Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS06700

Experiment: soil sample 8; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	soil sample 8; outgrowth in LB
1,423,030	+		ABZR87_RS06690	0.32	-1.0
1,423,030	+		ABZR87_RS06690	0.32	-0.0
1,423,030	+		ABZR87_RS06690	0.32	+0.0
1,423,030	+		ABZR87_RS06690	0.32	+1.1
1,423,031	-		ABZR87_RS06690	0.32	-0.9
1,423,031	-		ABZR87_RS06690	0.32	-0.8
1,423,031	-		ABZR87_RS06690	0.32	+0.5
1,423,031	-		ABZR87_RS06690	0.32	+0.1
1,423,031	-		ABZR87_RS06690	0.32	-0.7
1,423,038	+		ABZR87_RS06690	0.33	-1.9
1,423,038	+		ABZR87_RS06690	0.33	-0.2
1,423,111	+		ABZR87_RS06690	0.42	+0.5
1,423,111	+		ABZR87_RS06690	0.42	+0.3
1,423,111	+		ABZR87_RS06690	0.42	-0.4
1,423,112	-		ABZR87_RS06690	0.42	-0.9
1,423,112	-		ABZR87_RS06690	0.42	-0.1
1,423,112	-		ABZR87_RS06690	0.42	-1.5
1,423,112	-		ABZR87_RS06690	0.42	+0.4
1,423,112	-		ABZR87_RS06690	0.42	+0.1
1,423,120	+		ABZR87_RS06690	0.43	-0.4
1,423,121	-		ABZR87_RS06690	0.43	+0.1
1,423,121	-		ABZR87_RS06690	0.43	+0.6
1,423,126	+		ABZR87_RS06690	0.44	-1.7
1,423,171	+		ABZR87_RS06690	0.49	+0.5
1,423,171	+		ABZR87_RS06690	0.49	-0.8
1,423,171	+		ABZR87_RS06690	0.49	-0.0
1,423,171	+		ABZR87_RS06690	0.49	-0.1
1,423,171	+		ABZR87_RS06690	0.49	-0.6
1,423,172	-		ABZR87_RS06690	0.49	-0.8
1,423,174	+		ABZR87_RS06690	0.50	-1.2
1,423,174	+		ABZR87_RS06690	0.50	-0.1
1,423,174	+		ABZR87_RS06690	0.50	-0.8
1,423,174	+		ABZR87_RS06690	0.50	+0.2
1,423,174	+		ABZR87_RS06690	0.50	-1.3
1,423,174	+		ABZR87_RS06690	0.50	-0.3
1,423,174	+		ABZR87_RS06690	0.50	-0.3
1,423,174	+		ABZR87_RS06690	0.50	-1.9
1,423,175	-		ABZR87_RS06690	0.50	-0.2
1,423,175	-		ABZR87_RS06690	0.50	+0.6
1,423,175	-		ABZR87_RS06690	0.50	+0.4
1,423,175	-		ABZR87_RS06690	0.50	+0.3
1,423,175	-		ABZR87_RS06690	0.50	+0.3
1,423,175	-		ABZR87_RS06690	0.50	+0.7
1,423,177	+		ABZR87_RS06690	0.50	-0.2
1,423,178	-		ABZR87_RS06690	0.50	-0.5
1,423,178	-		ABZR87_RS06690	0.50	-0.4
1,423,189	+		ABZR87_RS06690	0.51	-0.9
1,423,189	+		ABZR87_RS06690	0.51	+0.3
1,423,190	-		ABZR87_RS06690	0.52	-0.7
1,423,228	+		ABZR87_RS06690	0.56	+0.5
1,423,229	-		ABZR87_RS06690	0.56	-0.6
1,423,229	-		ABZR87_RS06690	0.56	-1.1
1,423,244	-		ABZR87_RS06690	0.58	+0.3
1,423,264	+		ABZR87_RS06690	0.61	-0.6
1,423,264	+		ABZR87_RS06690	0.61	-0.1
1,423,264	+		ABZR87_RS06690	0.61	-1.1
1,423,265	-		ABZR87_RS06690	0.61	-1.6
1,423,265	-		ABZR87_RS06690	0.61	+0.7
1,423,265	-		ABZR87_RS06690	0.61	-1.2
1,423,318	+		ABZR87_RS06690	0.67	+0.5
1,423,318	+		ABZR87_RS06690	0.67	-0.9
1,423,318	+		ABZR87_RS06690	0.67	-0.2
1,423,319	-		ABZR87_RS06690	0.67	+0.3
1,423,319	-		ABZR87_RS06690	0.67	+0.6
1,423,319	-		ABZR87_RS06690	0.67	+0.4
1,423,319	-		ABZR87_RS06690	0.67	+0.0
1,423,319	-		ABZR87_RS06690	0.67	+0.5
1,423,319	-		ABZR87_RS06690	0.67	-1.4
1,423,385	-		ABZR87_RS06690	0.75	-0.0
1,423,420	+		ABZR87_RS06690	0.80	-0.5
1,423,420	+		ABZR87_RS06690	0.80	-1.1
1,423,421	-		ABZR87_RS06690	0.80	+0.4
1,423,421	-		ABZR87_RS06690	0.80	-0.3
1,423,421	-		ABZR87_RS06690	0.80	-1.6
1,423,421	-		ABZR87_RS06690	0.80	-0.1
1,423,421	-		ABZR87_RS06690	0.80	-0.3
1,423,421	-		ABZR87_RS06690	0.80	+1.3
1,423,421	-		ABZR87_RS06690	0.80	+0.4
1,423,483	+		ABZR87_RS06690	0.88	-0.2
1,423,484	-		ABZR87_RS06690	0.88	+0.6
1,423,484	-		ABZR87_RS06690	0.88	+0.5
1,423,484	-		ABZR87_RS06690	0.88	-1.5
1,423,491	+		ABZR87_RS06690	0.88	+0.5
1,423,492	-		ABZR87_RS06690	0.89	+0.2
1,423,492	-		ABZR87_RS06690	0.89	-1.5
1,423,492	-		ABZR87_RS06690	0.89	-0.3
1,423,513	+				-0.0
1,423,514	-				+0.0
1,423,514	-				-0.3
1,423,514	-				+0.1
1,423,514	-				-0.2
1,423,534	+				-0.2
1,423,534	+				-0.9
1,423,534	+				-0.5
1,423,534	+				-0.9
1,423,534	+				-0.4
1,423,534	+				-1.1
1,423,534	+				+0.3
1,423,534	+				-0.1
1,423,534	+				-0.5
1,423,534	+				-0.0
1,423,534	+				+0.1
1,423,534	+				-0.8
1,423,535	-				+0.9
1,423,535	-				+0.4
1,423,535	-				+0.3
1,423,535	-				+0.8
1,423,535	-				-0.6
1,423,535	-				-1.3
1,423,535	-				+1.0
1,423,535	-				-0.8
1,423,535	-				+0.1
1,423,535	-				-1.3
1,423,535	-				+0.4
1,423,535	-				+0.2
1,423,535	-				+0.2
1,423,535	-				-0.9
1,423,535	-				-0.2
1,423,535	-				-1.0
1,423,582	+				+0.2
1,423,583	-				-0.1
1,423,714	+		ABZR87_RS06695	0.24	-2.4
1,423,714	+		ABZR87_RS06695	0.24	-0.3
1,423,715	-		ABZR87_RS06695	0.25	-0.0
1,423,715	-		ABZR87_RS06695	0.25	-0.4
1,423,715	-		ABZR87_RS06695	0.25	-0.1
1,423,715	-		ABZR87_RS06695	0.25	+1.0
1,423,756	+		ABZR87_RS06695	0.37	-0.9
1,423,756	+		ABZR87_RS06695	0.37	-4.3
1,423,756	+		ABZR87_RS06695	0.37	-2.1
1,423,766	+		ABZR87_RS06695	0.40	-3.6
1,423,781	+		ABZR87_RS06695	0.44	-3.1
1,423,781	+		ABZR87_RS06695	0.44	-4.2
1,423,782	-		ABZR87_RS06695	0.45	+0.9
1,423,782	-		ABZR87_RS06695	0.45	-0.4
1,423,801	+		ABZR87_RS06695	0.50	-4.7
1,423,801	+		ABZR87_RS06695	0.50	-4.7
1,423,802	-		ABZR87_RS06695	0.50	-0.5
1,423,802	-		ABZR87_RS06695	0.50	-0.0
1,423,806	+		ABZR87_RS06695	0.52	-3.7
1,423,806	+		ABZR87_RS06695	0.52	-2.0
1,423,806	+		ABZR87_RS06695	0.52	-3.9
1,423,807	-		ABZR87_RS06695	0.52	-0.1
1,423,807	-		ABZR87_RS06695	0.52	+0.7
1,423,965	+				-0.6
1,423,965	+				+0.2
1,423,965	+				-0.4
1,423,965	+				-0.6
1,423,966	+				-0.6
1,423,966	-				+0.6
1,423,966	-				+0.2
1,423,967	+				+1.3
1,423,967	+				+1.2
1,423,967	+				+0.1
1,423,967	+				-0.2
1,423,967	+				+1.0
1,423,967	+				+0.2
1,423,967	+				+1.2
1,423,968	-				-0.2
1,423,968	-				-0.5
1,423,968	-				+0.9
1,423,968	-				-0.7
1,423,968	-				+0.1
1,423,968	-				+0.6
1,423,968	-				+0.3
1,423,968	-				-0.3
1,424,002	+				+0.7
1,424,324	+		ABZR87_RS06700	0.21	-0.4
1,424,324	+		ABZR87_RS06700	0.21	-0.1
1,424,324	+		ABZR87_RS06700	0.21	+0.8
1,424,324	+		ABZR87_RS06700	0.21	+0.0
1,424,325	-		ABZR87_RS06700	0.21	+0.3
1,424,325	-		ABZR87_RS06700	0.21	+0.3
1,424,374	+		ABZR87_RS06700	0.24	-0.0
1,424,374	+		ABZR87_RS06700	0.24	-0.4
1,424,374	+		ABZR87_RS06700	0.24	-0.7
1,424,375	-		ABZR87_RS06700	0.24	-0.5
1,424,414	+		ABZR87_RS06700	0.27	+0.2
1,424,414	+		ABZR87_RS06700	0.27	+0.7
1,424,414	+		ABZR87_RS06700	0.27	+0.4
1,424,414	+		ABZR87_RS06700	0.27	+0.5
1,424,414	+		ABZR87_RS06700	0.27	-0.3
1,424,414	+		ABZR87_RS06700	0.27	+0.2
1,424,414	+		ABZR87_RS06700	0.27	+0.8
1,424,414	+		ABZR87_RS06700	0.27	+0.1
1,424,415	-		ABZR87_RS06700	0.27	-0.7
1,424,415	-		ABZR87_RS06700	0.27	-0.1
1,424,415	-		ABZR87_RS06700	0.27	+0.7
1,424,415	-		ABZR87_RS06700	0.27	+0.4
1,424,415	-		ABZR87_RS06700	0.27	-0.1
1,424,420	+		ABZR87_RS06700	0.27	-0.8
1,424,420	+		ABZR87_RS06700	0.27	+0.4
1,424,540	+		ABZR87_RS06700	0.35	+0.0
1,424,540	+		ABZR87_RS06700	0.35	+0.5
1,424,540	+		ABZR87_RS06700	0.35	+0.1
1,424,540	+		ABZR87_RS06700	0.35	+0.3
1,424,540	+		ABZR87_RS06700	0.35	-0.4
1,424,540	+		ABZR87_RS06700	0.35	-0.6
1,424,541	-		ABZR87_RS06700	0.35	-0.1
1,424,541	-		ABZR87_RS06700	0.35	+0.3
1,424,541	-		ABZR87_RS06700	0.35	+0.0
1,424,541	-		ABZR87_RS06700	0.35	-0.5
1,424,541	-		ABZR87_RS06700	0.35	-0.4
1,424,546	+		ABZR87_RS06700	0.35	+0.5
1,424,546	+		ABZR87_RS06700	0.35	+1.1
1,424,546	+		ABZR87_RS06700	0.35	+0.7
1,424,546	+		ABZR87_RS06700	0.35	+0.7
1,424,546	+		ABZR87_RS06700	0.35	-0.1
1,424,546	+		ABZR87_RS06700	0.35	-0.2
1,424,546	+		ABZR87_RS06700	0.35	-1.3
1,424,546	+		ABZR87_RS06700	0.35	-0.6
1,424,546	+		ABZR87_RS06700	0.35	+0.4
1,424,546	+		ABZR87_RS06700	0.35	+0.7
1,424,547	-		ABZR87_RS06700	0.35	-0.1
1,424,547	-		ABZR87_RS06700	0.35	-1.9
1,424,547	-		ABZR87_RS06700	0.35	+0.2
1,424,547	-		ABZR87_RS06700	0.35	+0.7
1,424,547	-		ABZR87_RS06700	0.35	+0.3
1,424,547	-		ABZR87_RS06700	0.35	+0.8
1,424,547	-		ABZR87_RS06700	0.35	+0.6
1,424,547	-		ABZR87_RS06700	0.35	-0.4
1,424,547	-		ABZR87_RS06700	0.35	-0.0
1,424,547	-		ABZR87_RS06700	0.35	-1.0
1,424,547	-		ABZR87_RS06700	0.35	-0.1
1,424,547	-		ABZR87_RS06700	0.35	+0.3
1,424,547	-		ABZR87_RS06700	0.35	+0.1
1,424,547	-		ABZR87_RS06700	0.35	-0.4
1,424,547	-		ABZR87_RS06700	0.35	-0.1
1,424,547	-		ABZR87_RS06700	0.35	+0.0
1,424,578	+		ABZR87_RS06700	0.37	+0.4
1,424,578	+		ABZR87_RS06700	0.37	-0.9
1,424,578	+		ABZR87_RS06700	0.37	+0.2
1,424,666	+		ABZR87_RS06700	0.43	-0.1
1,424,666	+		ABZR87_RS06700	0.43	+0.8
1,424,666	+		ABZR87_RS06700	0.43	+0.1
1,424,666	+		ABZR87_RS06700	0.43	+1.0
1,424,666	+		ABZR87_RS06700	0.43	-0.3
1,424,667	-		ABZR87_RS06700	0.43	-0.5
1,424,667	-		ABZR87_RS06700	0.43	+0.9
1,424,667	-		ABZR87_RS06700	0.43	+1.7
1,424,667	-		ABZR87_RS06700	0.43	+0.9
1,425,328	+		ABZR87_RS06700	0.86	-0.5
1,425,332	+		ABZR87_RS06700	0.86	-0.8
1,425,332	+		ABZR87_RS06700	0.86	-0.8
1,425,332	+		ABZR87_RS06700	0.86	-1.2
1,425,332	+		ABZR87_RS06700	0.86	+0.6
1,425,332	+		ABZR87_RS06700	0.86	-0.2
1,425,332	+		ABZR87_RS06700	0.86	+0.2
1,425,332	+		ABZR87_RS06700	0.86	+0.4
1,425,332	+		ABZR87_RS06700	0.86	-0.5
1,425,332	+		ABZR87_RS06700	0.86	+0.8
1,425,332	+		ABZR87_RS06700	0.86	+0.6
1,425,332	+		ABZR87_RS06700	0.86	+0.7
1,425,332	+		ABZR87_RS06700	0.86	+1.7
1,425,332	+		ABZR87_RS06700	0.86	-0.4
1,425,332	+		ABZR87_RS06700	0.86	-0.2
1,425,332	+		ABZR87_RS06700	0.86	+0.7
1,425,332	+		ABZR87_RS06700	0.86	+1.4
1,425,332	+		ABZR87_RS06700	0.86	-1.2
1,425,332	+		ABZR87_RS06700	0.86	-0.7
1,425,332	+		ABZR87_RS06700	0.86	+1.1
1,425,332	+		ABZR87_RS06700	0.86	-0.1
1,425,332	+		ABZR87_RS06700	0.86	+1.0
1,425,332	+		ABZR87_RS06700	0.86	+0.3
1,425,332	+		ABZR87_RS06700	0.86	+0.1
1,425,332	+		ABZR87_RS06700	0.86	-0.1
1,425,332	+		ABZR87_RS06700	0.86	-0.9
1,425,332	+		ABZR87_RS06700	0.86	-1.1
1,425,333	-		ABZR87_RS06700	0.86	+0.3
1,425,333	-		ABZR87_RS06700	0.86	-0.9
1,425,333	-		ABZR87_RS06700	0.86	-0.1
1,425,333	-		ABZR87_RS06700	0.86	+0.1
1,425,333	-		ABZR87_RS06700	0.86	+0.5
1,425,333	-		ABZR87_RS06700	0.86	-0.4
1,425,333	-		ABZR87_RS06700	0.86	-0.3
1,425,333	-		ABZR87_RS06700	0.86	+1.0
1,425,333	-		ABZR87_RS06700	0.86	+0.1
1,425,333	-		ABZR87_RS06700	0.86	+0.3
1,425,333	-		ABZR87_RS06700	0.86	+0.1
1,425,333	-		ABZR87_RS06700	0.86	+0.1
1,425,333	-		ABZR87_RS06700	0.86	+0.9
1,425,333	-		ABZR87_RS06700	0.86	-0.3
1,425,333	-		ABZR87_RS06700	0.86	+0.7
1,425,333	-		ABZR87_RS06700	0.86	+0.8
1,425,338	+		ABZR87_RS06700	0.86	+0.5
1,425,338	+		ABZR87_RS06700	0.86	+0.4
1,425,338	+		ABZR87_RS06700	0.86	-0.8
1,425,339	-		ABZR87_RS06700	0.86	+0.8
1,425,339	-		ABZR87_RS06700	0.86	+0.3
1,425,339	-		ABZR87_RS06700	0.86	+0.5
1,425,339	-		ABZR87_RS06700	0.86	+0.4
1,425,339	-		ABZR87_RS06700	0.86	-1.0
1,425,339	-		ABZR87_RS06700	0.86	+1.3
1,425,339	-		ABZR87_RS06700	0.86	-0.4
1,425,339	-		ABZR87_RS06700	0.86	-0.4
1,425,365	+		ABZR87_RS06700	0.88	+0.8
1,425,365	+		ABZR87_RS06700	0.88	+0.2
1,425,365	+		ABZR87_RS06700	0.88	+0.0
1,425,366	-		ABZR87_RS06700	0.88	+0.2
1,425,366	-		ABZR87_RS06700	0.88	+0.1
1,425,366	-		ABZR87_RS06700	0.88	+0.5
1,425,366	-		ABZR87_RS06700	0.88	-0.1
1,425,366	-		ABZR87_RS06700	0.88	-0.1
1,425,366	-		ABZR87_RS06700	0.88	+0.6
1,425,366	-		ABZR87_RS06700	0.88	+0.7
1,425,449	+				-0.7
1,425,450	-				+0.1
1,425,450	-				+0.1
1,425,450	-				+0.5
1,425,450	-				+0.9
1,425,539	+				-0.5
1,425,539	+				+0.2
1,425,539	+				-2.7
1,425,540	-				+2.0
1,425,601	-				-0.3
1,425,626	+				-0.1
1,425,639	-				+5.4
1,425,662	+				+4.7
1,425,674	+				+3.2
1,425,674	+				+3.7
1,425,674	+				+3.6
1,425,674	+				+3.2
1,425,675	-				+5.1
1,425,675	-				+5.0
1,425,675	-				+5.2
1,425,675	-				+5.2
1,425,675	-				+6.2
1,425,675	-				+5.2
1,425,675	-				+5.3
1,425,717	+				+4.9
1,425,717	+				+4.7
1,425,718	-				+5.1
1,425,718	-				+5.0
1,425,729	+				+4.1
1,425,730	-				+4.3
1,425,730	-				+4.0
1,425,826	+				+1.0
1,425,834	+				+0.7
1,425,835	-				-0.1
1,425,840	+				+0.2
1,425,840	+				-0.4
1,425,840	+				+0.1
1,425,841	-				-0.3
1,425,841	-				-0.1
1,425,841	-				-0.6
1,425,841	-				+1.1
1,425,841	-				+0.0
1,425,849	-				-0.3
1,425,862	+				-0.1
1,425,862	+				+0.8
1,425,863	-				-0.7
1,425,877	+				+0.0
1,425,877	+				-0.6
1,425,878	-				-0.2
1,425,899	+				+0.6
1,425,899	+				+0.8
1,425,899	+				+0.8
1,425,900	-				+0.8
1,425,900	-				-1.3
1,425,909	-				-0.1
1,425,909	-				-1.1
1,425,918	-				-1.3
1,426,044	+				-0.6
1,426,044	+				-1.1
1,426,044	+				-3.4
1,426,044	+				-1.4
1,426,045	-				-0.8
1,426,045	-				-3.9
1,426,045	-				-1.0
1,426,242	+		ABZR87_RS06705	0.25	-2.3
1,426,242	+		ABZR87_RS06705	0.25	-1.5
1,426,242	+		ABZR87_RS06705	0.25	-0.6
1,426,242	+		ABZR87_RS06705	0.25	+0.3
1,426,243	-		ABZR87_RS06705	0.25	-2.2
1,426,243	-		ABZR87_RS06705	0.25	-1.9
1,426,243	-		ABZR87_RS06705	0.25	-0.7
1,426,243	-		ABZR87_RS06705	0.25	-1.9
1,426,503	+		ABZR87_RS06705	0.45	-2.4
1,426,503	+		ABZR87_RS06705	0.45	+0.0
1,426,503	+		ABZR87_RS06705	0.45	-3.1
1,426,503	+		ABZR87_RS06705	0.45	-2.3
1,426,503	+		ABZR87_RS06705	0.45	-3.3
1,426,503	+		ABZR87_RS06705	0.45	-2.6
1,426,503	+		ABZR87_RS06705	0.45	-3.1
1,426,503	+		ABZR87_RS06705	0.45	-3.2
1,426,504	-		ABZR87_RS06705	0.45	-1.7
1,426,504	-		ABZR87_RS06705	0.45	-0.7
1,426,504	-		ABZR87_RS06705	0.45	-1.9
1,426,504	-		ABZR87_RS06705	0.45	-1.6
1,426,504	-		ABZR87_RS06705	0.45	+0.6
1,426,504	-		ABZR87_RS06705	0.45	-0.3
1,426,504	-		ABZR87_RS06705	0.45	-1.9
1,426,504	-		ABZR87_RS06705	0.45	+1.1