Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2246

Experiment: 5-Hydroxymethylfurfural 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 2.5 mM
2,561,903	+		Pf1N1B4_2245	0.49	-0.5
2,561,903	+		Pf1N1B4_2245	0.49	+0.1
2,561,903	+		Pf1N1B4_2245	0.49	-0.1
2,561,904	-		Pf1N1B4_2245	0.49	-0.5
2,561,904	-		Pf1N1B4_2245	0.49	+0.8
2,561,904	-		Pf1N1B4_2245	0.49	+0.0
2,561,934	-		Pf1N1B4_2245	0.51	+1.4
2,561,934	-				+1.7
2,561,936	+		Pf1N1B4_2245	0.51	+1.1
2,561,936	+		Pf1N1B4_2245	0.51	-0.3
2,561,936	+		Pf1N1B4_2245	0.51	+1.1
2,561,936	+		Pf1N1B4_2245	0.51	+0.1
2,561,936	+		Pf1N1B4_2245	0.51	+0.1
2,561,936	+		Pf1N1B4_2245	0.51	+0.1
2,561,936	+		Pf1N1B4_2245	0.51	-1.2
2,561,936	+		Pf1N1B4_2245	0.51	-0.0
2,561,937	-		Pf1N1B4_2245	0.51	-2.2
2,561,937	-		Pf1N1B4_2245	0.51	-0.3
2,561,937	-		Pf1N1B4_2245	0.51	-0.0
2,561,937	-		Pf1N1B4_2245	0.51	+0.9
2,561,937	-		Pf1N1B4_2245	0.51	-0.1
2,561,937	-		Pf1N1B4_2245	0.51	+0.7
2,561,937	-		Pf1N1B4_2245	0.51	+0.1
2,561,937	-		Pf1N1B4_2245	0.51	+0.7
2,561,937	-		Pf1N1B4_2245	0.51	+0.6
2,561,937	-		Pf1N1B4_2245	0.51	+0.4
2,561,939	+		Pf1N1B4_2245	0.51	+0.1
2,561,939	+		Pf1N1B4_2245	0.51	-1.1
2,561,939	+		Pf1N1B4_2245	0.51	-0.5
2,561,940	-		Pf1N1B4_2245	0.51	-0.0
2,561,940	-		Pf1N1B4_2245	0.51	-0.1
2,561,960	+		Pf1N1B4_2245	0.53	-0.9
2,561,960	+		Pf1N1B4_2245	0.53	-0.9
2,561,960	+		Pf1N1B4_2245	0.53	-1.2
2,561,960	+		Pf1N1B4_2245	0.53	-0.9
2,561,960	+		Pf1N1B4_2245	0.53	-0.2
2,561,961	-		Pf1N1B4_2245	0.53	-0.9
2,561,961	-		Pf1N1B4_2245	0.53	+0.1
2,561,961	-		Pf1N1B4_2245	0.53	-0.8
2,561,961	-		Pf1N1B4_2245	0.53	+0.3
2,561,961	-		Pf1N1B4_2245	0.53	+0.0
2,561,961	-		Pf1N1B4_2245	0.53	+1.6
2,562,032	+		Pf1N1B4_2245	0.58	-0.1
2,562,033	-		Pf1N1B4_2245	0.58	-0.5
2,562,033	-		Pf1N1B4_2245	0.58	-2.2
2,562,077	+		Pf1N1B4_2245	0.61	-0.2
2,562,077	+		Pf1N1B4_2245	0.61	-0.3
2,562,077	+		Pf1N1B4_2245	0.61	+0.1
2,562,077	+		Pf1N1B4_2245	0.61	-0.5
2,562,077	+		Pf1N1B4_2245	0.61	-0.5
2,562,078	-		Pf1N1B4_2245	0.61	+0.4
2,562,078	-		Pf1N1B4_2245	0.61	+0.1
2,562,078	-		Pf1N1B4_2245	0.61	+0.6
2,562,140	+		Pf1N1B4_2245	0.66	+0.0
2,562,140	+		Pf1N1B4_2245	0.66	-0.5
2,562,158	+		Pf1N1B4_2245	0.67	-1.2
2,562,254	+		Pf1N1B4_2245	0.74	+1.7
2,562,254	+		Pf1N1B4_2245	0.74	+0.1
2,562,254	+		Pf1N1B4_2245	0.74	+0.9
2,562,254	+		Pf1N1B4_2245	0.74	+0.1
2,562,254	+		Pf1N1B4_2245	0.74	-0.4
2,562,254	+		Pf1N1B4_2245	0.74	+1.1
2,562,254	+		Pf1N1B4_2245	0.74	-0.5
2,562,255	-		Pf1N1B4_2245	0.74	-1.2
2,562,255	-		Pf1N1B4_2245	0.74	-0.0
2,562,255	-		Pf1N1B4_2245	0.74	+0.1
2,562,255	-		Pf1N1B4_2245	0.74	+1.1
2,562,255	-		Pf1N1B4_2245	0.74	-0.2
2,562,255	-		Pf1N1B4_2245	0.74	+0.1
2,562,255	-		Pf1N1B4_2245	0.74	+0.5
2,562,255	-		Pf1N1B4_2245	0.74	-0.5
2,562,258	+		Pf1N1B4_2245	0.75	+0.2
2,562,258	+		Pf1N1B4_2245	0.75	+0.1
2,562,258	+		Pf1N1B4_2245	0.75	-0.5
2,562,258	+		Pf1N1B4_2245	0.75	-0.3
2,562,258	+		Pf1N1B4_2245	0.75	+0.7
2,562,258	+		Pf1N1B4_2245	0.75	-0.2
2,562,258	+		Pf1N1B4_2245	0.75	-1.3
2,562,258	+		Pf1N1B4_2245	0.75	+0.7
2,562,258	+		Pf1N1B4_2245	0.75	-0.9
2,562,258	+		Pf1N1B4_2245	0.75	+0.1
2,562,258	+		Pf1N1B4_2245	0.75	+1.5
2,562,258	+		Pf1N1B4_2245	0.75	-1.2
2,562,258	+		Pf1N1B4_2245	0.75	+0.6
2,562,258	+		Pf1N1B4_2245	0.75	-0.1
2,562,258	+		Pf1N1B4_2245	0.75	+0.4
2,562,258	+		Pf1N1B4_2245	0.75	+0.8
2,562,258	+		Pf1N1B4_2245	0.75	-1.2
2,562,259	-		Pf1N1B4_2245	0.75	-1.2
2,562,259	-		Pf1N1B4_2245	0.75	+1.1
2,562,259	-		Pf1N1B4_2245	0.75	-0.8
2,562,259	-		Pf1N1B4_2245	0.75	+0.1
2,562,259	-		Pf1N1B4_2245	0.75	-1.0
2,562,259	-		Pf1N1B4_2245	0.75	-1.5
2,562,259	-		Pf1N1B4_2245	0.75	-1.5
2,562,259	-		Pf1N1B4_2245	0.75	-0.5
2,562,259	-		Pf1N1B4_2245	0.75	-0.2
2,562,259	-		Pf1N1B4_2245	0.75	-1.0
2,562,259	-		Pf1N1B4_2245	0.75	-0.5
2,562,259	-		Pf1N1B4_2245	0.75	+1.7
2,562,262	+		Pf1N1B4_2245	0.75	+0.3
2,562,262	+		Pf1N1B4_2245	0.75	-0.3
2,562,263	-		Pf1N1B4_2245	0.75	-0.3
2,562,304	+		Pf1N1B4_2245	0.78	+1.1
2,562,304	+		Pf1N1B4_2245	0.78	-0.5
2,562,304	+		Pf1N1B4_2245	0.78	+1.7
2,562,304	+		Pf1N1B4_2245	0.78	+0.1
2,562,305	-		Pf1N1B4_2245	0.78	-0.0
2,562,305	-		Pf1N1B4_2245	0.78	-0.0
2,562,305	-		Pf1N1B4_2245	0.78	-0.7
2,562,326	+		Pf1N1B4_2245	0.80	+0.7
2,562,326	+		Pf1N1B4_2245	0.80	-0.9
2,562,326	+		Pf1N1B4_2245	0.80	-0.3
2,562,326	+		Pf1N1B4_2245	0.80	-1.8
2,562,327	-		Pf1N1B4_2245	0.80	+0.6
2,562,374	+		Pf1N1B4_2245	0.83	+2.0
2,562,375	-		Pf1N1B4_2245	0.83	-0.4
2,562,375	-		Pf1N1B4_2245	0.83	-0.2
2,562,375	-		Pf1N1B4_2245	0.83	-0.6
2,562,375	-		Pf1N1B4_2245	0.83	-0.1
2,562,406	+		Pf1N1B4_2245	0.86	-2.2
2,562,467	+				+1.1
2,562,467	+				+0.3
2,562,467	+				-0.9
2,562,467	+				-0.1
2,562,468	-				+0.1
2,562,468	-				+0.1
2,562,468	-				+0.1
2,562,468	-				+0.6
2,562,468	-				+0.6
2,562,468	-				+0.3
2,562,468	-				-0.3
2,562,471	+				+0.4
2,562,471	+				-0.2
2,562,471	+				+0.1
2,562,471	+				-0.3
2,562,471	+				+0.4
2,562,471	+				-0.5
2,562,471	+				-2.0
2,562,471	+				-1.2
2,562,472	-				-1.2
2,562,472	-				+0.9
2,562,472	-				-0.8
2,562,472	-				+0.7
2,562,472	-				-0.0
2,562,472	-				+0.1
2,562,472	-				-0.7
2,562,472	-				+0.1
2,562,472	-				+0.0
2,562,472	-				-1.6
2,562,472	-				-1.2
2,562,472	-				+0.9
2,562,472	-				+1.3
2,562,472	-				-0.6
2,562,472	-				+0.4
2,562,472	-				-0.4
2,562,472	-				-0.8
2,562,472	-				+0.4
2,562,472	-				-1.9
2,562,472	-				-0.9
2,562,472	-				+0.9
2,562,474	+				-0.2
2,562,474	+				-0.5
2,562,474	+				+0.8
2,562,474	+				+0.3
2,562,474	+				+1.1
2,562,474	+				-0.3
2,562,475	-				-0.3
2,562,475	-				-0.3
2,562,475	-				-1.5
2,562,581	+				+0.9
2,562,582	-				-0.8
2,562,582	-				+0.5
2,562,582	-				+0.5
2,562,599	+				-1.2
2,562,599	+				+2.7
2,562,600	-				-1.0
2,562,600	-				-1.7
2,562,600	-				+0.9
2,562,600	-				+0.5
2,562,690	-				+0.4
2,562,768	+				+0.3
2,562,769	-				-1.1
2,562,769	-				+0.3
2,562,981	+		Pf1N1B4_2246	0.13	-1.2
2,562,982	-		Pf1N1B4_2246	0.14	+1.9
2,563,216	+		Pf1N1B4_2246	0.50	-0.3
2,563,216	+		Pf1N1B4_2246	0.50	+0.4
2,563,216	+		Pf1N1B4_2246	0.50	-0.3
2,563,216	+		Pf1N1B4_2246	0.50	-0.9
2,563,216	+		Pf1N1B4_2246	0.50	+0.2
2,563,216	+		Pf1N1B4_2246	0.50	+0.1
2,563,217	-		Pf1N1B4_2246	0.50	-1.2
2,563,217	-		Pf1N1B4_2246	0.50	+0.5
2,563,256	+		Pf1N1B4_2246	0.56	+0.5
2,563,256	+		Pf1N1B4_2246	0.56	-0.5
2,563,256	+		Pf1N1B4_2246	0.56	-0.9
2,563,256	+		Pf1N1B4_2246	0.56	-0.2
2,563,256	+		Pf1N1B4_2246	0.56	+2.0
2,563,256	+		Pf1N1B4_2246	0.56	+1.1
2,563,256	+		Pf1N1B4_2246	0.56	-0.0
2,563,257	-		Pf1N1B4_2246	0.57	+0.6
2,563,257	-		Pf1N1B4_2246	0.57	+0.1
2,563,257	-		Pf1N1B4_2246	0.57	+0.5
2,563,257	-		Pf1N1B4_2246	0.57	-1.9
2,563,257	-		Pf1N1B4_2246	0.57	+1.1
2,563,257	-		Pf1N1B4_2246	0.57	+1.9
2,563,257	-		Pf1N1B4_2246	0.57	-1.0
2,563,257	-		Pf1N1B4_2246	0.57	-0.3
2,563,257	-		Pf1N1B4_2246	0.57	+0.5
2,563,257	-		Pf1N1B4_2246	0.57	-0.2
2,563,257	-		Pf1N1B4_2246	0.57	-1.2
2,563,257	-		Pf1N1B4_2246	0.57	+0.5
2,563,263	+		Pf1N1B4_2246	0.58	-1.2
2,563,305	+		Pf1N1B4_2246	0.64	-0.6
2,563,310	-		Pf1N1B4_2246	0.65	-1.2
2,563,310	-		Pf1N1B4_2246	0.65	+0.6
2,563,310	-		Pf1N1B4_2246	0.65	-0.9
2,563,310	-		Pf1N1B4_2246	0.65	+1.7
2,563,381	+		Pf1N1B4_2246	0.76	+0.5
2,563,381	+		Pf1N1B4_2246	0.76	+0.1
2,563,381	+		Pf1N1B4_2246	0.76	+1.5
2,563,381	+		Pf1N1B4_2246	0.76	+0.4
2,563,381	+		Pf1N1B4_2246	0.76	+1.7
2,563,381	+		Pf1N1B4_2246	0.76	-0.3
2,563,381	+		Pf1N1B4_2246	0.76	+0.7
2,563,381	+		Pf1N1B4_2246	0.76	+0.1
2,563,382	-		Pf1N1B4_2246	0.76	+1.1
2,563,382	-		Pf1N1B4_2246	0.76	+0.0
2,563,382	-		Pf1N1B4_2246	0.76	+0.5
2,563,531	+				-0.5
2,563,531	+				+1.1
2,563,531	+				-0.2
2,563,532	-				+1.1
2,563,626	+				-1.2
2,563,626	+				+1.4
2,563,627	-				+0.6
2,563,696	-				-0.2
2,563,806	+				+1.3
2,563,818	+				-0.6
2,563,818	+				-0.1
2,563,819	-				+0.7
2,563,994	+		Pf1N1B4_2247	0.18	-0.5
2,563,994	+		Pf1N1B4_2247	0.18	+1.7
2,564,002	-		Pf1N1B4_2247	0.20	-0.9
2,564,051	-		Pf1N1B4_2247	0.28	-0.9
2,564,157	+		Pf1N1B4_2247	0.46	+0.4
2,564,158	-		Pf1N1B4_2247	0.46	-0.1
2,564,225	-		Pf1N1B4_2247	0.57	-0.5
2,564,225	-		Pf1N1B4_2247	0.57	+1.9
2,564,478	-				-1.5
2,564,478	-				-0.7
2,564,478	-				+0.2
2,564,478	-				-0.3
2,564,478	-				-0.5
2,564,511	+				-1.2