Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21186 and SM_b21187 are separated by 212 nucleotides SM_b21187 and SM_b21188 are separated by 343 nucleotides
SM_b21186: SM_b21186 - 4-aminobutyrate aminotransferase, at 935,353 to 936,621
_b21186
SM_b21187: SM_b21187 - LacI family transcriptional regulator, at 936,834 to 937,664
_b21187
SM_b21188: SM_b21188 - acyltransferase, at 938,008 to 939,141
_b21188
Position (kb) 936
937
938 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 935.987 kb on + strand, within SM_b21186 at 936.168 kb on - strand, within SM_b21186 at 936.168 kb on - strand, within SM_b21186 at 936.168 kb on - strand, within SM_b21186 at 936.375 kb on - strand, within SM_b21186 at 936.375 kb on - strand, within SM_b21186 at 936.405 kb on + strand, within SM_b21186 at 936.405 kb on + strand, within SM_b21186 at 936.468 kb on + strand, within SM_b21186 at 936.468 kb on + strand, within SM_b21186 at 936.468 kb on + strand, within SM_b21186 at 936.469 kb on - strand, within SM_b21186 at 936.503 kb on + strand at 936.504 kb on - strand at 936.504 kb on - strand at 936.647 kb on + strand at 936.685 kb on + strand at 936.779 kb on - strand at 936.783 kb on - strand at 936.962 kb on + strand, within SM_b21187 at 936.963 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.970 kb on - strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.971 kb on + strand, within SM_b21187 at 936.972 kb on - strand, within SM_b21187 at 937.548 kb on + strand, within SM_b21187 at 937.548 kb on + strand, within SM_b21187 at 937.646 kb on + strand at 937.767 kb on - strand at 937.789 kb on + strand at 937.789 kb on + strand at 937.790 kb on - strand at 937.834 kb on + strand at 937.834 kb on + strand at 937.835 kb on - strand at 937.835 kb on - strand at 937.897 kb on + strand at 937.898 kb on - strand at 938.072 kb on - strand at 938.072 kb on - strand at 938.216 kb on - strand, within SM_b21188 at 938.221 kb on + strand, within SM_b21188 at 938.222 kb on - strand, within SM_b21188 at 938.254 kb on + strand, within SM_b21188 at 938.254 kb on + strand, within SM_b21188 at 938.329 kb on + strand, within SM_b21188 at 938.329 kb on + strand, within SM_b21188 at 938.329 kb on + strand, within SM_b21188 at 938.347 kb on + strand, within SM_b21188 at 938.388 kb on + strand, within SM_b21188 at 938.388 kb on + strand, within SM_b21188 at 938.419 kb on + strand, within SM_b21188 at 938.419 kb on + strand at 938.420 kb on - strand, within SM_b21188 at 938.516 kb on - strand, within SM_b21188
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 935,987 + SM_b21186 0.50 +0.2 936,168 - SM_b21186 0.64 -3.8 936,168 - SM_b21186 0.64 -0.6 936,168 - SM_b21186 0.64 -1.0 936,375 - SM_b21186 0.81 -0.5 936,375 - SM_b21186 0.81 +0.2 936,405 + SM_b21186 0.83 +1.3 936,405 + SM_b21186 0.83 +0.8 936,468 + SM_b21186 0.88 -1.8 936,468 + SM_b21186 0.88 +0.4 936,468 + SM_b21186 0.88 +1.3 936,469 - SM_b21186 0.88 +0.7 936,503 + -0.0 936,504 - -0.2 936,504 - +0.4 936,647 + -0.5 936,685 + -0.1 936,779 - +0.1 936,783 - -0.7 936,962 + SM_b21187 0.15 +0.3 936,963 - SM_b21187 0.16 -0.4 936,970 - SM_b21187 0.16 -0.5 936,970 - SM_b21187 0.16 +0.1 936,970 - SM_b21187 0.16 -1.1 936,970 - SM_b21187 0.16 -0.5 936,970 - SM_b21187 0.16 -0.6 936,971 + SM_b21187 0.16 -0.2 936,971 + SM_b21187 0.16 -0.7 936,971 + SM_b21187 0.16 -0.8 936,971 + SM_b21187 0.16 -0.1 936,971 + SM_b21187 0.16 -3.6 936,972 - SM_b21187 0.17 -0.9 937,548 + SM_b21187 0.86 -0.7 937,548 + SM_b21187 0.86 -1.2 937,646 + +0.2 937,767 - -0.3 937,789 + +1.8 937,789 + -0.3 937,790 - +0.3 937,834 + +0.3 937,834 + +0.1 937,835 - +2.7 937,835 - +0.5 937,897 + -0.9 937,898 - -0.5 938,072 - -1.2 938,072 - -0.4 938,216 - SM_b21188 0.18 +0.9 938,221 + SM_b21188 0.19 +0.1 938,222 - SM_b21188 0.19 +1.3 938,254 + SM_b21188 0.22 -0.2 938,254 + SM_b21188 0.22 -0.3 938,329 + SM_b21188 0.28 +0.2 938,329 + SM_b21188 0.28 -0.1 938,329 + SM_b21188 0.28 +1.7 938,347 + SM_b21188 0.30 -1.0 938,388 + SM_b21188 0.34 -0.4 938,388 + SM_b21188 0.34 -0.9 938,419 + SM_b21188 0.36 +0.4 938,419 + +1.5 938,420 - SM_b21188 0.36 +0.7 938,516 - SM_b21188 0.45 -0.6
Or see this region's nucleotide sequence