Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21319 and SM_b21320 overlap by 14 nucleotides SM_b21320 and SM_b21321 are separated by 34 nucleotides
SM_b21319: SM_b21319 - hypothetical protein, at 986,060 to 987,532
_b21319
SM_b21320: SM_b21320 - bifunctional glycosyltransferase, at 987,519 to 990,200
_b21320
SM_b21321: SM_b21321 - hypothetical protein, at 990,235 to 991,413
_b21321
Position (kb) 987
988
989
990
991 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 986.608 kb on + strand, within SM_b21319 at 986.609 kb on - strand, within SM_b21319 at 986.609 kb on - strand, within SM_b21319 at 986.687 kb on + strand, within SM_b21319 at 986.687 kb on + strand, within SM_b21319 at 986.687 kb on + strand, within SM_b21319 at 986.688 kb on - strand, within SM_b21319 at 986.729 kb on + strand, within SM_b21319 at 986.836 kb on - strand, within SM_b21319 at 987.451 kb on + strand at 987.451 kb on + strand at 987.495 kb on + strand at 987.495 kb on + strand at 987.496 kb on - strand at 987.496 kb on - strand at 987.702 kb on + strand at 987.703 kb on - strand at 987.783 kb on + strand at 987.783 kb on + strand at 987.870 kb on + strand, within SM_b21320 at 987.871 kb on - strand at 987.906 kb on + strand, within SM_b21320 at 987.906 kb on + strand, within SM_b21320 at 987.907 kb on - strand, within SM_b21320 at 987.907 kb on - strand, within SM_b21320 at 987.907 kb on - strand, within SM_b21320 at 987.909 kb on - strand, within SM_b21320 at 987.914 kb on + strand, within SM_b21320 at 987.914 kb on + strand, within SM_b21320 at 987.960 kb on + strand, within SM_b21320 at 987.992 kb on + strand, within SM_b21320 at 987.992 kb on + strand, within SM_b21320 at 987.992 kb on + strand, within SM_b21320 at 988.664 kb on + strand, within SM_b21320 at 988.665 kb on - strand, within SM_b21320 at 988.665 kb on - strand, within SM_b21320 at 989.020 kb on + strand, within SM_b21320 at 989.020 kb on + strand, within SM_b21320 at 989.020 kb on + strand, within SM_b21320 at 989.020 kb on + strand, within SM_b21320 at 989.021 kb on - strand, within SM_b21320 at 989.021 kb on - strand, within SM_b21320 at 989.021 kb on - strand, within SM_b21320 at 989.022 kb on + strand, within SM_b21320 at 989.023 kb on - strand, within SM_b21320 at 989.055 kb on + strand, within SM_b21320 at 989.128 kb on - strand, within SM_b21320 at 989.129 kb on + strand, within SM_b21320 at 989.130 kb on - strand, within SM_b21320 at 989.305 kb on + strand, within SM_b21320 at 989.335 kb on - strand, within SM_b21320 at 989.354 kb on + strand, within SM_b21320 at 989.354 kb on + strand, within SM_b21320 at 989.355 kb on - strand, within SM_b21320 at 989.355 kb on - strand, within SM_b21320 at 989.355 kb on - strand, within SM_b21320 at 989.355 kb on - strand, within SM_b21320 at 989.412 kb on + strand, within SM_b21320 at 989.412 kb on + strand, within SM_b21320 at 989.412 kb on + strand, within SM_b21320 at 989.413 kb on - strand, within SM_b21320 at 989.413 kb on - strand, within SM_b21320 at 989.413 kb on - strand, within SM_b21320 at 989.451 kb on + strand, within SM_b21320 at 989.452 kb on - strand, within SM_b21320 at 989.592 kb on + strand, within SM_b21320 at 989.592 kb on + strand, within SM_b21320 at 989.592 kb on + strand, within SM_b21320 at 989.593 kb on - strand, within SM_b21320 at 989.593 kb on - strand, within SM_b21320 at 989.593 kb on - strand, within SM_b21320 at 989.594 kb on + strand, within SM_b21320 at 989.595 kb on - strand, within SM_b21320 at 989.595 kb on - strand, within SM_b21320 at 989.595 kb on - strand, within SM_b21320 at 989.595 kb on - strand, within SM_b21320 at 989.595 kb on - strand, within SM_b21320 at 990.274 kb on + strand at 990.275 kb on - strand at 990.316 kb on + strand at 990.376 kb on - strand, within SM_b21321 at 990.465 kb on + strand at 990.466 kb on - strand, within SM_b21321 at 990.466 kb on - strand, within SM_b21321 at 990.706 kb on + strand, within SM_b21321 at 990.763 kb on + strand, within SM_b21321 at 991.012 kb on + strand, within SM_b21321 at 991.013 kb on - strand, within SM_b21321 at 991.051 kb on + strand, within SM_b21321
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 986,608 + SM_b21319 0.37 -0.6 986,609 - SM_b21319 0.37 -0.4 986,609 - SM_b21319 0.37 +0.3 986,687 + SM_b21319 0.43 +0.4 986,687 + SM_b21319 0.43 -0.3 986,687 + SM_b21319 0.43 -1.2 986,688 - SM_b21319 0.43 -0.1 986,729 + SM_b21319 0.45 +0.3 986,836 - SM_b21319 0.53 +1.7 987,451 + -0.9 987,451 + -0.1 987,495 + -0.7 987,495 + +0.6 987,496 - -0.9 987,496 - +1.6 987,702 + -0.3 987,703 - -0.9 987,783 + -2.8 987,783 + +1.7 987,870 + SM_b21320 0.13 +0.6 987,871 - +3.1 987,906 + SM_b21320 0.14 +2.3 987,906 + SM_b21320 0.14 +1.0 987,907 - SM_b21320 0.14 -0.7 987,907 - SM_b21320 0.14 +0.8 987,907 - SM_b21320 0.14 +0.3 987,909 - SM_b21320 0.15 +1.3 987,914 + SM_b21320 0.15 +0.1 987,914 + SM_b21320 0.15 +0.4 987,960 + SM_b21320 0.16 -0.2 987,992 + SM_b21320 0.18 -0.7 987,992 + SM_b21320 0.18 -1.2 987,992 + SM_b21320 0.18 +0.2 988,664 + SM_b21320 0.43 -0.3 988,665 - SM_b21320 0.43 +1.4 988,665 - SM_b21320 0.43 -0.5 989,020 + SM_b21320 0.56 +0.9 989,020 + SM_b21320 0.56 -0.3 989,020 + SM_b21320 0.56 -0.5 989,020 + SM_b21320 0.56 +0.1 989,021 - SM_b21320 0.56 +0.7 989,021 - SM_b21320 0.56 -2.3 989,021 - SM_b21320 0.56 -0.4 989,022 + SM_b21320 0.56 +0.2 989,023 - SM_b21320 0.56 +0.5 989,055 + SM_b21320 0.57 +2.1 989,128 - SM_b21320 0.60 -0.5 989,129 + SM_b21320 0.60 +1.6 989,130 - SM_b21320 0.60 -0.9 989,305 + SM_b21320 0.67 +1.7 989,335 - SM_b21320 0.68 +1.1 989,354 + SM_b21320 0.68 -0.5 989,354 + SM_b21320 0.68 -0.1 989,355 - SM_b21320 0.68 -0.5 989,355 - SM_b21320 0.68 +0.6 989,355 - SM_b21320 0.68 -0.9 989,355 - SM_b21320 0.68 +0.3 989,412 + SM_b21320 0.71 +2.5 989,412 + SM_b21320 0.71 +1.7 989,412 + SM_b21320 0.71 +1.5 989,413 - SM_b21320 0.71 +0.1 989,413 - SM_b21320 0.71 +0.3 989,413 - SM_b21320 0.71 +0.9 989,451 + SM_b21320 0.72 -0.5 989,452 - SM_b21320 0.72 -1.0 989,592 + SM_b21320 0.77 +1.2 989,592 + SM_b21320 0.77 -0.2 989,592 + SM_b21320 0.77 -0.6 989,593 - SM_b21320 0.77 -0.1 989,593 - SM_b21320 0.77 +0.4 989,593 - SM_b21320 0.77 -2.8 989,594 + SM_b21320 0.77 +0.1 989,595 - SM_b21320 0.77 +0.2 989,595 - SM_b21320 0.77 +0.6 989,595 - SM_b21320 0.77 -1.2 989,595 - SM_b21320 0.77 +1.0 989,595 - SM_b21320 0.77 +0.3 990,274 + -0.8 990,275 - +2.5 990,316 + -0.7 990,376 - SM_b21321 0.12 -0.2 990,465 + +1.5 990,466 - SM_b21321 0.20 -1.7 990,466 - SM_b21321 0.20 +1.7 990,706 + SM_b21321 0.40 +0.3 990,763 + SM_b21321 0.45 +0.2 991,012 + SM_b21321 0.66 -1.1 991,013 - SM_b21321 0.66 +0.2 991,051 + SM_b21321 0.69 +0.8
Or see this region's nucleotide sequence