Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21425 and HSERO_RS21430 overlap by 4 nucleotides HSERO_RS21430 and HSERO_RS21435 are separated by 153 nucleotides HSERO_RS21435 and HSERO_RS21440 are separated by 294 nucleotides
HSERO_RS21425: HSERO_RS21425 - 5,10-methylenetetrahydrofolate reductase, at 4,905,309 to 4,906,157
_RS21425
HSERO_RS21430: HSERO_RS21430 - membrane protein, at 4,906,154 to 4,906,507
_RS21430
HSERO_RS21435: HSERO_RS21435 - S-adenosyl-L-homocysteine hydrolase, at 4,906,661 to 4,908,085
_RS21435
HSERO_RS21440: HSERO_RS21440 - S-adenosylmethionine synthetase, at 4,908,380 to 4,909,543
_RS21440
Position (kb) 4906
4907
4908
4909 Strain fitness (log2 ratio) -2
-1
0
1 at 4905.671 kb on - strand, within HSERO_RS21425 at 4905.863 kb on + strand, within HSERO_RS21425 at 4905.917 kb on + strand, within HSERO_RS21425 at 4905.960 kb on + strand, within HSERO_RS21425 at 4905.989 kb on - strand, within HSERO_RS21425 at 4906.015 kb on + strand, within HSERO_RS21425 at 4906.206 kb on + strand, within HSERO_RS21430 at 4906.209 kb on + strand, within HSERO_RS21430 at 4906.234 kb on - strand, within HSERO_RS21430 at 4906.443 kb on - strand, within HSERO_RS21430 at 4906.456 kb on - strand, within HSERO_RS21430 at 4906.498 kb on - strand at 4906.572 kb on + strand at 4906.655 kb on - strand at 4906.665 kb on - strand at 4908.168 kb on - strand at 4908.292 kb on - strand at 4908.297 kb on + strand at 4908.297 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 4,905,671 - HSERO_RS21425 0.43 -2.2 4,905,863 + HSERO_RS21425 0.65 -0.2 4,905,917 + HSERO_RS21425 0.72 -1.8 4,905,960 + HSERO_RS21425 0.77 -1.8 4,905,989 - HSERO_RS21425 0.80 +1.2 4,906,015 + HSERO_RS21425 0.83 -1.6 4,906,206 + HSERO_RS21430 0.15 -0.6 4,906,209 + HSERO_RS21430 0.16 -0.9 4,906,234 - HSERO_RS21430 0.23 -0.3 4,906,443 - HSERO_RS21430 0.82 -0.9 4,906,456 - HSERO_RS21430 0.85 +0.3 4,906,498 - -0.8 4,906,572 + -0.6 4,906,655 - -0.2 4,906,665 - +0.2 4,908,168 - -0.1 4,908,292 - +0.3 4,908,297 + +0.3 4,908,297 + -0.0
Or see this region's nucleotide sequence