Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_950 and Pf1N1B4_951 are separated by 41 nucleotides Pf1N1B4_951 and Pf1N1B4_952 overlap by 4 nucleotides Pf1N1B4_952 and Pf1N1B4_953 are separated by 913 nucleotides
Pf1N1B4_950 - Cell division protein FtsL, at 1,081,907 to 1,082,155
_950
Pf1N1B4_951 - rRNA small subunit methyltransferase H, at 1,082,197 to 1,083,144
_951
Pf1N1B4_952 - Cell division protein MraZ, at 1,083,141 to 1,083,464
_952
Pf1N1B4_953 - rRNA small subunit methyltransferase I, at 1,084,378 to 1,085,232
_953
Position (kb)
1083
1084 Strain fitness (log2 ratio)
-2
-1
0
1 at 1083.192 kb on - strand, within Pf1N1B4_952 at 1083.296 kb on - strand, within Pf1N1B4_952 at 1083.360 kb on - strand, within Pf1N1B4_952 at 1083.370 kb on - strand, within Pf1N1B4_952 at 1083.370 kb on - strand, within Pf1N1B4_952 at 1083.455 kb on - strand at 1083.496 kb on - strand at 1083.615 kb on - strand at 1083.626 kb on - strand at 1083.626 kb on - strand at 1083.674 kb on - strand at 1083.674 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.676 kb on - strand at 1083.711 kb on - strand at 1083.740 kb on - strand at 1083.748 kb on - strand at 1083.748 kb on - strand at 1083.748 kb on - strand at 1083.748 kb on - strand at 1083.748 kb on - strand at 1083.748 kb on - strand at 1083.748 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,083,192 - Pf1N1B4_952 0.16 -0.1 1,083,296 - Pf1N1B4_952 0.48 -0.3 1,083,360 - Pf1N1B4_952 0.68 -1.4 1,083,370 - Pf1N1B4_952 0.71 -1.3 1,083,370 - Pf1N1B4_952 0.71 -1.3 1,083,455 - +0.7 1,083,496 - -1.3 1,083,615 - -1.6 1,083,626 - +1.0 1,083,626 - +1.2 1,083,674 - +0.2 1,083,674 - -0.4 1,083,676 - +0.6 1,083,676 - +0.3 1,083,676 - +0.7 1,083,676 - -0.2 1,083,676 - +0.7 1,083,676 - +0.2 1,083,676 - +0.2 1,083,676 - -0.3 1,083,676 - -2.1 1,083,711 - +0.4 1,083,740 - -2.5 1,083,748 - -0.1 1,083,748 - -0.4 1,083,748 - +0.5 1,083,748 - -0.3 1,083,748 - -0.2 1,083,748 - -0.7 1,083,748 - +1.3
Or see this region's nucleotide sequence