Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2993

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,359,868	-				+1.1
3,359,894	+				+0.2
3,359,894	+				+2.3
3,359,894	+				-0.9
3,359,895	-				-0.5
3,359,895	-				+0.1
3,359,895	-				+0.1
3,360,068	+		Pf1N1B4_2991	0.49	+0.1
3,360,145	+		Pf1N1B4_2991	0.77	-0.5
3,360,145	+		Pf1N1B4_2991	0.77	+0.4
3,360,146	-		Pf1N1B4_2991	0.77	-1.1
3,360,146	-		Pf1N1B4_2991	0.77	-0.9
3,360,146	-		Pf1N1B4_2991	0.77	-1.3
3,360,146	-		Pf1N1B4_2991	0.77	+1.5
3,360,146	-		Pf1N1B4_2991	0.77	-0.9
3,360,151	+		Pf1N1B4_2991	0.79	+1.2
3,360,151	+		Pf1N1B4_2991	0.79	-1.3
3,360,151	+		Pf1N1B4_2991	0.79	+1.0
3,360,151	+		Pf1N1B4_2991	0.79	-0.2
3,360,152	-		Pf1N1B4_2991	0.80	+0.0
3,360,186	+				-0.6
3,360,186	+				-1.2
3,360,186	+				+0.7
3,360,186	+				+0.7
3,360,197	+				-0.9
3,360,198	-				-0.1
3,360,252	-				+1.3
3,360,287	-				+0.3
3,360,346	+		Pf1N1B4_2992	0.11	-0.7
3,360,347	-		Pf1N1B4_2992	0.12	-2.7
3,360,347	-		Pf1N1B4_2992	0.12	-0.8
3,360,347	-				-1.9
3,360,347	-		Pf1N1B4_2992	0.12	-2.5
3,360,347	-		Pf1N1B4_2992	0.12	-2.7
3,360,364	+		Pf1N1B4_2992	0.17	-0.3
3,360,364	+		Pf1N1B4_2992	0.17	+0.7
3,360,365	-		Pf1N1B4_2992	0.17	+0.2
3,360,365	-		Pf1N1B4_2992	0.17	+0.1
3,360,365	-		Pf1N1B4_2992	0.17	-1.3
3,360,365	-		Pf1N1B4_2992	0.17	-0.9
3,360,365	-		Pf1N1B4_2992	0.17	+0.9
3,360,469	+		Pf1N1B4_2992	0.47	-1.6
3,360,469	+		Pf1N1B4_2992	0.47	-0.7
3,360,469	+		Pf1N1B4_2992	0.47	-1.0
3,360,469	+		Pf1N1B4_2992	0.47	-0.9
3,360,469	+		Pf1N1B4_2992	0.47	+1.0
3,360,469	+		Pf1N1B4_2992	0.47	+1.3
3,360,469	+		Pf1N1B4_2992	0.47	-0.6
3,360,469	+		Pf1N1B4_2992	0.47	+0.1
3,360,470	-		Pf1N1B4_2992	0.48	+0.3
3,360,470	-		Pf1N1B4_2992	0.48	-0.5
3,360,470	-		Pf1N1B4_2992	0.48	-0.4
3,360,470	-		Pf1N1B4_2992	0.48	-1.6
3,360,470	-		Pf1N1B4_2992	0.48	-0.9
3,360,470	-		Pf1N1B4_2992	0.48	+0.4
3,360,470	-		Pf1N1B4_2992	0.48	+1.4
3,360,470	-		Pf1N1B4_2992	0.48	-0.0
3,360,584	+		Pf1N1B4_2992	0.81	+0.5
3,360,585	-		Pf1N1B4_2992	0.81	+1.6
3,360,646	+				+2.3
3,360,646	+				-0.3
3,360,646	+				-0.3
3,360,646	+				+1.4
3,360,722	+				+0.0
3,360,722	+				-0.3
3,360,787	-				-0.5
3,360,829	+				-0.4
3,360,830	-				-0.7
3,360,830	-				+0.4
3,360,919	+		Pf1N1B4_2993	0.35	+0.4
3,360,920	-		Pf1N1B4_2993	0.35	-0.3
3,360,920	-		Pf1N1B4_2993	0.35	-0.1
3,360,923	-		Pf1N1B4_2993	0.36	-0.4
3,360,923	-		Pf1N1B4_2993	0.36	-0.9
3,360,923	-		Pf1N1B4_2993	0.36	+0.3
3,360,923	-		Pf1N1B4_2993	0.36	-1.1
3,360,923	-		Pf1N1B4_2993	0.36	-1.4
3,360,923	-		Pf1N1B4_2993	0.36	-1.1
3,360,970	+		Pf1N1B4_2993	0.51	-0.3
3,361,030	-		Pf1N1B4_2993	0.69	+0.3
3,361,030	-		Pf1N1B4_2993	0.69	-1.9
3,361,083	+		Pf1N1B4_2993	0.85	-0.0
3,361,083	+		Pf1N1B4_2993	0.85	-0.1
3,361,084	-				+0.1
3,361,084	-		Pf1N1B4_2993	0.85	-0.7
3,361,250	-				+0.9
3,361,370	-				+1.5
3,361,370	-				-0.8
3,361,375	+				+1.3
3,361,375	+				-0.2
3,361,375	+				+0.3
3,361,375	+				-1.7
3,361,376	-				-0.6
3,361,376	-				-1.1
3,361,376	-				-0.9
3,361,376	-				-0.6
3,361,376	-				-0.0
3,361,395	+				-0.3
3,361,395	+				+0.2
3,361,396	-				-2.9
3,361,396	-				+0.7
3,361,437	-				-0.1
3,361,452	+				+1.0
3,361,453	-				-0.0
3,361,453	-				+0.3
3,361,472	+				-2.3
3,361,472	+				-1.5
3,361,472	+				-0.5
3,361,472	+				+1.6
3,361,473	-				+0.7
3,361,473	-				+1.1
3,361,477	-				-0.3
3,361,477	-				-0.6
3,361,497	+				-0.9
3,361,497	+				-0.3
3,361,498	-				+0.7
3,361,503	+				+1.2
3,361,503	+				-0.4
3,361,503	+				-1.2
3,361,503	+				-2.3
3,361,503	+				-1.3
3,361,504	-				+1.1
3,361,504	-				-3.1
3,361,504	-				+0.0
3,361,504	-				+0.5
3,361,504	-				-0.5
3,361,522	+				-0.3
3,361,523	-				+0.4
3,361,523	-				+0.1
3,361,536	-				+0.2
3,361,536	-				+1.0
3,361,536	-				+0.9
3,361,587	-				+0.1
3,361,643	+				+0.4
3,361,643	+				-0.1
3,361,643	+				-1.6
3,361,643	+				-0.9
3,361,644	-				-0.6
3,361,644	-				-1.9
3,361,656	+				+1.7
3,361,684	+				+0.5
3,361,684	+				+0.7
3,361,684	+				+0.7
3,361,685	-				-0.3
3,361,685	-				+1.2
3,361,685	-				-1.3
3,361,685	-				-0.1
3,361,730	-				+2.3
3,361,739	-				-0.0
3,361,810	+		Pf1N1B4_2994	0.17	+1.3
3,361,846	+		Pf1N1B4_2994	0.19	-0.3
3,361,847	-		Pf1N1B4_2994	0.19	-0.9
3,361,876	+		Pf1N1B4_2994	0.21	-2.3
3,361,877	-		Pf1N1B4_2994	0.21	+1.1
3,361,877	-		Pf1N1B4_2994	0.21	+1.0
3,361,879	+		Pf1N1B4_2994	0.21	+0.1
3,361,879	+		Pf1N1B4_2994	0.21	+0.7
3,361,879	+		Pf1N1B4_2994	0.21	+1.2
3,361,880	-		Pf1N1B4_2994	0.21	-2.1
3,361,880	-		Pf1N1B4_2994	0.21	+0.3
3,361,880	-		Pf1N1B4_2994	0.21	+0.0
3,361,949	+		Pf1N1B4_2994	0.25	-0.9
3,361,955	+		Pf1N1B4_2994	0.26	-0.9
3,361,956	-		Pf1N1B4_2994	0.26	+0.7
3,361,997	-		Pf1N1B4_2994	0.28	+0.1
3,362,014	+		Pf1N1B4_2994	0.29	-0.7
3,362,062	+		Pf1N1B4_2994	0.32	+0.2
3,362,062	+		Pf1N1B4_2994	0.32	+2.7
3,362,062	+		Pf1N1B4_2994	0.32	-1.0
3,362,062	+		Pf1N1B4_2994	0.32	+0.4
3,362,063	-		Pf1N1B4_2994	0.32	+0.2
3,362,064	+		Pf1N1B4_2994	0.32	-2.1
3,362,064	+		Pf1N1B4_2994	0.32	+1.4
3,362,064	+		Pf1N1B4_2994	0.32	-0.3
3,362,064	+		Pf1N1B4_2994	0.32	+0.3
3,362,065	-		Pf1N1B4_2994	0.33	-1.3
3,362,066	+				+0.7
3,362,066	+				+0.7