Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02800 and HSERO_RS02805 are separated by 26 nucleotides HSERO_RS02805 and HSERO_RS02810 are separated by 143 nucleotides
HSERO_RS02800: HSERO_RS02800 - hypothetical protein, at 615,746 to 616,729
_RS02800
HSERO_RS02805: HSERO_RS02805 - 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase, at 616,756 to 617,784
_RS02805
HSERO_RS02810: HSERO_RS02810 - methyltransferase, at 617,928 to 618,605
_RS02810
Position (kb) 616
617
618 Strain fitness (log2 ratio) -1
0
1 at 616.236 kb on - strand, within HSERO_RS02800 at 616.694 kb on - strand at 616.827 kb on + strand at 616.853 kb on + strand at 617.015 kb on - strand, within HSERO_RS02805 at 617.341 kb on + strand, within HSERO_RS02805 at 617.362 kb on + strand, within HSERO_RS02805 at 617.383 kb on + strand, within HSERO_RS02805 at 617.412 kb on + strand, within HSERO_RS02805 at 617.420 kb on - strand, within HSERO_RS02805 at 617.441 kb on + strand, within HSERO_RS02805 at 617.612 kb on + strand, within HSERO_RS02805 at 617.670 kb on + strand, within HSERO_RS02805 at 617.744 kb on + strand at 617.841 kb on + strand at 617.841 kb on + strand at 617.933 kb on - strand at 617.936 kb on - strand at 617.936 kb on - strand at 617.950 kb on - strand at 618.122 kb on + strand, within HSERO_RS02810 at 618.130 kb on - strand at 618.199 kb on - strand, within HSERO_RS02810 at 618.317 kb on + strand, within HSERO_RS02810 at 618.352 kb on - strand, within HSERO_RS02810 at 618.353 kb on - strand, within HSERO_RS02810 at 618.404 kb on + strand, within HSERO_RS02810 at 618.412 kb on - strand at 618.444 kb on + strand, within HSERO_RS02810 at 618.456 kb on + strand, within HSERO_RS02810 at 618.560 kb on - strand at 618.609 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 616,236 - HSERO_RS02800 0.50 +0.0 616,694 - +0.5 616,827 + -0.5 616,853 + -0.8 617,015 - HSERO_RS02805 0.25 -0.8 617,341 + HSERO_RS02805 0.57 +0.2 617,362 + HSERO_RS02805 0.59 +0.7 617,383 + HSERO_RS02805 0.61 -0.8 617,412 + HSERO_RS02805 0.64 +0.1 617,420 - HSERO_RS02805 0.65 +0.5 617,441 + HSERO_RS02805 0.67 +0.0 617,612 + HSERO_RS02805 0.83 +0.5 617,670 + HSERO_RS02805 0.89 +0.1 617,744 + +0.8 617,841 + -0.2 617,841 + -0.2 617,933 - -0.5 617,936 - -1.0 617,936 - +0.2 617,950 - +0.0 618,122 + HSERO_RS02810 0.29 +0.1 618,130 - +1.6 618,199 - HSERO_RS02810 0.40 +0.4 618,317 + HSERO_RS02810 0.57 -0.5 618,352 - HSERO_RS02810 0.63 +0.3 618,353 - HSERO_RS02810 0.63 +0.5 618,404 + HSERO_RS02810 0.70 +0.3 618,412 - +1.5 618,444 + HSERO_RS02810 0.76 +0.6 618,456 + HSERO_RS02810 0.78 +0.2 618,560 - -0.1 618,609 + +0.4
Or see this region's nucleotide sequence