Experiment: Zinc 0.01953125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pcnB and Synpcc7942_0792 are separated by 43 nucleotides Synpcc7942_0792 and Synpcc7942_0793 are separated by 102 nucleotides Synpcc7942_0793 and Synpcc7942_0794 are separated by 198 nucleotides
Synpcc7942_0791: pcnB - polyA polymerase, at 785,973 to 787,211
pcnB
Synpcc7942_0792: Synpcc7942_0792 - putative multidrug efflux MFS transporter, at 787,255 to 788,490
_0792
Synpcc7942_0793: Synpcc7942_0793 - hypothetical protein, at 788,593 to 789,261
_0793
Synpcc7942_0794: Synpcc7942_0794 - membrane-associated 30 kD protein-like, at 789,460 to 790,233
_0794
Position (kb) 787
788
789 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5
6 at 787.168 kb on + strand at 787.180 kb on + strand at 787.188 kb on - strand at 787.188 kb on - strand at 787.188 kb on - strand at 787.188 kb on - strand at 787.228 kb on + strand at 787.238 kb on + strand at 787.238 kb on + strand at 787.246 kb on - strand at 787.246 kb on - strand at 787.246 kb on - strand at 787.246 kb on - strand at 787.246 kb on - strand at 787.246 kb on - strand at 787.247 kb on - strand at 787.247 kb on - strand at 787.247 kb on - strand at 787.247 kb on - strand at 787.262 kb on - strand at 787.285 kb on - strand at 787.285 kb on - strand at 787.294 kb on - strand at 787.294 kb on - strand at 787.294 kb on - strand at 787.294 kb on - strand at 787.317 kb on - strand at 787.321 kb on + strand at 787.333 kb on + strand at 787.334 kb on + strand at 787.334 kb on - strand at 787.341 kb on - strand at 787.347 kb on - strand at 787.353 kb on - strand at 787.380 kb on + strand, within Synpcc7942_0792 at 787.386 kb on - strand, within Synpcc7942_0792 at 787.395 kb on + strand, within Synpcc7942_0792 at 787.411 kb on - strand, within Synpcc7942_0792 at 787.449 kb on + strand, within Synpcc7942_0792 at 787.449 kb on + strand, within Synpcc7942_0792 at 787.449 kb on + strand, within Synpcc7942_0792 at 787.449 kb on + strand, within Synpcc7942_0792 at 787.476 kb on - strand, within Synpcc7942_0792 at 787.477 kb on - strand, within Synpcc7942_0792 at 787.517 kb on + strand, within Synpcc7942_0792 at 787.525 kb on - strand, within Synpcc7942_0792 at 787.525 kb on - strand, within Synpcc7942_0792 at 787.525 kb on - strand, within Synpcc7942_0792 at 787.528 kb on + strand, within Synpcc7942_0792 at 787.536 kb on - strand, within Synpcc7942_0792 at 787.538 kb on + strand, within Synpcc7942_0792 at 787.556 kb on + strand, within Synpcc7942_0792 at 787.556 kb on + strand, within Synpcc7942_0792 at 787.559 kb on - strand, within Synpcc7942_0792 at 787.634 kb on - strand, within Synpcc7942_0792 at 787.653 kb on - strand, within Synpcc7942_0792 at 787.684 kb on - strand, within Synpcc7942_0792 at 787.692 kb on + strand, within Synpcc7942_0792 at 787.692 kb on + strand, within Synpcc7942_0792 at 787.694 kb on + strand, within Synpcc7942_0792 at 787.700 kb on - strand, within Synpcc7942_0792 at 787.718 kb on + strand, within Synpcc7942_0792 at 787.718 kb on + strand, within Synpcc7942_0792 at 787.718 kb on + strand, within Synpcc7942_0792 at 787.724 kb on + strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.726 kb on - strand, within Synpcc7942_0792 at 787.781 kb on + strand, within Synpcc7942_0792 at 787.782 kb on - strand, within Synpcc7942_0792 at 787.789 kb on - strand, within Synpcc7942_0792 at 787.799 kb on - strand, within Synpcc7942_0792 at 787.801 kb on + strand, within Synpcc7942_0792 at 787.806 kb on + strand, within Synpcc7942_0792 at 787.806 kb on + strand, within Synpcc7942_0792 at 787.806 kb on + strand, within Synpcc7942_0792 at 787.806 kb on + strand, within Synpcc7942_0792 at 787.806 kb on + strand, within Synpcc7942_0792 at 787.814 kb on - strand, within Synpcc7942_0792 at 787.814 kb on - strand, within Synpcc7942_0792 at 787.814 kb on - strand, within Synpcc7942_0792 at 787.814 kb on - strand, within Synpcc7942_0792 at 787.834 kb on + strand, within Synpcc7942_0792 at 787.837 kb on - strand, within Synpcc7942_0792 at 787.837 kb on - strand, within Synpcc7942_0792 at 787.842 kb on - strand, within Synpcc7942_0792 at 787.843 kb on - strand, within Synpcc7942_0792 at 787.863 kb on + strand at 787.897 kb on + strand, within Synpcc7942_0792 at 787.914 kb on + strand, within Synpcc7942_0792 at 787.919 kb on + strand, within Synpcc7942_0792 at 787.919 kb on + strand at 787.939 kb on + strand, within Synpcc7942_0792 at 787.940 kb on - strand, within Synpcc7942_0792 at 787.966 kb on + strand, within Synpcc7942_0792 at 787.966 kb on + strand, within Synpcc7942_0792 at 787.974 kb on - strand, within Synpcc7942_0792 at 787.978 kb on + strand, within Synpcc7942_0792 at 787.978 kb on + strand, within Synpcc7942_0792 at 787.986 kb on - strand, within Synpcc7942_0792 at 787.989 kb on - strand, within Synpcc7942_0792 at 787.994 kb on + strand, within Synpcc7942_0792 at 788.021 kb on + strand, within Synpcc7942_0792 at 788.034 kb on - strand, within Synpcc7942_0792 at 788.039 kb on - strand, within Synpcc7942_0792 at 788.039 kb on - strand, within Synpcc7942_0792 at 788.075 kb on + strand, within Synpcc7942_0792 at 788.129 kb on - strand, within Synpcc7942_0792 at 788.132 kb on + strand, within Synpcc7942_0792 at 788.140 kb on - strand, within Synpcc7942_0792 at 788.147 kb on + strand, within Synpcc7942_0792 at 788.157 kb on + strand, within Synpcc7942_0792 at 788.157 kb on - strand, within Synpcc7942_0792 at 788.157 kb on - strand, within Synpcc7942_0792 at 788.193 kb on - strand, within Synpcc7942_0792 at 788.222 kb on - strand, within Synpcc7942_0792 at 788.246 kb on - strand, within Synpcc7942_0792 at 788.249 kb on + strand, within Synpcc7942_0792 at 788.271 kb on + strand, within Synpcc7942_0792 at 788.303 kb on + strand, within Synpcc7942_0792 at 788.462 kb on - strand at 788.469 kb on + strand at 788.469 kb on + strand at 788.469 kb on + strand at 788.477 kb on + strand at 788.543 kb on + strand at 788.574 kb on - strand at 788.590 kb on + strand at 788.590 kb on + strand at 788.593 kb on - strand at 788.593 kb on - strand at 788.599 kb on - strand at 788.614 kb on + strand at 788.614 kb on + strand at 788.656 kb on - strand at 788.671 kb on - strand, within Synpcc7942_0793 at 788.683 kb on + strand, within Synpcc7942_0793 at 788.687 kb on + strand, within Synpcc7942_0793 at 788.691 kb on - strand, within Synpcc7942_0793 at 788.702 kb on + strand, within Synpcc7942_0793 at 788.712 kb on - strand, within Synpcc7942_0793 at 788.719 kb on + strand, within Synpcc7942_0793 at 788.753 kb on + strand, within Synpcc7942_0793 at 788.756 kb on - strand, within Synpcc7942_0793 at 788.758 kb on + strand, within Synpcc7942_0793 at 788.856 kb on - strand, within Synpcc7942_0793 at 788.905 kb on - strand, within Synpcc7942_0793 at 788.905 kb on - strand, within Synpcc7942_0793 at 788.906 kb on - strand, within Synpcc7942_0793 at 788.924 kb on - strand, within Synpcc7942_0793 at 788.928 kb on + strand, within Synpcc7942_0793 at 788.928 kb on + strand, within Synpcc7942_0793 at 788.936 kb on - strand at 788.989 kb on + strand, within Synpcc7942_0793 at 788.997 kb on + strand, within Synpcc7942_0793 at 789.019 kb on + strand, within Synpcc7942_0793 at 789.027 kb on - strand, within Synpcc7942_0793 at 789.027 kb on - strand, within Synpcc7942_0793 at 789.027 kb on - strand, within Synpcc7942_0793 at 789.060 kb on + strand, within Synpcc7942_0793 at 789.060 kb on + strand, within Synpcc7942_0793 at 789.063 kb on - strand, within Synpcc7942_0793 at 789.068 kb on - strand, within Synpcc7942_0793 at 789.068 kb on - strand, within Synpcc7942_0793 at 789.068 kb on - strand, within Synpcc7942_0793 at 789.068 kb on - strand, within Synpcc7942_0793 at 789.070 kb on + strand, within Synpcc7942_0793 at 789.080 kb on - strand, within Synpcc7942_0793 at 789.089 kb on + strand, within Synpcc7942_0793 at 789.100 kb on + strand, within Synpcc7942_0793 at 789.101 kb on + strand, within Synpcc7942_0793 at 789.123 kb on + strand, within Synpcc7942_0793 at 789.131 kb on - strand, within Synpcc7942_0793 at 789.135 kb on + strand, within Synpcc7942_0793 at 789.144 kb on + strand, within Synpcc7942_0793 at 789.162 kb on - strand, within Synpcc7942_0793 at 789.189 kb on + strand, within Synpcc7942_0793 at 789.219 kb on + strand at 789.250 kb on + strand at 789.285 kb on + strand at 789.291 kb on + strand at 789.322 kb on + strand at 789.330 kb on - strand at 789.335 kb on - strand at 789.457 kb on + strand at 789.457 kb on + strand at 789.457 kb on + strand at 789.465 kb on - strand at 789.465 kb on - strand at 789.465 kb on - strand at 789.465 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.01953125 mM remove 787,168 + +1.5 787,180 + +3.6 787,188 - +1.4 787,188 - +1.4 787,188 - -0.3 787,188 - +1.7 787,228 + -0.4 787,238 + -1.6 787,238 + -0.7 787,246 - +0.0 787,246 - +2.1 787,246 - +2.8 787,246 - -0.4 787,246 - +1.5 787,246 - -1.0 787,247 - +1.6 787,247 - +2.5 787,247 - -2.0 787,247 - +0.0 787,262 - +0.4 787,285 - -1.7 787,285 - +3.4 787,294 - -1.0 787,294 - -1.0 787,294 - +1.3 787,294 - +1.7 787,317 - +0.4 787,321 + -1.0 787,333 + -1.0 787,334 + +0.6 787,334 - -0.4 787,341 - +0.7 787,347 - -1.6 787,353 - +0.7 787,380 + Synpcc7942_0792 0.10 -2.0 787,386 - Synpcc7942_0792 0.11 -2.0 787,395 + Synpcc7942_0792 0.11 +2.7 787,411 - Synpcc7942_0792 0.13 +0.1 787,449 + Synpcc7942_0792 0.16 +6.3 787,449 + Synpcc7942_0792 0.16 -2.0 787,449 + Synpcc7942_0792 0.16 -0.2 787,449 + Synpcc7942_0792 0.16 -3.3 787,476 - Synpcc7942_0792 0.18 +1.9 787,477 - Synpcc7942_0792 0.18 -2.0 787,517 + Synpcc7942_0792 0.21 +1.8 787,525 - Synpcc7942_0792 0.22 -2.0 787,525 - Synpcc7942_0792 0.22 +0.6 787,525 - Synpcc7942_0792 0.22 -1.0 787,528 + Synpcc7942_0792 0.22 +1.6 787,536 - Synpcc7942_0792 0.23 -0.6 787,538 + Synpcc7942_0792 0.23 +3.3 787,556 + Synpcc7942_0792 0.24 +0.0 787,556 + Synpcc7942_0792 0.24 +0.6 787,559 - Synpcc7942_0792 0.25 +1.1 787,634 - Synpcc7942_0792 0.31 +0.0 787,653 - Synpcc7942_0792 0.32 -1.0 787,684 - Synpcc7942_0792 0.35 +0.4 787,692 + Synpcc7942_0792 0.35 -2.0 787,692 + Synpcc7942_0792 0.35 +1.5 787,694 + Synpcc7942_0792 0.36 +1.8 787,700 - Synpcc7942_0792 0.36 +0.0 787,718 + Synpcc7942_0792 0.37 +4.0 787,718 + Synpcc7942_0792 0.37 +1.1 787,718 + Synpcc7942_0792 0.37 -1.0 787,724 + Synpcc7942_0792 0.38 +3.9 787,726 - Synpcc7942_0792 0.38 +2.0 787,726 - Synpcc7942_0792 0.38 -0.3 787,726 - Synpcc7942_0792 0.38 +0.0 787,726 - Synpcc7942_0792 0.38 +2.2 787,726 - Synpcc7942_0792 0.38 +0.0 787,726 - Synpcc7942_0792 0.38 +1.5 787,726 - Synpcc7942_0792 0.38 -1.0 787,781 + Synpcc7942_0792 0.43 +1.2 787,782 - Synpcc7942_0792 0.43 +0.6 787,789 - Synpcc7942_0792 0.43 +1.4 787,799 - Synpcc7942_0792 0.44 +1.7 787,801 + Synpcc7942_0792 0.44 +1.2 787,806 + Synpcc7942_0792 0.45 +2.0 787,806 + Synpcc7942_0792 0.45 -0.1 787,806 + Synpcc7942_0792 0.45 -1.7 787,806 + Synpcc7942_0792 0.45 -1.0 787,806 + Synpcc7942_0792 0.45 -1.0 787,814 - Synpcc7942_0792 0.45 +1.9 787,814 - Synpcc7942_0792 0.45 +2.5 787,814 - Synpcc7942_0792 0.45 +1.1 787,814 - Synpcc7942_0792 0.45 +0.8 787,834 + Synpcc7942_0792 0.47 +1.6 787,837 - Synpcc7942_0792 0.47 +2.4 787,837 - Synpcc7942_0792 0.47 +1.0 787,842 - Synpcc7942_0792 0.47 +1.7 787,843 - Synpcc7942_0792 0.48 +2.9 787,863 + -1.0 787,897 + Synpcc7942_0792 0.52 -1.0 787,914 + Synpcc7942_0792 0.53 +0.8 787,919 + Synpcc7942_0792 0.54 -1.0 787,919 + -2.6 787,939 + Synpcc7942_0792 0.55 +2.7 787,940 - Synpcc7942_0792 0.55 +1.6 787,966 + Synpcc7942_0792 0.58 +3.3 787,966 + Synpcc7942_0792 0.58 +0.9 787,974 - Synpcc7942_0792 0.58 -0.4 787,978 + Synpcc7942_0792 0.58 +3.1 787,978 + Synpcc7942_0792 0.58 -2.0 787,986 - Synpcc7942_0792 0.59 -2.0 787,989 - Synpcc7942_0792 0.59 -3.0 787,994 + Synpcc7942_0792 0.60 +1.5 788,021 + Synpcc7942_0792 0.62 -1.0 788,034 - Synpcc7942_0792 0.63 +0.7 788,039 - Synpcc7942_0792 0.63 +1.0 788,039 - Synpcc7942_0792 0.63 +2.4 788,075 + Synpcc7942_0792 0.66 -1.0 788,129 - Synpcc7942_0792 0.71 -1.0 788,132 + Synpcc7942_0792 0.71 +2.2 788,140 - Synpcc7942_0792 0.72 +1.4 788,147 + Synpcc7942_0792 0.72 -1.0 788,157 + Synpcc7942_0792 0.73 -2.0 788,157 - Synpcc7942_0792 0.73 -4.4 788,157 - Synpcc7942_0792 0.73 +1.5 788,193 - Synpcc7942_0792 0.76 +3.6 788,222 - Synpcc7942_0792 0.78 +0.0 788,246 - Synpcc7942_0792 0.80 +1.8 788,249 + Synpcc7942_0792 0.80 +0.4 788,271 + Synpcc7942_0792 0.82 +0.9 788,303 + Synpcc7942_0792 0.85 -1.0 788,462 - +0.4 788,469 + +0.7 788,469 + +1.6 788,469 + +1.5 788,477 + +0.6 788,543 + -0.4 788,574 - -1.0 788,590 + +1.3 788,590 + -1.0 788,593 - -2.0 788,593 - -0.6 788,599 - +2.0 788,614 + +1.1 788,614 + +2.4 788,656 - +2.2 788,671 - Synpcc7942_0793 0.12 +1.7 788,683 + Synpcc7942_0793 0.13 +0.8 788,687 + Synpcc7942_0793 0.14 -0.6 788,691 - Synpcc7942_0793 0.15 +3.6 788,702 + Synpcc7942_0793 0.16 +0.0 788,712 - Synpcc7942_0793 0.18 -1.6 788,719 + Synpcc7942_0793 0.19 +2.5 788,753 + Synpcc7942_0793 0.24 -1.0 788,756 - Synpcc7942_0793 0.24 +1.5 788,758 + Synpcc7942_0793 0.25 +0.6 788,856 - Synpcc7942_0793 0.39 -0.2 788,905 - Synpcc7942_0793 0.47 +0.4 788,905 - Synpcc7942_0793 0.47 -1.0 788,906 - Synpcc7942_0793 0.47 +1.8 788,924 - Synpcc7942_0793 0.49 +1.8 788,928 + Synpcc7942_0793 0.50 -3.3 788,928 + Synpcc7942_0793 0.50 -0.6 788,936 - -2.0 788,989 + Synpcc7942_0793 0.59 +1.1 788,997 + Synpcc7942_0793 0.60 +1.4 789,019 + Synpcc7942_0793 0.64 +0.4 789,027 - Synpcc7942_0793 0.65 +1.8 789,027 - Synpcc7942_0793 0.65 +0.7 789,027 - Synpcc7942_0793 0.65 +2.5 789,060 + Synpcc7942_0793 0.70 +1.7 789,060 + Synpcc7942_0793 0.70 -0.1 789,063 - Synpcc7942_0793 0.70 +0.0 789,068 - Synpcc7942_0793 0.71 +2.8 789,068 - Synpcc7942_0793 0.71 +1.4 789,068 - Synpcc7942_0793 0.71 +2.4 789,068 - Synpcc7942_0793 0.71 +0.9 789,070 + Synpcc7942_0793 0.71 -0.4 789,080 - Synpcc7942_0793 0.73 +1.2 789,089 + Synpcc7942_0793 0.74 -2.0 789,100 + Synpcc7942_0793 0.76 +0.9 789,101 + Synpcc7942_0793 0.76 +1.2 789,123 + Synpcc7942_0793 0.79 +0.8 789,131 - Synpcc7942_0793 0.80 -2.0 789,135 + Synpcc7942_0793 0.81 +1.6 789,144 + Synpcc7942_0793 0.82 -1.7 789,162 - Synpcc7942_0793 0.85 -1.0 789,189 + Synpcc7942_0793 0.89 +2.6 789,219 + -0.3 789,250 + +1.5 789,285 + -3.8 789,291 + -0.2 789,322 + -1.6 789,330 - +2.3 789,335 - +0.6 789,457 + +0.0 789,457 + -1.0 789,457 + +4.2 789,465 - -4.8 789,465 - +0.4 789,465 - +1.3 789,465 - +1.4
Or see this region's nucleotide sequence