Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2609

Experiment: 5-Hydroxymethylfurfural 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 2.5 mM
2,946,720	-				-0.3
2,946,720	-				-1.7
2,946,737	+				-1.5
2,946,737	+				+0.9
2,946,738	-				-0.8
2,946,767	+				+0.5
2,946,767	+				+2.1
2,946,767	+				+1.9
2,946,767	+				+0.7
2,946,767	+				+0.1
2,946,767	+				-0.9
2,946,768	-				-1.1
2,946,768	-				-1.3
2,946,768	-				-0.6
2,946,768	-				-1.9
2,946,769	+				+0.7
2,946,769	+				+1.6
2,946,769	+				+1.8
2,946,769	+				+0.1
2,946,769	+				+1.4
2,946,769	+				+1.3
2,946,769	+				+0.4
2,946,769	+				+1.8
2,946,769	+				-0.2
2,946,770	-				+0.1
2,946,770	-				+0.5
2,946,770	-				-0.9
2,946,770	-				-0.5
2,946,849	+				-0.1
2,947,066	+		Pf1N1B4_2609	0.11	+0.1
2,947,066	+		Pf1N1B4_2609	0.11	+0.3
2,947,066	+		Pf1N1B4_2609	0.11	-0.3
2,947,067	-		Pf1N1B4_2609	0.11	-0.3
2,947,090	-		Pf1N1B4_2609	0.13	+0.1
2,947,125	+		Pf1N1B4_2609	0.15	-1.5
2,947,125	+		Pf1N1B4_2609	0.15	+0.6
2,947,125	+		Pf1N1B4_2609	0.15	-0.9
2,947,126	-		Pf1N1B4_2609	0.15	-0.0
2,947,126	-		Pf1N1B4_2609	0.15	+0.2
2,947,126	-		Pf1N1B4_2609	0.15	-0.3
2,947,192	+		Pf1N1B4_2609	0.20	+0.1
2,947,193	-		Pf1N1B4_2609	0.20	+0.1
2,947,193	-		Pf1N1B4_2609	0.20	+1.1
2,947,193	-		Pf1N1B4_2609	0.20	+0.3
2,947,193	-		Pf1N1B4_2609	0.20	-1.7
2,947,193	-				-0.5
2,947,193	-		Pf1N1B4_2609	0.20	-0.7
2,947,254	+		Pf1N1B4_2609	0.24	-0.8
2,947,255	-		Pf1N1B4_2609	0.24	+0.4
2,947,286	+		Pf1N1B4_2609	0.26	-0.5
2,947,437	-		Pf1N1B4_2609	0.37	+0.1
2,947,503	+		Pf1N1B4_2609	0.41	-1.5
2,947,503	+		Pf1N1B4_2609	0.41	+0.3
2,947,503	+		Pf1N1B4_2609	0.41	-1.3
2,947,504	-		Pf1N1B4_2609	0.41	-1.3
2,947,504	-		Pf1N1B4_2609	0.41	+0.1
2,947,504	-				+0.1
2,947,551	+		Pf1N1B4_2609	0.45	-1.8
2,947,551	+		Pf1N1B4_2609	0.45	-0.3
2,947,551	+		Pf1N1B4_2609	0.45	+0.8
2,947,552	-		Pf1N1B4_2609	0.45	-0.7
2,947,624	-		Pf1N1B4_2609	0.50	-1.1
2,947,687	+		Pf1N1B4_2609	0.54	-1.7
2,947,687	+		Pf1N1B4_2609	0.54	-1.7
2,947,687	+		Pf1N1B4_2609	0.54	-0.3
2,947,687	+		Pf1N1B4_2609	0.54	-2.1
2,947,687	+		Pf1N1B4_2609	0.54	+1.6
2,947,687	+		Pf1N1B4_2609	0.54	-1.4
2,947,687	+		Pf1N1B4_2609	0.54	-1.0
2,947,687	+		Pf1N1B4_2609	0.54	+0.3
2,947,687	+		Pf1N1B4_2609	0.54	-0.2
2,947,687	+		Pf1N1B4_2609	0.54	+0.5
2,947,687	+		Pf1N1B4_2609	0.54	+0.5
2,947,687	+				+0.1
2,947,687	+		Pf1N1B4_2609	0.54	+0.4
2,947,687	+		Pf1N1B4_2609	0.54	-1.5
2,947,687	+		Pf1N1B4_2609	0.54	-1.4
2,947,687	+		Pf1N1B4_2609	0.54	+0.1
2,947,687	+		Pf1N1B4_2609	0.54	-0.6
2,947,687	+		Pf1N1B4_2609	0.54	+0.5
2,947,688	-		Pf1N1B4_2609	0.54	+0.3
2,947,688	-		Pf1N1B4_2609	0.54	-0.1
2,947,688	-		Pf1N1B4_2609	0.54	-2.3
2,947,688	-		Pf1N1B4_2609	0.54	+1.1
2,947,688	-				+1.1
2,947,688	-		Pf1N1B4_2609	0.54	-2.0
2,947,688	-		Pf1N1B4_2609	0.54	-0.7
2,947,806	-		Pf1N1B4_2609	0.62	-1.3
2,947,818	+		Pf1N1B4_2609	0.63	+0.3
2,947,818	+		Pf1N1B4_2609	0.63	-2.1
2,947,818	+		Pf1N1B4_2609	0.63	-0.7
2,947,879	+		Pf1N1B4_2609	0.67	-0.9
2,947,879	+		Pf1N1B4_2609	0.67	-0.1
2,947,994	+		Pf1N1B4_2609	0.75	-0.3
2,947,994	+		Pf1N1B4_2609	0.75	+0.3
2,947,994	+		Pf1N1B4_2609	0.75	+0.1
2,947,994	+		Pf1N1B4_2609	0.75	-0.5
2,947,994	+		Pf1N1B4_2609	0.75	-2.3
2,947,994	+		Pf1N1B4_2609	0.75	+0.1
2,947,994	+		Pf1N1B4_2609	0.75	-0.2
2,947,994	+		Pf1N1B4_2609	0.75	+0.6
2,947,994	+		Pf1N1B4_2609	0.75	-0.1
2,947,994	+		Pf1N1B4_2609	0.75	+0.1
2,947,994	+		Pf1N1B4_2609	0.75	+0.5
2,947,995	-		Pf1N1B4_2609	0.75	-1.1
2,947,995	-		Pf1N1B4_2609	0.75	+0.5
2,947,995	-		Pf1N1B4_2609	0.75	+0.1
2,947,995	-		Pf1N1B4_2609	0.75	+0.1
2,947,995	-		Pf1N1B4_2609	0.75	-1.1
2,947,995	-		Pf1N1B4_2609	0.75	+1.1
2,947,995	-		Pf1N1B4_2609	0.75	+2.1
2,947,995	-		Pf1N1B4_2609	0.75	-2.3
2,947,995	-		Pf1N1B4_2609	0.75	-0.5
2,947,995	-		Pf1N1B4_2609	0.75	-0.9
2,947,995	-		Pf1N1B4_2609	0.75	-0.5
2,947,998	+		Pf1N1B4_2609	0.75	+0.2
2,947,998	+		Pf1N1B4_2609	0.75	-0.3
2,947,998	+		Pf1N1B4_2609	0.75	+2.1
2,948,052	+		Pf1N1B4_2609	0.79	-1.5
2,948,052	+		Pf1N1B4_2609	0.79	-0.5
2,948,052	+		Pf1N1B4_2609	0.79	-0.5
2,948,052	+		Pf1N1B4_2609	0.79	-1.1
2,948,053	-		Pf1N1B4_2609	0.79	-1.3
2,948,053	-		Pf1N1B4_2609	0.79	-0.6
2,948,053	-		Pf1N1B4_2609	0.79	-0.9
2,948,067	+		Pf1N1B4_2609	0.80	+0.8
2,948,067	+		Pf1N1B4_2609	0.80	-1.4
2,948,067	+		Pf1N1B4_2609	0.80	-0.5
2,948,067	+		Pf1N1B4_2609	0.80	-2.7
2,948,067	+		Pf1N1B4_2609	0.80	-0.4
2,948,067	+		Pf1N1B4_2609	0.80	-0.9
2,948,067	+		Pf1N1B4_2609	0.80	-0.7
2,948,067	+		Pf1N1B4_2609	0.80	-0.9
2,948,067	+		Pf1N1B4_2609	0.80	-1.2
2,948,067	+		Pf1N1B4_2609	0.80	-1.5
2,948,068	-		Pf1N1B4_2609	0.80	+1.5
2,948,068	-		Pf1N1B4_2609	0.80	-1.2
2,948,068	-		Pf1N1B4_2609	0.80	-0.5
2,948,068	-		Pf1N1B4_2609	0.80	+0.4
2,948,068	-		Pf1N1B4_2609	0.80	-1.4
2,948,068	-		Pf1N1B4_2609	0.80	+0.3
2,948,068	-		Pf1N1B4_2609	0.80	-1.1
2,948,097	+		Pf1N1B4_2609	0.82	-0.8
2,948,157	-		Pf1N1B4_2609	0.86	+0.1
2,948,163	+		Pf1N1B4_2609	0.87	-0.7
2,948,163	+		Pf1N1B4_2609	0.87	-1.9
2,948,163	+		Pf1N1B4_2609	0.87	-0.5
2,948,164	-		Pf1N1B4_2609	0.87	-0.1
2,948,164	-		Pf1N1B4_2609	0.87	-0.7
2,948,166	+		Pf1N1B4_2609	0.87	+0.2
2,948,166	+		Pf1N1B4_2609	0.87	-0.5
2,948,166	+		Pf1N1B4_2609	0.87	-0.9
2,948,166	+		Pf1N1B4_2609	0.87	+0.5
2,948,167	-		Pf1N1B4_2609	0.87	-0.6
2,948,167	-				-0.5
2,948,167	-		Pf1N1B4_2609	0.87	+0.5
2,948,167	-		Pf1N1B4_2609	0.87	-0.5
2,948,341	+				-0.6
2,948,348	+				+2.1
2,948,405	+				-1.8
2,948,406	-				-1.1
2,948,406	-				+0.5
2,948,406	-				+1.1
2,948,406	-				+0.2
2,948,406	-				-0.3
2,948,425	-				-0.9
2,948,425	-				-0.3
2,948,436	+				-0.7
2,948,437	-				+0.4
2,948,479	+				-0.4
2,948,479	+				+0.2
2,948,479	+				+0.8
2,948,480	-				+1.4
2,948,503	+				+1.3
2,948,503	+				-0.9
2,948,504	-				-0.8
2,948,504	-				+1.1
2,948,504	-				+1.1
2,948,504	-				+1.6
2,948,504	-				-1.1
2,948,529	+				-0.1
2,948,529	+				-2.1
2,948,530	-				+2.9
2,948,537	+				-0.3
2,948,582	+		Pf1N1B4_2610	0.15	+1.5
2,948,582	+		Pf1N1B4_2610	0.15	+0.5
2,948,582	+		Pf1N1B4_2610	0.15	+0.1
2,948,583	-		Pf1N1B4_2610	0.16	+0.3
2,948,603	+		Pf1N1B4_2610	0.20	-1.5
2,948,603	+		Pf1N1B4_2610	0.20	-0.9
2,948,603	+		Pf1N1B4_2610	0.20	+0.6
2,948,603	+		Pf1N1B4_2610	0.20	-1.7
2,948,603	+		Pf1N1B4_2610	0.20	-1.3
2,948,604	-		Pf1N1B4_2610	0.20	-1.3
2,948,604	-		Pf1N1B4_2610	0.20	+1.1
2,948,604	-		Pf1N1B4_2610	0.20	+1.4
2,948,604	-		Pf1N1B4_2610	0.20	-0.5
2,948,630	+		Pf1N1B4_2610	0.26	+0.3
2,948,631	-		Pf1N1B4_2610	0.26	+0.7
2,948,638	+				+1.1
2,948,638	+		Pf1N1B4_2610	0.28	-0.4
2,948,638	+		Pf1N1B4_2610	0.28	+0.3
2,948,638	+		Pf1N1B4_2610	0.28	-2.1
2,948,638	+		Pf1N1B4_2610	0.28	+1.1
2,948,639	-		Pf1N1B4_2610	0.28	-0.7
2,948,639	-		Pf1N1B4_2610	0.28	-1.4
2,948,692	+		Pf1N1B4_2610	0.39	+2.1
2,948,789	+		Pf1N1B4_2610	0.60	-0.4
2,948,789	+		Pf1N1B4_2610	0.60	-0.9
2,948,789	+		Pf1N1B4_2610	0.60	-0.3
2,948,789	+		Pf1N1B4_2610	0.60	-0.7
2,948,789	+		Pf1N1B4_2610	0.60	+0.3
2,948,790	-		Pf1N1B4_2610	0.60	-2.4
2,948,790	-		Pf1N1B4_2610	0.60	+0.2
2,948,790	-		Pf1N1B4_2610	0.60	+1.3
2,948,846	+		Pf1N1B4_2610	0.72	+0.8
2,948,846	+		Pf1N1B4_2610	0.72	+1.1
2,948,846	+		Pf1N1B4_2610	0.72	-1.4
2,948,846	+		Pf1N1B4_2610	0.72	+0.9
2,948,846	+		Pf1N1B4_2610	0.72	-1.4
2,948,846	+		Pf1N1B4_2610	0.72	+0.3
2,948,846	+		Pf1N1B4_2610	0.72	+0.1
2,948,846	+		Pf1N1B4_2610	0.72	-0.7
2,948,846	+		Pf1N1B4_2610	0.72	-0.7
2,948,846	+		Pf1N1B4_2610	0.72	+0.3
2,948,846	+		Pf1N1B4_2610	0.72	-1.5
2,948,846	+		Pf1N1B4_2610	0.72	+0.1
2,948,846	+		Pf1N1B4_2610	0.72	+0.4
2,948,847	-		Pf1N1B4_2610	0.72	-0.9
2,948,847	-		Pf1N1B4_2610	0.72	-0.3
2,948,847	-		Pf1N1B4_2610	0.72	-0.3
2,948,847	-		Pf1N1B4_2610	0.72	+0.2
2,948,847	-		Pf1N1B4_2610	0.72	-0.9
2,948,847	-		Pf1N1B4_2610	0.72	+0.8
2,948,903	+		Pf1N1B4_2610	0.85	-0.3
2,948,904	-		Pf1N1B4_2610	0.85	-0.8
2,948,954	+				+1.1
2,948,954	+				-0.3
2,948,954	+				+0.8
2,948,954	+				+0.3
2,948,954	+				-0.2
2,948,954	+				+1.2
2,948,955	-				+1.1
2,948,955	-				-2.3
2,948,955	-				+1.5
2,949,072	+				-2.4
2,949,072	+				-0.7
2,949,073	-				+1.1
2,949,227	-				-0.8
2,949,230	-				-1.5
2,949,254	+				+1.1
2,949,255	-				+0.5
2,949,296	-				-0.1
2,949,313	+				+1.6
2,949,314	-				-0.3
2,949,314	-				+0.2
2,949,314	-				-0.8
2,949,314	-				+0.4
2,949,315	+				-0.4
2,949,316	-				-1.4
2,949,316	-				-0.4
2,949,316	-				-0.4