1.5
1,429,816	-		ABZR87_RS06725	0.42	-1.1
1,429,816	-		ABZR87_RS06725	0.42	-0.5
1,429,816	-		ABZR87_RS06725	0.42	-0.4
1,429,874	+		ABZR87_RS06725	0.46	-2.2
1,429,874	+		ABZR87_RS06725	0.46	-0.5
1,429,875	-		ABZR87_RS06725	0.46	-0.9
1,429,875	-		ABZR87_RS06725	0.46	-1.1
1,429,898	+		ABZR87_RS06725	0.47	-1.9
1,430,053	-		ABZR87_RS06725	0.56	-2.1
1,430,367	+		ABZR87_RS06725	0.74	-0.1
1,430,367	+		ABZR87_RS06725	0.74	+0.3
1,430,367	+		ABZR87_RS06725	0.74	-3.5
1,430,367	+		ABZR87_RS06725	0.74	-0.8
1,430,368	-		ABZR87_RS06725	0.74	-0.1
1,430,368	-		ABZR87_RS06725	0.74	-1.1
1,430,368	-		ABZR87_RS06725	0.74	-0.6
1,430,368	-		ABZR87_RS06725	0.74	-0.8
1,430,368	-		ABZR87_RS06725	0.74	+0.2
1,430,449	-		ABZR87_RS06725	0.78	-0.5
1,430,484	+		ABZR87_RS06725	0.80	-1.4
1,430,485	-		ABZR87_RS06725	0.81	-0.7
1,430,485	-		ABZR87_RS06725	0.81	-0.8
1,430,529	+		ABZR87_RS06725	0.83	-1.3
1,430,529	+		ABZR87_RS06725	0.83	-1.1
1,430,529	+		ABZR87_RS06725	0.83	-0.6
1,430,529	+		ABZR87_RS06725	0.83	-0.8
1,430,529	+		ABZR87_RS06725	0.83	-1.2
1,430,529	+		ABZR87_RS06725	0.83	-0.4
1,430,529	+		ABZR87_RS06725	0.83	-0.1
1,430,529	+		ABZR87_RS06725	0.83	-1.9
1,430,529	+		ABZR87_RS06725	0.83	-0.7
1,430,530	-		ABZR87_RS06725	0.83	-1.5
1,430,530	-		ABZR87_RS06725	0.83	+0.0
1,430,530	-		ABZR87_RS06725	0.83	-1.6
1,430,530	-		ABZR87_RS06725	0.83	-0.9
1,430,928	+				-0.3
1,430,929	-				-0.0
1,430,930	+				-0.3
1,430,930	+				+0.4
1,430,931	-				+0.1
1,431,011	+				+0.5
1,431,012	-				-0.3
1,431,022	+				+0.8
1,431,058	+				+0.6
1,431,058	+				-0.5
1,431,058	+				+0.9
1,431,058	+				+1.4
1,431,058	+				+0.3
1,431,058	+				+0.0
1,431,058	+				-0.1
1,431,059	-				-0.1
1,431,059	-				-0.8
1,431,059	-				-0.3
1,431,066	+				-0.2
1,431,066	+				-0.2
1,431,067	-				+0.3
1,431,067	-				-1.7
1,431,067	-				+1.4
1,431,067	-				-0.3
1,431,067	-				+0.3
1,431,067	-				-0.3
1,431,490	+				+0.4
1,431,490	+				-1.0
1,431,491	-				+0.1
1,431,491	-				+0.3
1,431,507	-				-0.3
1,431,551	+		ABZR87_RS06735	0.15	+0.2
1,431,551	+		ABZR87_RS06735	0.15	-2.9
1,431,551	+		ABZR87_RS06735	0.15	-3.1
1,431,552	-		ABZR87_RS06735	0.15	+0.3
1,431,552	-		ABZR87_RS06735	0.15	+0.9
1,431,552	-		ABZR87_RS06735	0.15	+2.3
1,431,572	+		ABZR87_RS06735	0.19	+0.9
1,431,572	+		ABZR87_RS06735	0.19	-2.6
1,431,572	+		ABZR87_RS06735	0.19	+0.6
1,431,572	+		ABZR87_RS06735	0.19	-0.3
1,431,573	-		ABZR87_RS06735	0.20	+0.8
1,431,573	-		ABZR87_RS06735	0.20	+0.5
1,431,573	-		ABZR87_RS06735	0.20	+0.4
1,431,573	-		ABZR87_RS06735	0.20	+0.0
1,431,611	+		ABZR87_RS06735	0.28	+0.4
1,431,611	+		ABZR87_RS06735	0.28	-0.7
1,431,611	+		ABZR87_RS06735	0.28	-0.3
1,431,611	+		ABZR87_RS06735	0.28	+0.1
1,431,611	+		ABZR87_RS06735	0.28	+0.3
1,431,611	+		ABZR87_RS06735	0.28	+1.1
1,431,612	-		ABZR87_RS06735	0.28	-0.1
1,431,612	-		ABZR87_RS06735	0.28	+0.8
1,431,612	-		ABZR87_RS06735	0.28	-0.1
1,431,612	-		ABZR87_RS06735	0.28	-0.4
1,431,612	-		ABZR87_RS06735	0.28	+1.0
1,431,797	+		ABZR87_RS06735	0.66	+0.6
1,431,797	+		ABZR87_RS06735	0.66	-0.1
1,431,818	+		ABZR87_RS06735	0.71	+0.2
1,431,818	+		ABZR87_RS06735	0.71	-1.0
1,431,818	+		ABZR87_RS06735	0.71	+0.2
1,431,818	+		ABZR87_RS06735	0.71	-2.2
1,431,819	-		ABZR87_RS06735	0.71	+0.9
1,431,819	-		ABZR87_RS06735	0.71	+0.7
1,431,819	-		ABZR87_RS06735	0.71	-0.3