Experiment: D-Glucosamine Hydrochloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21221 and SM_b21222 are separated by 224 nucleotides SM_b21222 and SM_b21223 are separated by 207 nucleotides
SM_b21221: SM_b21221 - ABC transporter for D-Glucosamine, periplasmic substrate-binding protein <small>(from data)</small>, at 783,737 to 784,975
_b21221
SM_b21222: SM_b21222 - transcriptional regulator, at 785,200 to 786,429
_b21222
SM_b21223: SM_b21223 - sulfate adenylyltransferase subunit 2, at 786,637 to 787,536
_b21223
Position (kb) 785
786
787 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 784.229 kb on + strand, within SM_b21221 at 784.229 kb on + strand, within SM_b21221 at 784.229 kb on + strand, within SM_b21221 at 784.230 kb on - strand, within SM_b21221 at 784.268 kb on - strand, within SM_b21221 at 784.281 kb on + strand, within SM_b21221 at 784.282 kb on - strand, within SM_b21221 at 784.282 kb on - strand, within SM_b21221 at 784.296 kb on + strand, within SM_b21221 at 784.296 kb on + strand, within SM_b21221 at 784.297 kb on - strand, within SM_b21221 at 784.297 kb on - strand, within SM_b21221 at 784.297 kb on - strand, within SM_b21221 at 784.297 kb on - strand, within SM_b21221 at 784.297 kb on - strand, within SM_b21221 at 784.297 kb on - strand, within SM_b21221 at 784.548 kb on + strand, within SM_b21221 at 784.593 kb on + strand, within SM_b21221 at 784.686 kb on + strand, within SM_b21221 at 784.725 kb on + strand, within SM_b21221 at 784.777 kb on - strand, within SM_b21221 at 784.859 kb on - strand at 784.860 kb on + strand at 784.989 kb on - strand at 784.989 kb on - strand at 785.172 kb on - strand at 785.594 kb on + strand, within SM_b21222 at 785.594 kb on + strand, within SM_b21222 at 785.594 kb on + strand at 785.594 kb on + strand, within SM_b21222 at 785.875 kb on + strand, within SM_b21222 at 785.875 kb on + strand, within SM_b21222 at 785.884 kb on + strand, within SM_b21222 at 786.119 kb on + strand, within SM_b21222 at 786.120 kb on - strand, within SM_b21222 at 786.120 kb on - strand, within SM_b21222 at 786.120 kb on - strand, within SM_b21222 at 786.206 kb on + strand, within SM_b21222 at 786.472 kb on + strand at 786.473 kb on - strand at 786.506 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (N) remove 784,229 + SM_b21221 0.40 +1.2 784,229 + SM_b21221 0.40 -1.1 784,229 + SM_b21221 0.40 -1.9 784,230 - SM_b21221 0.40 +0.5 784,268 - SM_b21221 0.43 -3.3 784,281 + SM_b21221 0.44 -3.2 784,282 - SM_b21221 0.44 -4.0 784,282 - SM_b21221 0.44 -2.5 784,296 + SM_b21221 0.45 -2.7 784,296 + SM_b21221 0.45 -3.1 784,297 - SM_b21221 0.45 -2.0 784,297 - SM_b21221 0.45 -4.5 784,297 - SM_b21221 0.45 -1.2 784,297 - SM_b21221 0.45 -2.2 784,297 - SM_b21221 0.45 -3.6 784,297 - SM_b21221 0.45 -5.1 784,548 + SM_b21221 0.65 -4.2 784,593 + SM_b21221 0.69 -5.1 784,686 + SM_b21221 0.77 -2.7 784,725 + SM_b21221 0.80 -3.6 784,777 - SM_b21221 0.84 -2.4 784,859 - -5.3 784,860 + -5.3 784,989 - -3.6 784,989 - +1.2 785,172 - -2.3 785,594 + SM_b21222 0.32 +1.9 785,594 + SM_b21222 0.32 +2.7 785,594 + +3.5 785,594 + SM_b21222 0.32 +2.8 785,875 + SM_b21222 0.55 +2.6 785,875 + SM_b21222 0.55 +2.8 785,884 + SM_b21222 0.56 +2.0 786,119 + SM_b21222 0.75 +2.6 786,120 - SM_b21222 0.75 +3.0 786,120 - SM_b21222 0.75 +2.7 786,120 - SM_b21222 0.75 +3.0 786,206 + SM_b21222 0.82 +3.1 786,472 + +1.5 786,473 - +0.0 786,506 - +1.5
Or see this region's nucleotide sequence