Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1094

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,223,499	+		Pf1N1B4_1093	0.28	-1.0
1,223,499	+		Pf1N1B4_1093	0.28	-0.8
1,223,499	+		Pf1N1B4_1093	0.28	+0.4
1,223,499	+		Pf1N1B4_1093	0.28	+0.8
1,223,499	+		Pf1N1B4_1093	0.28	-0.4
1,223,499	+		Pf1N1B4_1093	0.28	+0.4
1,223,500	-		Pf1N1B4_1093	0.28	-1.7
1,223,703	+		Pf1N1B4_1093	0.52	+0.4
1,223,704	-		Pf1N1B4_1093	0.52	+0.8
1,223,709	+		Pf1N1B4_1093	0.52	+0.2
1,223,710	-		Pf1N1B4_1093	0.53	+1.4
1,223,753	+		Pf1N1B4_1093	0.58	+0.5
1,223,753	+		Pf1N1B4_1093	0.58	-0.5
1,223,879	+		Pf1N1B4_1093	0.72	-0.4
1,223,885	+				-0.8
1,224,151	-				+0.6
1,224,241	+				+2.0
1,224,242	-				+0.4
1,224,271	+				+0.8
1,224,272	-				-1.2
1,224,272	-				+0.8
1,224,283	-				-0.2
1,224,283	-				+0.7
1,224,564	+				+0.2
1,224,775	-		Pf1N1B4_1094	0.12	-1.8
1,225,433	+		Pf1N1B4_1094	0.29	-1.2
1,225,434	-		Pf1N1B4_1094	0.29	-1.2
1,225,607	+		Pf1N1B4_1094	0.34	-0.2
1,225,607	+		Pf1N1B4_1094	0.34	-1.2
1,225,607	+		Pf1N1B4_1094	0.34	-0.5
1,226,271	-		Pf1N1B4_1094	0.51	+1.2
1,226,644	+		Pf1N1B4_1094	0.61	+0.5
1,226,759	+		Pf1N1B4_1094	0.64	+0.5
1,226,760	-		Pf1N1B4_1094	0.64	-2.5
1,227,276	-		Pf1N1B4_1094	0.78	-1.2
1,228,217	+				-0.8
1,228,217	+				-0.8
1,228,218	-				-0.9
1,228,218	-				+1.0
1,228,218	-				-1.4
1,228,218	-				-0.5
1,228,218	-				-0.2
1,228,218	-				-0.9
1,228,232	+				+1.4
1,228,233	-				-2.5
1,228,233	-				-0.6
1,228,233	-				-1.3
1,228,233	-				+0.5
1,228,233	-				-0.8
1,228,233	-				-0.2
1,228,233	-				-0.4
1,228,233	-				-1.1
1,228,233	-				+0.2
1,228,233	-				-0.5
1,228,233	-				+0.2
1,228,233	-				-0.8
1,228,233	-				-1.2
1,228,233	-				+0.6
1,228,233	-				+1.8
1,228,233	-				-0.2
1,228,269	+				-1.4
1,228,270	-				-1.2
1,228,347	+		Pf1N1B4_1095	0.10	-1.8
1,228,347	+		Pf1N1B4_1095	0.10	+1.2
1,228,348	-		Pf1N1B4_1095	0.10	-0.4
1,228,348	-		Pf1N1B4_1095	0.10	-2.4
1,228,348	-		Pf1N1B4_1095	0.10	+0.2
1,228,348	-		Pf1N1B4_1095	0.10	-0.3
1,228,348	-		Pf1N1B4_1095	0.10	+0.2
1,228,349	+		Pf1N1B4_1095	0.10	-0.8
1,228,350	-		Pf1N1B4_1095	0.10	-0.6
1,228,350	-		Pf1N1B4_1095	0.10	+0.8
1,228,350	-		Pf1N1B4_1095	0.10	-2.2
1,228,350	-		Pf1N1B4_1095	0.10	+1.8
1,228,365	-		Pf1N1B4_1095	0.11	+0.1
1,228,403	+		Pf1N1B4_1095	0.14	+0.8
1,228,404	-		Pf1N1B4_1095	0.14	-0.2
1,228,404	-		Pf1N1B4_1095	0.14	-0.9
1,228,638	+		Pf1N1B4_1095	0.30	-1.3
1,228,638	+		Pf1N1B4_1095	0.30	+0.0
1,228,638	+		Pf1N1B4_1095	0.30	+0.8
1,228,639	-		Pf1N1B4_1095	0.30	+0.1
1,228,639	-		Pf1N1B4_1095	0.30	-0.5
1,228,639	-		Pf1N1B4_1095	0.30	+0.4
1,228,639	-		Pf1N1B4_1095	0.30	-1.4
1,228,639	-		Pf1N1B4_1095	0.30	+0.0
1,228,639	-		Pf1N1B4_1095	0.30	+1.4
1,228,653	+		Pf1N1B4_1095	0.31	+0.4
1,228,654	-		Pf1N1B4_1095	0.31	-0.4
1,228,796	+		Pf1N1B4_1095	0.41	-1.5
1,228,797	-		Pf1N1B4_1095	0.41	-0.4
1,228,816	+		Pf1N1B4_1095	0.42	-1.7
1,228,816	+		Pf1N1B4_1095	0.42	-0.9
1,228,817	-		Pf1N1B4_1095	0.42	+0.1
1,228,817	-		Pf1N1B4_1095	0.42	+0.8
1,228,859	+		Pf1N1B4_1095	0.45	+0.4
1,228,859	+		Pf1N1B4_1095	0.45	-2.4
1,228,860	-		Pf1N1B4_1095	0.45	+0.2
1,228,860	-		Pf1N1B4_1095	0.45	-0.5
1,228,860	-		Pf1N1B4_1095	0.45	-0.8
1,228,860	-		Pf1N1B4_1095	0.45	-0.4
1,228,890	-		Pf1N1B4_1095	0.47	+1.8
1,228,890	-		Pf1N1B4_1095	0.47	-0.3
1,228,890	-		Pf1N1B4_1095	0.47	-0.1
1,228,890	-		Pf1N1B4_1095	0.47	-1.1
1,229,017	+		Pf1N1B4_1095	0.56	+0.0
1,229,039	+		Pf1N1B4_1095	0.58	+0.4
1,229,039	+		Pf1N1B4_1095	0.58	-0.2
1,229,039	+		Pf1N1B4_1095	0.58	+0.2
1,229,040	-		Pf1N1B4_1095	0.58	-0.2
1,229,040	-		Pf1N1B4_1095	0.58	-0.3
1,229,040	-		Pf1N1B4_1095	0.58	-1.3
1,229,040	-		Pf1N1B4_1095	0.58	-1.0
1,229,040	-		Pf1N1B4_1095	0.58	-1.0
1,229,040	-		Pf1N1B4_1095	0.58	-0.5
1,229,040	-		Pf1N1B4_1095	0.58	-1.0
1,229,040	-		Pf1N1B4_1095	0.58	-0.7
1,229,106	-		Pf1N1B4_1095	0.62	+0.3