Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1204

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,367,435	+		Pf1N1B4_1203	0.66	-0.8
1,367,436	-		Pf1N1B4_1203	0.66	-0.8
1,367,436	-		Pf1N1B4_1203	0.66	+0.5
1,367,436	-		Pf1N1B4_1203	0.66	+2.0
1,367,436	-		Pf1N1B4_1203	0.66	-0.5
1,367,439	-				-1.2
1,367,439	-		Pf1N1B4_1203	0.66	+0.5
1,367,439	-		Pf1N1B4_1203	0.66	-0.2
1,367,441	+		Pf1N1B4_1203	0.66	-0.2
1,367,442	-		Pf1N1B4_1203	0.66	+0.4
1,367,454	-				+0.2
1,367,456	+		Pf1N1B4_1203	0.67	-0.3
1,367,456	+		Pf1N1B4_1203	0.67	+0.4
1,367,456	+		Pf1N1B4_1203	0.67	-0.0
1,367,456	+		Pf1N1B4_1203	0.67	+3.6
1,367,457	-		Pf1N1B4_1203	0.67	-0.2
1,367,522	+		Pf1N1B4_1203	0.69	-0.5
1,367,522	+		Pf1N1B4_1203	0.69	-0.3
1,367,522	+		Pf1N1B4_1203	0.69	-1.5
1,367,523	-				-0.4
1,367,523	-		Pf1N1B4_1203	0.69	+1.2
1,367,523	-		Pf1N1B4_1203	0.69	-0.2
1,367,554	+		Pf1N1B4_1203	0.70	-0.2
1,367,555	-		Pf1N1B4_1203	0.70	+0.5
1,367,594	+		Pf1N1B4_1203	0.72	+1.2
1,367,595	-		Pf1N1B4_1203	0.72	-0.0
1,367,628	+		Pf1N1B4_1203	0.73	+1.8
1,367,638	+		Pf1N1B4_1203	0.73	-0.9
1,367,638	+		Pf1N1B4_1203	0.73	-0.4
1,367,638	+		Pf1N1B4_1203	0.73	+1.5
1,367,638	+		Pf1N1B4_1203	0.73	-0.8
1,367,638	+		Pf1N1B4_1203	0.73	-0.9
1,367,639	-		Pf1N1B4_1203	0.73	-1.1
1,367,639	-		Pf1N1B4_1203	0.73	-2.2
1,367,639	-		Pf1N1B4_1203	0.73	+2.1
1,367,639	-		Pf1N1B4_1203	0.73	+0.0
1,367,639	-		Pf1N1B4_1203	0.73	-1.8
1,367,639	-		Pf1N1B4_1203	0.73	-1.1
1,367,639	-		Pf1N1B4_1203	0.73	+0.1
1,367,639	-		Pf1N1B4_1203	0.73	+0.4
1,367,639	-		Pf1N1B4_1203	0.73	-0.4
1,367,639	-		Pf1N1B4_1203	0.73	-0.8
1,367,674	-		Pf1N1B4_1203	0.75	+0.5
1,367,709	-		Pf1N1B4_1203	0.76	-0.1
1,367,709	-		Pf1N1B4_1203	0.76	-0.1
1,367,714	-		Pf1N1B4_1203	0.76	+1.2
1,367,714	-		Pf1N1B4_1203	0.76	-0.1
1,367,740	-		Pf1N1B4_1203	0.77	-0.6
1,367,851	+		Pf1N1B4_1203	0.81	-0.2
1,367,851	+		Pf1N1B4_1203	0.81	+1.2
1,367,851	+		Pf1N1B4_1203	0.81	-0.2
1,367,851	+		Pf1N1B4_1203	0.81	-1.5
1,367,852	-		Pf1N1B4_1203	0.81	+0.1
1,367,852	-		Pf1N1B4_1203	0.81	+0.5
1,367,852	-		Pf1N1B4_1203	0.81	+1.2
1,367,876	-		Pf1N1B4_1203	0.82	-0.8
1,367,949	+		Pf1N1B4_1203	0.85	+1.1
1,367,949	+		Pf1N1B4_1203	0.85	+2.6
1,367,949	+		Pf1N1B4_1203	0.85	-0.4
1,367,949	+				-0.2
1,367,949	+		Pf1N1B4_1203	0.85	+0.2
1,367,950	-		Pf1N1B4_1203	0.85	+0.9
1,367,950	-		Pf1N1B4_1203	0.85	-0.0
1,367,950	-		Pf1N1B4_1203	0.85	-1.2
1,368,002	-		Pf1N1B4_1203	0.87	-0.2
1,368,002	-		Pf1N1B4_1203	0.87	+0.2
1,368,014	+		Pf1N1B4_1203	0.87	+0.5
1,368,028	+				+0.8
1,368,028	+		Pf1N1B4_1203	0.87	-0.6
1,368,041	-		Pf1N1B4_1203	0.88	-0.2
1,368,041	-		Pf1N1B4_1203	0.88	-1.5
1,368,144	+				-1.5
1,368,157	-				+1.0
1,368,165	+				-1.4
1,368,165	+				+1.7
1,368,165	+				-0.5
1,368,166	-				+0.2
1,368,166	-				-0.2
1,368,250	+				+0.5
1,368,250	+				-0.4
1,368,251	-				+0.3
1,368,254	+				-1.2
1,368,254	+				-0.1
1,368,255	-				-1.8
1,368,255	-				-0.8
1,368,255	-				+0.8
1,368,265	+				+0.5
1,368,265	+				-1.0
1,368,265	+				-0.4
1,368,265	+				+0.5
1,368,361	+				+3.1
1,368,368	+				+3.8
1,368,368	+				-0.3
1,368,368	+				+0.1
1,368,387	+				-0.5
1,368,423	+				+0.6
1,368,423	+				-0.9
1,368,424	-				-0.2
1,368,424	-				+1.3
1,368,424	-				+0.5
1,368,524	+		Pf1N1B4_1204	0.30	-1.0
1,368,525	-		Pf1N1B4_1204	0.30	-0.6
1,368,656	+		Pf1N1B4_1204	0.65	+0.5
1,368,657	-		Pf1N1B4_1204	0.66	-0.4
1,368,657	-		Pf1N1B4_1204	0.66	+0.4
1,368,657	-		Pf1N1B4_1204	0.66	+0.2
1,368,657	-		Pf1N1B4_1204	0.66	-1.1
1,368,657	-		Pf1N1B4_1204	0.66	-0.2
1,368,657	-		Pf1N1B4_1204	0.66	-0.3
1,368,719	+		Pf1N1B4_1204	0.82	+0.3
1,368,719	+		Pf1N1B4_1204	0.82	+1.3
1,368,719	+		Pf1N1B4_1204	0.82	-0.8
1,368,720	-		Pf1N1B4_1204	0.83	-0.9
1,368,765	+				-0.3
1,368,817	+				+0.2
1,368,817	+				+0.2
1,368,817	+				+0.8
1,368,817	+				-0.2
1,368,817	+				-0.8
1,368,817	+				+0.8
1,368,818	-				+0.4
1,368,902	+				+0.8
1,368,902	+				-0.8
1,368,919	+				-0.1
1,368,939	+				+0.5
1,368,939	+				+1.1
1,368,940	-				+1.7
1,369,014	-				-0.2
1,369,102	-				-1.0
1,369,123	+				+1.8
1,369,124	-				+0.5
1,369,163	-				-1.0
1,369,163	-				+1.4
1,369,247	+		Pf1N1B4_1205	0.15	+0.8
1,369,247	+		Pf1N1B4_1205	0.15	-0.8
1,369,318	+		Pf1N1B4_1205	0.20	-0.0
1,369,318	+		Pf1N1B4_1205	0.20	+0.1
1,369,318	+		Pf1N1B4_1205	0.20	-0.2
1,369,318	+		Pf1N1B4_1205	0.20	-0.5
1,369,319	-		Pf1N1B4_1205	0.20	-0.5
1,369,406	+		Pf1N1B4_1205	0.27	-0.8
1,369,580	+		Pf1N1B4_1205	0.39	-0.5
1,369,581	-		Pf1N1B4_1205	0.39	-1.2
1,369,581	-		Pf1N1B4_1205	0.39	-0.4