Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21730 and HSERO_RS21735 are separated by 41 nucleotides HSERO_RS21735 and HSERO_RS21740 are separated by 134 nucleotides HSERO_RS21740 and HSERO_RS21745 are separated by 199 nucleotides HSERO_RS21745 and HSERO_RS21750 are separated by 20 nucleotides
HSERO_RS21730: HSERO_RS21730 - short-chain dehydrogenase, at 4,975,307 to 4,976,089
_RS21730
HSERO_RS21735: HSERO_RS21735 - hypothetical protein, at 4,976,131 to 4,976,415
_RS21735
HSERO_RS21740: HSERO_RS21740 - methionine synthase, at 4,976,550 to 4,980,293
_RS21740
HSERO_RS21745: HSERO_RS21745 - 5'-methylthioadenosine nucleosidase, at 4,980,493 to 4,981,077
_RS21745
HSERO_RS21750: HSERO_RS21750 - methionyl-tRNA formyltransferase, at 4,981,098 to 4,982,051
_RS21750
Position (kb) 4976
4977
4978
4979
4980
4981 Strain fitness (log2 ratio) -2
-1
0
1 at 4975.602 kb on + strand, within HSERO_RS21730 at 4975.757 kb on + strand, within HSERO_RS21730 at 4975.819 kb on + strand, within HSERO_RS21730 at 4975.878 kb on - strand, within HSERO_RS21730 at 4975.906 kb on + strand, within HSERO_RS21730 at 4976.128 kb on + strand at 4976.136 kb on - strand at 4976.136 kb on - strand at 4976.361 kb on - strand, within HSERO_RS21735 at 4976.380 kb on - strand, within HSERO_RS21735 at 4976.843 kb on + strand at 4977.090 kb on + strand, within HSERO_RS21740 at 4977.187 kb on + strand, within HSERO_RS21740 at 4977.368 kb on + strand, within HSERO_RS21740 at 4977.540 kb on + strand, within HSERO_RS21740 at 4977.579 kb on - strand, within HSERO_RS21740 at 4977.970 kb on + strand, within HSERO_RS21740 at 4978.157 kb on - strand, within HSERO_RS21740 at 4978.321 kb on - strand, within HSERO_RS21740 at 4978.479 kb on + strand, within HSERO_RS21740 at 4978.522 kb on - strand, within HSERO_RS21740 at 4978.608 kb on + strand, within HSERO_RS21740 at 4978.661 kb on - strand, within HSERO_RS21740 at 4978.926 kb on + strand, within HSERO_RS21740 at 4978.934 kb on - strand, within HSERO_RS21740 at 4979.085 kb on + strand, within HSERO_RS21740 at 4979.394 kb on + strand, within HSERO_RS21740 at 4979.617 kb on - strand, within HSERO_RS21740 at 4979.706 kb on - strand, within HSERO_RS21740 at 4979.752 kb on + strand, within HSERO_RS21740 at 4979.760 kb on - strand, within HSERO_RS21740 at 4979.777 kb on - strand, within HSERO_RS21740 at 4980.037 kb on + strand at 4980.175 kb on + strand at 4980.205 kb on - strand at 4980.265 kb on - strand at 4980.280 kb on - strand at 4980.381 kb on - strand at 4980.390 kb on - strand at 4980.686 kb on - strand, within HSERO_RS21745 at 4980.716 kb on + strand, within HSERO_RS21745 at 4980.928 kb on + strand, within HSERO_RS21745 at 4981.066 kb on + strand at 4981.091 kb on + strand at 4981.094 kb on - strand at 4981.104 kb on - strand at 4981.104 kb on - strand at 4981.104 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,975,602 + HSERO_RS21730 0.38 +0.3 4,975,757 + HSERO_RS21730 0.57 +0.1 4,975,819 + HSERO_RS21730 0.65 -1.0 4,975,878 - HSERO_RS21730 0.73 -0.7 4,975,906 + HSERO_RS21730 0.77 +0.1 4,976,128 + -0.0 4,976,136 - +0.2 4,976,136 - -0.1 4,976,361 - HSERO_RS21735 0.81 +0.7 4,976,380 - HSERO_RS21735 0.87 -0.2 4,976,843 + -0.4 4,977,090 + HSERO_RS21740 0.14 +0.6 4,977,187 + HSERO_RS21740 0.17 -1.0 4,977,368 + HSERO_RS21740 0.22 -0.7 4,977,540 + HSERO_RS21740 0.26 -0.5 4,977,579 - HSERO_RS21740 0.27 -0.9 4,977,970 + HSERO_RS21740 0.38 -2.3 4,978,157 - HSERO_RS21740 0.43 -0.8 4,978,321 - HSERO_RS21740 0.47 -2.7 4,978,479 + HSERO_RS21740 0.52 -2.3 4,978,522 - HSERO_RS21740 0.53 -0.8 4,978,608 + HSERO_RS21740 0.55 -1.7 4,978,661 - HSERO_RS21740 0.56 -0.1 4,978,926 + HSERO_RS21740 0.63 -0.5 4,978,934 - HSERO_RS21740 0.64 -0.2 4,979,085 + HSERO_RS21740 0.68 +0.9 4,979,394 + HSERO_RS21740 0.76 -2.4 4,979,617 - HSERO_RS21740 0.82 -0.6 4,979,706 - HSERO_RS21740 0.84 +0.2 4,979,752 + HSERO_RS21740 0.86 -0.8 4,979,760 - HSERO_RS21740 0.86 -1.5 4,979,777 - HSERO_RS21740 0.86 +0.3 4,980,037 + -1.3 4,980,175 + +1.0 4,980,205 - -0.6 4,980,265 - +0.4 4,980,280 - -0.1 4,980,381 - -0.0 4,980,390 - -1.1 4,980,686 - HSERO_RS21745 0.33 -0.6 4,980,716 + HSERO_RS21745 0.38 -0.2 4,980,928 + HSERO_RS21745 0.74 -0.3 4,981,066 + +0.0 4,981,091 + -0.7 4,981,094 - -0.1 4,981,104 - +0.0 4,981,104 - -0.3 4,981,104 - -0.0
Or see this region's nucleotide sequence