Experiment: Zinc 0.01953125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Synpcc7942_0728 and Synpcc7942_0729 are separated by 24 nucleotides Synpcc7942_0729 and Synpcc7942_0730 are separated by 214 nucleotides Synpcc7942_0730 and Synpcc7942_0731 are separated by 308 nucleotides
Synpcc7942_0728: Synpcc7942_0728 - hypothetical protein, at 723,236 to 723,781
_0728
Synpcc7942_0729: Synpcc7942_0729 - hypothetical protein, at 723,806 to 724,411
_0729
Synpcc7942_0730: Synpcc7942_0730 - hypothetical protein, at 724,626 to 725,165
_0730
Synpcc7942_0731: Synpcc7942_0731 - putative phage terminase large subunit, at 725,474 to 727,354
_0731
Position (kb) 724
725
726 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 723.631 kb on - strand, within Synpcc7942_0728 at 723.631 kb on - strand, within Synpcc7942_0728 at 723.631 kb on - strand, within Synpcc7942_0728 at 723.631 kb on - strand, within Synpcc7942_0728 at 723.666 kb on - strand, within Synpcc7942_0728 at 723.667 kb on + strand, within Synpcc7942_0728 at 723.667 kb on - strand, within Synpcc7942_0728 at 723.673 kb on + strand, within Synpcc7942_0728 at 723.679 kb on + strand, within Synpcc7942_0728 at 723.681 kb on - strand, within Synpcc7942_0728 at 723.681 kb on - strand, within Synpcc7942_0728 at 723.681 kb on - strand, within Synpcc7942_0728 at 723.681 kb on - strand, within Synpcc7942_0728 at 723.681 kb on - strand at 723.687 kb on + strand, within Synpcc7942_0728 at 723.695 kb on - strand, within Synpcc7942_0728 at 723.705 kb on - strand, within Synpcc7942_0728 at 723.722 kb on + strand, within Synpcc7942_0728 at 723.746 kb on + strand at 723.746 kb on + strand at 723.746 kb on + strand at 723.746 kb on + strand at 723.746 kb on + strand at 723.762 kb on + strand at 723.770 kb on - strand at 723.792 kb on + strand at 723.797 kb on + strand at 723.797 kb on + strand at 723.797 kb on + strand at 723.797 kb on + strand at 723.797 kb on + strand at 723.805 kb on - strand at 723.805 kb on - strand at 723.806 kb on + strand at 723.830 kb on + strand at 723.830 kb on + strand at 723.830 kb on + strand at 723.838 kb on - strand at 723.858 kb on - strand at 723.878 kb on + strand, within Synpcc7942_0729 at 723.886 kb on - strand, within Synpcc7942_0729 at 723.914 kb on + strand, within Synpcc7942_0729 at 723.923 kb on - strand, within Synpcc7942_0729 at 723.949 kb on + strand, within Synpcc7942_0729 at 723.949 kb on + strand, within Synpcc7942_0729 at 723.951 kb on - strand, within Synpcc7942_0729 at 723.964 kb on + strand, within Synpcc7942_0729 at 724.005 kb on - strand, within Synpcc7942_0729 at 724.005 kb on - strand, within Synpcc7942_0729 at 724.023 kb on - strand, within Synpcc7942_0729 at 724.047 kb on + strand, within Synpcc7942_0729 at 724.047 kb on - strand, within Synpcc7942_0729 at 724.082 kb on - strand, within Synpcc7942_0729 at 724.082 kb on - strand, within Synpcc7942_0729 at 724.098 kb on - strand, within Synpcc7942_0729 at 724.107 kb on + strand, within Synpcc7942_0729 at 724.115 kb on - strand, within Synpcc7942_0729 at 724.130 kb on + strand, within Synpcc7942_0729 at 724.132 kb on + strand, within Synpcc7942_0729 at 724.138 kb on - strand, within Synpcc7942_0729 at 724.165 kb on + strand, within Synpcc7942_0729 at 724.165 kb on + strand, within Synpcc7942_0729 at 724.187 kb on + strand, within Synpcc7942_0729 at 724.187 kb on + strand, within Synpcc7942_0729 at 724.187 kb on + strand, within Synpcc7942_0729 at 724.187 kb on + strand, within Synpcc7942_0729 at 724.195 kb on - strand, within Synpcc7942_0729 at 724.195 kb on - strand, within Synpcc7942_0729 at 724.195 kb on - strand, within Synpcc7942_0729 at 724.195 kb on - strand, within Synpcc7942_0729 at 724.195 kb on - strand, within Synpcc7942_0729 at 724.198 kb on + strand, within Synpcc7942_0729 at 724.200 kb on + strand, within Synpcc7942_0729 at 724.200 kb on - strand, within Synpcc7942_0729 at 724.232 kb on - strand, within Synpcc7942_0729 at 724.244 kb on + strand, within Synpcc7942_0729 at 724.279 kb on + strand, within Synpcc7942_0729 at 724.336 kb on + strand, within Synpcc7942_0729 at 724.347 kb on + strand, within Synpcc7942_0729 at 724.347 kb on + strand, within Synpcc7942_0729 at 724.357 kb on + strand at 724.357 kb on + strand at 724.362 kb on + strand at 724.365 kb on - strand at 724.405 kb on + strand at 724.413 kb on - strand at 724.413 kb on - strand at 724.470 kb on + strand at 724.470 kb on + strand at 724.470 kb on + strand at 724.470 kb on + strand at 724.471 kb on - strand at 724.478 kb on - strand at 724.479 kb on - strand at 724.518 kb on - strand at 724.537 kb on - strand at 724.650 kb on - strand at 724.676 kb on + strand at 724.676 kb on + strand at 724.681 kb on + strand, within Synpcc7942_0730 at 724.681 kb on + strand, within Synpcc7942_0730 at 724.684 kb on - strand, within Synpcc7942_0730 at 724.684 kb on - strand, within Synpcc7942_0730 at 724.687 kb on - strand, within Synpcc7942_0730 at 724.696 kb on - strand, within Synpcc7942_0730 at 724.734 kb on + strand, within Synpcc7942_0730 at 724.742 kb on - strand, within Synpcc7942_0730 at 724.748 kb on + strand, within Synpcc7942_0730 at 724.748 kb on + strand, within Synpcc7942_0730 at 724.754 kb on - strand, within Synpcc7942_0730 at 724.777 kb on + strand at 724.777 kb on - strand, within Synpcc7942_0730 at 724.782 kb on + strand, within Synpcc7942_0730 at 724.810 kb on - strand, within Synpcc7942_0730 at 724.835 kb on + strand, within Synpcc7942_0730 at 724.852 kb on + strand, within Synpcc7942_0730 at 724.852 kb on + strand, within Synpcc7942_0730 at 724.860 kb on - strand, within Synpcc7942_0730 at 724.860 kb on - strand, within Synpcc7942_0730 at 724.868 kb on + strand, within Synpcc7942_0730 at 724.868 kb on + strand, within Synpcc7942_0730 at 724.868 kb on + strand, within Synpcc7942_0730 at 724.893 kb on - strand, within Synpcc7942_0730 at 724.894 kb on - strand, within Synpcc7942_0730 at 724.913 kb on + strand, within Synpcc7942_0730 at 724.913 kb on + strand, within Synpcc7942_0730 at 724.918 kb on - strand, within Synpcc7942_0730 at 724.921 kb on - strand, within Synpcc7942_0730 at 724.923 kb on - strand, within Synpcc7942_0730 at 724.927 kb on + strand, within Synpcc7942_0730 at 724.956 kb on - strand, within Synpcc7942_0730 at 724.965 kb on + strand, within Synpcc7942_0730 at 724.976 kb on - strand, within Synpcc7942_0730 at 725.004 kb on - strand, within Synpcc7942_0730 at 725.009 kb on - strand, within Synpcc7942_0730 at 725.036 kb on - strand, within Synpcc7942_0730 at 725.087 kb on - strand at 725.100 kb on + strand, within Synpcc7942_0730 at 725.100 kb on + strand, within Synpcc7942_0730 at 725.105 kb on + strand, within Synpcc7942_0730 at 725.113 kb on - strand at 725.146 kb on + strand at 725.157 kb on - strand at 725.167 kb on - strand at 725.192 kb on - strand at 725.273 kb on - strand at 725.297 kb on + strand at 725.351 kb on - strand at 725.443 kb on + strand at 725.455 kb on + strand at 725.455 kb on + strand at 725.455 kb on + strand at 725.455 kb on + strand at 725.455 kb on + strand at 725.463 kb on + strand at 725.463 kb on - strand at 725.463 kb on - strand at 725.463 kb on - strand at 725.465 kb on + strand at 725.465 kb on + strand at 725.471 kb on - strand at 725.471 kb on - strand at 725.473 kb on - strand at 725.473 kb on - strand at 725.522 kb on + strand at 725.522 kb on + strand at 725.524 kb on + strand at 725.524 kb on + strand at 725.532 kb on - strand at 725.569 kb on + strand at 725.604 kb on - strand at 725.645 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.655 kb on + strand at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.663 kb on - strand, within Synpcc7942_0731 at 725.683 kb on - strand, within Synpcc7942_0731 at 725.687 kb on + strand, within Synpcc7942_0731 at 725.715 kb on + strand, within Synpcc7942_0731 at 725.744 kb on - strand, within Synpcc7942_0731 at 725.771 kb on + strand, within Synpcc7942_0731 at 725.799 kb on + strand, within Synpcc7942_0731 at 725.799 kb on + strand, within Synpcc7942_0731 at 725.807 kb on - strand, within Synpcc7942_0731 at 725.824 kb on + strand, within Synpcc7942_0731 at 725.854 kb on + strand, within Synpcc7942_0731 at 725.876 kb on + strand, within Synpcc7942_0731 at 725.882 kb on + strand, within Synpcc7942_0731 at 725.890 kb on - strand, within Synpcc7942_0731 at 725.890 kb on - strand, within Synpcc7942_0731 at 725.901 kb on - strand, within Synpcc7942_0731 at 725.908 kb on + strand, within Synpcc7942_0731 at 725.909 kb on - strand, within Synpcc7942_0731 at 725.916 kb on - strand, within Synpcc7942_0731 at 725.930 kb on + strand, within Synpcc7942_0731 at 725.945 kb on + strand, within Synpcc7942_0731 at 725.953 kb on + strand, within Synpcc7942_0731 at 725.970 kb on + strand, within Synpcc7942_0731 at 726.004 kb on + strand, within Synpcc7942_0731 at 726.017 kb on - strand, within Synpcc7942_0731 at 726.111 kb on - strand, within Synpcc7942_0731 at 726.125 kb on - strand, within Synpcc7942_0731 at 726.161 kb on - strand, within Synpcc7942_0731
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 0.01953125 mM remove 723,631 - Synpcc7942_0728 0.72 -1.9 723,631 - Synpcc7942_0728 0.72 +1.7 723,631 - Synpcc7942_0728 0.72 +1.6 723,631 - Synpcc7942_0728 0.72 -0.0 723,666 - Synpcc7942_0728 0.79 +1.2 723,667 + Synpcc7942_0728 0.79 -1.9 723,667 - Synpcc7942_0728 0.79 +1.9 723,673 + Synpcc7942_0728 0.80 -3.7 723,679 + Synpcc7942_0728 0.81 -0.9 723,681 - Synpcc7942_0728 0.82 +1.5 723,681 - Synpcc7942_0728 0.82 +3.2 723,681 - Synpcc7942_0728 0.82 +2.0 723,681 - Synpcc7942_0728 0.82 -3.5 723,681 - -0.9 723,687 + Synpcc7942_0728 0.83 -0.2 723,695 - Synpcc7942_0728 0.84 +3.9 723,705 - Synpcc7942_0728 0.86 +0.4 723,722 + Synpcc7942_0728 0.89 +0.4 723,746 + +0.7 723,746 + +0.3 723,746 + +0.1 723,746 + -1.9 723,746 + +1.7 723,762 + -1.9 723,770 - +1.4 723,792 + -0.8 723,797 + +1.1 723,797 + -3.2 723,797 + +2.2 723,797 + +0.5 723,797 + -0.9 723,805 - +1.1 723,805 - +1.1 723,806 + +0.9 723,830 + +1.9 723,830 + -0.9 723,830 + +0.7 723,838 - -0.1 723,858 - -2.9 723,878 + Synpcc7942_0729 0.12 +0.7 723,886 - Synpcc7942_0729 0.13 +0.6 723,914 + Synpcc7942_0729 0.18 +1.7 723,923 - Synpcc7942_0729 0.19 +0.9 723,949 + Synpcc7942_0729 0.24 -0.5 723,949 + Synpcc7942_0729 0.24 +2.2 723,951 - Synpcc7942_0729 0.24 +3.0 723,964 + Synpcc7942_0729 0.26 +1.7 724,005 - Synpcc7942_0729 0.33 +0.5 724,005 - Synpcc7942_0729 0.33 +1.5 724,023 - Synpcc7942_0729 0.36 -0.1 724,047 + Synpcc7942_0729 0.40 +1.0 724,047 - Synpcc7942_0729 0.40 +2.5 724,082 - Synpcc7942_0729 0.46 -0.2 724,082 - Synpcc7942_0729 0.46 +3.9 724,098 - Synpcc7942_0729 0.48 +0.9 724,107 + Synpcc7942_0729 0.50 +0.4 724,115 - Synpcc7942_0729 0.51 -3.2 724,130 + Synpcc7942_0729 0.53 +3.6 724,132 + Synpcc7942_0729 0.54 +1.9 724,138 - Synpcc7942_0729 0.55 -0.7 724,165 + Synpcc7942_0729 0.59 +1.9 724,165 + Synpcc7942_0729 0.59 -1.9 724,187 + Synpcc7942_0729 0.63 -1.9 724,187 + Synpcc7942_0729 0.63 -0.9 724,187 + Synpcc7942_0729 0.63 +1.9 724,187 + Synpcc7942_0729 0.63 +1.6 724,195 - Synpcc7942_0729 0.64 +2.4 724,195 - Synpcc7942_0729 0.64 +1.1 724,195 - Synpcc7942_0729 0.64 +1.5 724,195 - Synpcc7942_0729 0.64 +0.1 724,195 - Synpcc7942_0729 0.64 +4.4 724,198 + Synpcc7942_0729 0.65 +2.3 724,200 + Synpcc7942_0729 0.65 +1.7 724,200 - Synpcc7942_0729 0.65 +1.7 724,232 - Synpcc7942_0729 0.70 +1.2 724,244 + Synpcc7942_0729 0.72 +0.2 724,279 + Synpcc7942_0729 0.78 -0.9 724,336 + Synpcc7942_0729 0.87 -3.2 724,347 + Synpcc7942_0729 0.89 -3.5 724,347 + Synpcc7942_0729 0.89 -0.6 724,357 + +2.4 724,357 + +1.3 724,362 + -0.3 724,365 - -0.0 724,405 + +0.7 724,413 - +1.8 724,413 - +1.0 724,470 + +2.6 724,470 + +0.4 724,470 + +0.7 724,470 + +1.5 724,471 - +1.2 724,478 - +1.8 724,479 - +0.8 724,518 - +0.6 724,537 - +0.1 724,650 - +0.4 724,676 + +2.9 724,676 + +0.4 724,681 + Synpcc7942_0730 0.10 +1.5 724,681 + Synpcc7942_0730 0.10 -3.0 724,684 - Synpcc7942_0730 0.11 +1.7 724,684 - Synpcc7942_0730 0.11 +3.0 724,687 - Synpcc7942_0730 0.11 +1.2 724,696 - Synpcc7942_0730 0.13 +2.5 724,734 + Synpcc7942_0730 0.20 +1.6 724,742 - Synpcc7942_0730 0.21 +4.4 724,748 + Synpcc7942_0730 0.23 +0.1 724,748 + Synpcc7942_0730 0.23 +3.3 724,754 - Synpcc7942_0730 0.24 +0.8 724,777 + +0.1 724,777 - Synpcc7942_0730 0.28 +2.1 724,782 + Synpcc7942_0730 0.29 +1.3 724,810 - Synpcc7942_0730 0.34 -2.5 724,835 + Synpcc7942_0730 0.39 -1.9 724,852 + Synpcc7942_0730 0.42 +1.0 724,852 + Synpcc7942_0730 0.42 -2.5 724,860 - Synpcc7942_0730 0.43 -1.5 724,860 - Synpcc7942_0730 0.43 +0.8 724,868 + Synpcc7942_0730 0.45 +1.9 724,868 + Synpcc7942_0730 0.45 +0.4 724,868 + Synpcc7942_0730 0.45 +0.7 724,893 - Synpcc7942_0730 0.49 -0.5 724,894 - Synpcc7942_0730 0.50 +3.4 724,913 + Synpcc7942_0730 0.53 +1.6 724,913 + Synpcc7942_0730 0.53 +5.2 724,918 - Synpcc7942_0730 0.54 -0.9 724,921 - Synpcc7942_0730 0.55 +1.9 724,923 - Synpcc7942_0730 0.55 +0.1 724,927 + Synpcc7942_0730 0.56 +2.3 724,956 - Synpcc7942_0730 0.61 +0.8 724,965 + Synpcc7942_0730 0.63 +1.7 724,976 - Synpcc7942_0730 0.65 +2.2 725,004 - Synpcc7942_0730 0.70 +3.7 725,009 - Synpcc7942_0730 0.71 +1.3 725,036 - Synpcc7942_0730 0.76 +1.4 725,087 - -0.9 725,100 + Synpcc7942_0730 0.88 +0.4 725,100 + Synpcc7942_0730 0.88 -0.2 725,105 + Synpcc7942_0730 0.89 +0.4 725,113 - +0.4 725,146 + +1.1 725,157 - +0.8 725,167 - +3.0 725,192 - -0.6 725,273 - -0.3 725,297 + +1.9 725,351 - -0.2 725,443 + +0.3 725,455 + -1.9 725,455 + +2.1 725,455 + +0.3 725,455 + +1.8 725,455 + -0.7 725,463 + +1.4 725,463 - -0.9 725,463 - +2.3 725,463 - +0.5 725,465 + -0.9 725,465 + -0.9 725,471 - +0.9 725,471 - +2.4 725,473 - +1.4 725,473 - +2.7 725,522 + +0.6 725,522 + +2.3 725,524 + +3.3 725,524 + +1.3 725,532 - +2.0 725,569 + +1.3 725,604 - -1.5 725,645 + -2.5 725,655 + +1.1 725,655 + +3.0 725,655 + +1.5 725,655 + +0.1 725,655 + +0.1 725,655 + +1.3 725,655 + -0.9 725,655 + +0.7 725,655 + +1.9 725,655 + +0.3 725,655 + -0.5 725,655 + +2.2 725,655 + +2.2 725,655 + -0.9 725,655 + +2.0 725,655 + +1.6 725,655 + -1.3 725,663 - Synpcc7942_0731 0.10 +2.5 725,663 - Synpcc7942_0731 0.10 +0.4 725,663 - Synpcc7942_0731 0.10 +1.6 725,663 - Synpcc7942_0731 0.10 -1.6 725,663 - Synpcc7942_0731 0.10 +2.1 725,663 - Synpcc7942_0731 0.10 +2.6 725,663 - Synpcc7942_0731 0.10 +0.8 725,663 - Synpcc7942_0731 0.10 -1.5 725,663 - Synpcc7942_0731 0.10 +2.0 725,663 - Synpcc7942_0731 0.10 +3.8 725,663 - Synpcc7942_0731 0.10 +2.1 725,663 - Synpcc7942_0731 0.10 -0.5 725,683 - Synpcc7942_0731 0.11 -0.9 725,687 + Synpcc7942_0731 0.11 +2.5 725,715 + Synpcc7942_0731 0.13 -0.6 725,744 - Synpcc7942_0731 0.14 +1.7 725,771 + Synpcc7942_0731 0.16 -0.2 725,799 + Synpcc7942_0731 0.17 +2.1 725,799 + Synpcc7942_0731 0.17 -1.9 725,807 - Synpcc7942_0731 0.18 -0.3 725,824 + Synpcc7942_0731 0.19 +0.1 725,854 + Synpcc7942_0731 0.20 +2.7 725,876 + Synpcc7942_0731 0.21 +1.5 725,882 + Synpcc7942_0731 0.22 +2.9 725,890 - Synpcc7942_0731 0.22 -0.5 725,890 - Synpcc7942_0731 0.22 +1.0 725,901 - Synpcc7942_0731 0.23 +1.2 725,908 + Synpcc7942_0731 0.23 +4.3 725,909 - Synpcc7942_0731 0.23 +0.3 725,916 - Synpcc7942_0731 0.23 -1.9 725,930 + Synpcc7942_0731 0.24 -0.2 725,945 + Synpcc7942_0731 0.25 +2.3 725,953 + Synpcc7942_0731 0.25 +2.9 725,970 + Synpcc7942_0731 0.26 -0.2 726,004 + Synpcc7942_0731 0.28 -3.7 726,017 - Synpcc7942_0731 0.29 +2.4 726,111 - Synpcc7942_0731 0.34 -0.3 726,125 - Synpcc7942_0731 0.35 +5.0 726,161 - Synpcc7942_0731 0.37 +0.5
Or see this region's nucleotide sequence