Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_962

Experiment: 5-Hydroxymethylfurfural 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 2.5 mM
1,091,252	+		Pf1N1B4_961	0.23	+2.5
1,091,252	+		Pf1N1B4_961	0.23	+0.2
1,091,252	+		Pf1N1B4_961	0.23	-1.1
1,091,253	-		Pf1N1B4_961	0.23	+1.2
1,091,292	+		Pf1N1B4_961	0.27	-0.5
1,091,292	+		Pf1N1B4_961	0.27	-2.3
1,091,293	-		Pf1N1B4_961	0.27	-0.7
1,091,293	-		Pf1N1B4_961	0.27	+0.4
1,091,293	-		Pf1N1B4_961	0.27	+1.5
1,091,307	+		Pf1N1B4_961	0.28	-1.4
1,091,307	+		Pf1N1B4_961	0.28	+1.1
1,091,308	-		Pf1N1B4_961	0.28	+0.1
1,091,308	-		Pf1N1B4_961	0.28	-0.3
1,091,308	-		Pf1N1B4_961	0.28	-1.4
1,091,308	-		Pf1N1B4_961	0.28	-1.7
1,091,308	-		Pf1N1B4_961	0.28	-1.1
1,091,379	+		Pf1N1B4_961	0.34	-0.7
1,091,379	+		Pf1N1B4_961	0.34	-0.9
1,091,379	+		Pf1N1B4_961	0.34	-1.1
1,091,380	-		Pf1N1B4_961	0.34	+0.1
1,091,380	-		Pf1N1B4_961	0.34	-0.6
1,091,380	-				+0.9
1,091,380	-		Pf1N1B4_961	0.34	+0.6
1,091,463	+		Pf1N1B4_961	0.41	-2.3
1,091,463	+		Pf1N1B4_961	0.41	+0.3
1,091,463	+		Pf1N1B4_961	0.41	-1.0
1,091,463	+		Pf1N1B4_961	0.41	-0.8
1,091,463	+		Pf1N1B4_961	0.41	+0.2
1,091,463	+		Pf1N1B4_961	0.41	-0.4
1,091,463	+		Pf1N1B4_961	0.41	+0.9
1,091,463	+		Pf1N1B4_961	0.41	-0.1
1,091,463	+		Pf1N1B4_961	0.41	+0.9
1,091,463	+		Pf1N1B4_961	0.41	-0.3
1,091,463	+		Pf1N1B4_961	0.41	+0.3
1,091,463	+		Pf1N1B4_961	0.41	+0.3
1,091,463	+		Pf1N1B4_961	0.41	+0.9
1,091,463	+		Pf1N1B4_961	0.41	-0.8
1,091,463	+		Pf1N1B4_961	0.41	-0.1
1,091,463	+		Pf1N1B4_961	0.41	+0.7
1,091,463	+		Pf1N1B4_961	0.41	-1.7
1,091,463	+				-0.1
1,091,464	-		Pf1N1B4_961	0.41	-1.4
1,091,464	-				-1.9
1,091,464	-		Pf1N1B4_961	0.41	+0.9
1,091,464	-		Pf1N1B4_961	0.41	-1.4
1,091,464	-		Pf1N1B4_961	0.41	+1.6
1,091,464	-		Pf1N1B4_961	0.41	+0.9
1,091,464	-		Pf1N1B4_961	0.41	+0.7
1,091,464	-		Pf1N1B4_961	0.41	-0.3
1,091,464	-		Pf1N1B4_961	0.41	-0.4
1,091,464	-		Pf1N1B4_961	0.41	-0.9
1,091,464	-		Pf1N1B4_961	0.41	-1.4
1,091,464	-		Pf1N1B4_961	0.41	+0.6
1,091,464	-		Pf1N1B4_961	0.41	+0.5
1,091,467	-		Pf1N1B4_961	0.41	-0.3
1,091,495	+		Pf1N1B4_961	0.43	+0.9
1,091,495	+		Pf1N1B4_961	0.43	+0.9
1,091,496	-		Pf1N1B4_961	0.43	-0.7
1,091,497	+		Pf1N1B4_961	0.43	-0.3
1,091,497	+		Pf1N1B4_961	0.43	+2.2
1,091,572	+		Pf1N1B4_961	0.50	-0.5
1,091,572	+		Pf1N1B4_961	0.50	+1.5
1,091,572	+		Pf1N1B4_961	0.50	-1.1
1,091,572	+		Pf1N1B4_961	0.50	-0.5
1,091,572	+		Pf1N1B4_961	0.50	-0.7
1,091,572	+		Pf1N1B4_961	0.50	-0.9
1,091,572	+		Pf1N1B4_961	0.50	+0.5
1,091,572	+		Pf1N1B4_961	0.50	+0.2
1,091,572	+		Pf1N1B4_961	0.50	+0.5
1,091,572	+		Pf1N1B4_961	0.50	-0.1
1,091,572	+		Pf1N1B4_961	0.50	-1.3
1,091,572	+		Pf1N1B4_961	0.50	+0.3
1,091,572	+		Pf1N1B4_961	0.50	+0.9
1,091,573	-		Pf1N1B4_961	0.50	+1.9
1,091,573	-		Pf1N1B4_961	0.50	-1.7
1,091,573	-		Pf1N1B4_961	0.50	+0.8
1,091,573	-		Pf1N1B4_961	0.50	-2.8
1,091,573	-		Pf1N1B4_961	0.50	+1.4
1,091,573	-		Pf1N1B4_961	0.50	+0.5
1,091,573	-		Pf1N1B4_961	0.50	-1.0
1,091,645	-		Pf1N1B4_961	0.56	+0.9
1,091,647	+		Pf1N1B4_961	0.56	+0.6
1,091,661	+		Pf1N1B4_961	0.57	-0.7
1,091,661	+		Pf1N1B4_961	0.57	+2.5
1,091,661	+		Pf1N1B4_961	0.57	+0.3
1,091,661	+		Pf1N1B4_961	0.57	-1.1
1,091,661	+		Pf1N1B4_961	0.57	+0.2
1,091,661	+		Pf1N1B4_961	0.57	-0.5
1,091,662	-		Pf1N1B4_961	0.57	-1.1
1,091,746	-		Pf1N1B4_961	0.64	-0.3
1,091,746	-		Pf1N1B4_961	0.64	+1.3
1,091,773	-		Pf1N1B4_961	0.66	+0.3
1,091,773	-		Pf1N1B4_961	0.66	-0.1
1,091,805	+		Pf1N1B4_961	0.69	-0.4
1,091,805	+		Pf1N1B4_961	0.69	+0.6
1,091,805	+		Pf1N1B4_961	0.69	-0.9
1,091,805	+		Pf1N1B4_961	0.69	-2.2
1,091,805	+		Pf1N1B4_961	0.69	-2.8
1,091,805	+		Pf1N1B4_961	0.69	+0.3
1,091,805	+		Pf1N1B4_961	0.69	-1.2
1,091,805	+		Pf1N1B4_961	0.69	-1.7
1,091,805	+		Pf1N1B4_961	0.69	+0.6
1,091,805	+		Pf1N1B4_961	0.69	-0.1
1,091,805	+		Pf1N1B4_961	0.69	+0.4
1,091,805	+		Pf1N1B4_961	0.69	-0.4
1,091,805	+		Pf1N1B4_961	0.69	-0.5
1,091,805	+		Pf1N1B4_961	0.69	-0.3
1,091,805	+		Pf1N1B4_961	0.69	-1.5
1,091,805	+		Pf1N1B4_961	0.69	-1.2
1,091,805	+		Pf1N1B4_961	0.69	-0.1
1,091,806	-		Pf1N1B4_961	0.69	+1.9
1,091,806	-		Pf1N1B4_961	0.69	-1.9
1,091,806	-		Pf1N1B4_961	0.69	-0.7
1,091,806	-		Pf1N1B4_961	0.69	-1.9
1,091,806	-		Pf1N1B4_961	0.69	-0.1
1,091,806	-		Pf1N1B4_961	0.69	+0.4
1,091,806	-		Pf1N1B4_961	0.69	-1.1
1,091,806	-		Pf1N1B4_961	0.69	+0.2
1,091,806	-		Pf1N1B4_961	0.69	-0.7
1,091,806	-		Pf1N1B4_961	0.69	-1.0
1,091,806	-		Pf1N1B4_961	0.69	-1.2
1,091,850	+		Pf1N1B4_961	0.73	+0.9
1,091,851	-		Pf1N1B4_961	0.73	-0.7
1,091,859	+				-0.1
1,091,859	+		Pf1N1B4_961	0.73	-1.4
1,091,860	-		Pf1N1B4_961	0.73	-0.4
1,091,860	-		Pf1N1B4_961	0.73	-0.1
1,091,860	-		Pf1N1B4_961	0.73	-1.7
1,091,886	+		Pf1N1B4_961	0.76	-2.3
1,091,886	+		Pf1N1B4_961	0.76	-1.1
1,091,886	+		Pf1N1B4_961	0.76	-1.7
1,091,886	+		Pf1N1B4_961	0.76	-0.7
1,091,886	+		Pf1N1B4_961	0.76	-1.0
1,091,886	+		Pf1N1B4_961	0.76	-0.1
1,091,886	+		Pf1N1B4_961	0.76	+0.9
1,091,886	+		Pf1N1B4_961	0.76	-0.1
1,091,886	+		Pf1N1B4_961	0.76	+0.5
1,091,886	+		Pf1N1B4_961	0.76	-0.3
1,091,886	+		Pf1N1B4_961	0.76	+0.2
1,091,886	+		Pf1N1B4_961	0.76	-2.1
1,091,886	+		Pf1N1B4_961	0.76	-0.3
1,091,886	+		Pf1N1B4_961	0.76	+0.9
1,091,886	+		Pf1N1B4_961	0.76	-1.1
1,091,886	+		Pf1N1B4_961	0.76	+0.3
1,091,887	-		Pf1N1B4_961	0.76	-0.4
1,091,887	-		Pf1N1B4_961	0.76	-1.1
1,091,887	-		Pf1N1B4_961	0.76	+0.2
1,091,887	-		Pf1N1B4_961	0.76	+1.6
1,091,887	-		Pf1N1B4_961	0.76	-0.1
1,091,887	-		Pf1N1B4_961	0.76	+0.1
1,091,887	-		Pf1N1B4_961	0.76	-0.5
1,091,946	+		Pf1N1B4_961	0.81	+0.1
1,091,946	+		Pf1N1B4_961	0.81	-0.7
1,091,967	+		Pf1N1B4_961	0.82	-1.1
1,091,967	+		Pf1N1B4_961	0.82	-1.0
1,091,967	+		Pf1N1B4_961	0.82	-0.9
1,091,967	+		Pf1N1B4_961	0.82	-2.1
1,091,967	+		Pf1N1B4_961	0.82	-0.1
1,091,967	+		Pf1N1B4_961	0.82	-1.4
1,091,967	+		Pf1N1B4_961	0.82	-1.9
1,091,967	+		Pf1N1B4_961	0.82	-2.9
1,091,967	+		Pf1N1B4_961	0.82	-0.4
1,091,967	+		Pf1N1B4_961	0.82	-0.1
1,091,967	+		Pf1N1B4_961	0.82	-0.4
1,091,967	+		Pf1N1B4_961	0.82	-0.8
1,091,967	+		Pf1N1B4_961	0.82	+0.9
1,091,967	+		Pf1N1B4_961	0.82	-1.7
1,091,967	+		Pf1N1B4_961	0.82	-0.1
1,091,967	+		Pf1N1B4_961	0.82	-1.1
1,091,967	+		Pf1N1B4_961	0.82	-0.9
1,091,967	+		Pf1N1B4_961	0.82	+0.9
1,091,968	-		Pf1N1B4_961	0.82	+0.9
1,091,968	-		Pf1N1B4_961	0.82	+0.4
1,091,968	-		Pf1N1B4_961	0.82	+1.1
1,091,968	-		Pf1N1B4_961	0.82	+1.2
1,091,968	-		Pf1N1B4_961	0.82	-2.5
1,091,968	-		Pf1N1B4_961	0.82	-0.7
1,091,968	-		Pf1N1B4_961	0.82	-0.4
1,091,968	-		Pf1N1B4_961	0.82	-0.7
1,091,968	-		Pf1N1B4_961	0.82	-2.5
1,091,968	-		Pf1N1B4_961	0.82	-0.3
1,091,968	-		Pf1N1B4_961	0.82	+0.7
1,091,968	-		Pf1N1B4_961	0.82	+1.5
1,091,968	-		Pf1N1B4_961	0.82	-0.3
1,091,968	-		Pf1N1B4_961	0.82	-1.1
1,091,968	-		Pf1N1B4_961	0.82	+0.2
1,092,006	+		Pf1N1B4_961	0.85	+0.3
1,092,006	+		Pf1N1B4_961	0.85	-2.3
1,092,006	+		Pf1N1B4_961	0.85	-1.9
1,092,006	+		Pf1N1B4_961	0.85	-0.7
1,092,006	+		Pf1N1B4_961	0.85	+0.7
1,092,006	+		Pf1N1B4_961	0.85	+0.4
1,092,006	+		Pf1N1B4_961	0.85	+0.7
1,092,006	+		Pf1N1B4_961	0.85	-1.8
1,092,007	-		Pf1N1B4_961	0.86	+1.5
1,092,007	-		Pf1N1B4_961	0.86	-1.1
1,092,007	-		Pf1N1B4_961	0.86	-0.5
1,092,007	-		Pf1N1B4_961	0.86	-0.4
1,092,007	-		Pf1N1B4_961	0.86	-0.4
1,092,007	-		Pf1N1B4_961	0.86	-0.8
1,092,007	-		Pf1N1B4_961	0.86	-1.4
1,092,007	-		Pf1N1B4_961	0.86	-1.1
1,092,078	+				-1.7
1,092,078	+				-0.7
1,092,078	+				+0.5
1,092,079	-				-2.3
1,092,079	-				-1.1
1,092,079	-				+0.2
1,092,079	-				-0.1
1,092,079	-				-0.4
1,092,079	-				-1.1
1,092,079	-				+0.7
1,092,079	-				-1.0
1,092,079	-				-1.1
1,092,079	-				-0.1
1,092,105	+				-1.1
1,092,105	+				-1.8
1,092,105	+				+0.3
1,092,105	+				+1.2
1,092,106	-				-1.4
1,092,106	-				-0.7
1,092,106	-				+1.9
1,092,106	-				+0.3
1,092,106	-				-0.9
1,092,108	+				-1.4
1,092,108	+				-2.4
1,092,108	+				+0.3
1,092,108	+				-0.1
1,092,108	+				+1.4
1,092,108	+				-1.1
1,092,108	+				-0.9
1,092,108	+				+0.9
1,092,108	+				-0.9
1,092,108	+				-1.2
1,092,108	+				+0.3
1,092,108	+				-1.6
1,092,108	+				-0.7
1,092,108	+				-0.9
1,092,108	+				-1.8
1,092,108	+				-0.3
1,092,108	+				+0.9
1,092,108	+				-1.7
1,092,109	-				-0.5
1,092,109	-				-2.1
1,092,109	-				+0.6
1,092,109	-				-1.1
1,092,109	-				-0.9
1,092,109	-				-2.1
1,092,109	-				-0.9
1,092,109	-				-0.3
1,092,109	-				-0.1
1,092,109	-				+0.5
1,092,109	-				-0.4
1,092,109	-				-0.7
1,092,109	-				-1.0
1,092,109	-				-0.1
1,092,109	-				-0.5
1,092,109	-				-1.9
1,092,230	+				-1.0
1,092,230	+				-1.1
1,092,230	+				-0.8
1,092,230	+				-1.7
1,092,230	+				-0.7
1,092,230	+				-0.5
1,092,231	-				-1.7
1,092,231	-				-0.6
1,092,231	-				-1.1
1,092,231	-				+1.2
1,092,231	-				-0.1
1,092,231	-				-1.8
1,092,278	+		Pf1N1B4_962	0.16	-0.5
1,092,278	+		Pf1N1B4_962	0.16	-2.0
1,092,278	+		Pf1N1B4_962	0.16	-1.9
1,092,278	+		Pf1N1B4_962	0.16	-0.7
1,092,279	-		Pf1N1B4_962	0.16	+0.1
1,092,279	-		Pf1N1B4_962	0.16	-0.7
1,092,279	-		Pf1N1B4_962	0.16	+0.9
1,092,279	-		Pf1N1B4_962	0.16	-0.7
1,092,279	-		Pf1N1B4_962	0.16	-0.4
1,092,279	-		Pf1N1B4_962	0.16	-1.4
1,092,300	-		Pf1N1B4_962	0.20	-1.7
1,092,300	-		Pf1N1B4_962	0.20	+0.1
1,092,300	-		Pf1N1B4_962	0.20	+0.5
1,092,326	+		Pf1N1B4_962	0.24	-1.7
1,092,326	+		Pf1N1B4_962	0.24	+0.0
1,092,326	+		Pf1N1B4_962	0.24	-0.7
1,092,326	+		Pf1N1B4_962	0.24	-0.5
1,092,326	+		Pf1N1B4_962	0.24	-0.5
1,092,327	-		Pf1N1B4_962	0.25	-0.1
1,092,327	-		Pf1N1B4_962	0.25	-0.4
1,092,327	-		Pf1N1B4_962	0.25	-1.5
1,092,327	-				-0.1
1,092,327	-		Pf1N1B4_962	0.25	+0.6
1,092,327	-		Pf1N1B4_962	0.25	+0.9
1,092,409	-		Pf1N1B4_962	0.38	-0.7
1,092,461	+		Pf1N1B4_962	0.47	-1.9
1,092,461	+		Pf1N1B4_962	0.47	-1.7
1,092,461	+		Pf1N1B4_962	0.47	-0.7
1,092,461	+		Pf1N1B4_962	0.47	-1.2
1,092,461	+		Pf1N1B4_962	0.47	-1.9
1,092,461	+		Pf1N1B4_962	0.47	-0.4
1,092,461	+		Pf1N1B4_962	0.47	-0.8
1,092,461	+		Pf1N1B4_962	0.47	+2.5
1,092,461	+		Pf1N1B4_962	0.47	-2.0
1,092,461	+		Pf1N1B4_962	0.47	+1.5
1,092,461	+		Pf1N1B4_962	0.47	-2.3
1,092,461	+		Pf1N1B4_962	0.47	-1.9
1,092,461	+		Pf1N1B4_962	0.47	-1.1
1,092,461	+		Pf1N1B4_962	0.47	-1.1
1,092,461	+		Pf1N1B4_962	0.47	-0.5
1,092,461	+		Pf1N1B4_962	0.47	-0.5
1,092,461	+		Pf1N1B4_962	0.47	+0.1
1,092,461	+		Pf1N1B4_962	0.47	+0.3
1,092,461	+		Pf1N1B4_962	0.47	-0.9
1,092,461	+		Pf1N1B4_962	0.47	-0.7
1,092,461	+		Pf1N1B4_962	0.47	-0.7
1,092,461	+		Pf1N1B4_962	0.47	-0.9
1,092,461	+		Pf1N1B4_962	0.47	-0.1
1,092,461	+		Pf1N1B4_962	0.47	-0.9
1,092,461	+		Pf1N1B4_962	0.47	-0.1
1,092,461	+		Pf1N1B4_962	0.47	-1.4
1,092,461	+		Pf1N1B4_962	0.47	-0.8
1,092,461	+		Pf1N1B4_962	0.47	-0.7
1,092,462	-		Pf1N1B4_962	0.47	+0.9
1,092,462	-		Pf1N1B4_962	0.47	+0.0
1,092,462	-		Pf1N1B4_962	0.47	+0.6
1,092,462	-		Pf1N1B4_962	0.47	-1.4
1,092,462	-		Pf1N1B4_962	0.47	+0.3
1,092,462	-		Pf1N1B4_962	0.47	-1.7
1,092,462	-		Pf1N1B4_962	0.47	-0.5
1,092,462	-		Pf1N1B4_962	0.47	+0.9
1,092,462	-		Pf1N1B4_962	0.47	-0.3
1,092,462	-		Pf1N1B4_962	0.47	+1.5
1,092,462	-		Pf1N1B4_962	0.47	-0.4
1,092,462	-				-1.1
1,092,462	-		Pf1N1B4_962	0.47	-0.1
1,092,462	-		Pf1N1B4_962	0.47	-0.5
1,092,462	-		Pf1N1B4_962	0.47	+0.2
1,092,462	-		Pf1N1B4_962	0.47	-0.5
1,092,462	-		Pf1N1B4_962	0.47	-0.3
1,092,462	-		Pf1N1B4_962	0.47	+1.3
1,092,462	-		Pf1N1B4_962	0.47	+0.9
1,092,462	-		Pf1N1B4_962	0.47	-1.1
1,092,462	-		Pf1N1B4_962	0.47	-1.3
1,092,462	-		Pf1N1B4_962	0.47	-0.7
1,092,462	-		Pf1N1B4_962	0.47	-1.4
1,092,462	-		Pf1N1B4_962	0.47	-2.8
1,092,730	+				-1.1
1,092,731	-				+0.4
1,092,806	+				-0.7
1,092,806	+				-0.1
1,092,806	+				-0.4
1,092,806	+				-0.1
1,092,806	+				-1.8
1,092,806	+				-0.7
1,092,807	-				+0.3
1,092,807	-				+0.1
1,092,807	-				-0.5
1,092,819	+				-0.3
1,092,819	+				+0.9
1,092,819	+				-0.7
1,092,819	+				+0.6
1,092,820	-				-1.1
1,092,820	-				-1.4
1,092,820	-				-1.5
1,092,820	-				-0.7
1,092,820	-				-0.1
1,092,820	-				-0.7
1,092,822	+				-1.7
1,092,822	+				+1.1
1,092,822	+				-0.3
1,092,822	+				-0.4
1,092,822	+				+0.9
1,092,822	+				-0.2
1,092,822	+				+0.9
1,092,822	+				+0.2
1,092,823	-				-2.4
1,092,823	-				-0.4
1,092,823	-				+1.2
1,092,823	-				-1.4
1,092,823	-				-0.5
1,092,823	-				-1.0
1,092,823	-				-0.5
1,092,823	-				+0.2
1,092,823	-				+0.9
1,092,826	+				+0.0
1,092,827	-				-1.1
1,092,827	-				+0.7
1,092,827	-				+1.3
1,092,827	-				+0.3
1,092,827	-				-0.1
1,092,827	-				-2.1
1,092,840	+				-1.2
1,092,840	+				-0.1
1,092,840	+				-1.7
1,092,840	+				+2.2
1,092,841	-				-1.1
1,092,861	+				+0.3
1,092,888	+				-1.4
1,092,888	+				+0.9
1,092,888	+				-0.4
1,092,888	+				-0.3
1,092,888	+				-1.6
1,092,888	+				-0.4
1,092,888	+				-1.7
1,092,888	+				-1.3
1,092,888	+				-0.7
1,092,888	+				-0.1
1,092,888	+				-0.5
1,092,888	+				-0.7
1,092,888	+				-0.1
1,092,888	+				-0.2
1,092,888	+				+1.2
1,092,888	+				-1.4
1,092,888	+				+2.9
1,092,888	+				+0.3
1,092,889	-				-1.9
1,092,889	-				-0.3
1,092,889	-				-0.3
1,092,889	-				-0.3
1,092,889	-				-0.4
1,092,889	-				+3.2
1,092,889	-				-0.8
1,092,889	-				+0.3
1,092,889	-				-0.7
1,092,889	-				+0.4
1,092,892	+				-0.5
1,092,925	+				+1.9
1,092,925	+				-1.4
1,092,925	+				-0.7
1,092,972	-				-2.4
1,092,984	+				-0.7