Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1282

Experiment: 5-Hydroxymethylfurfural 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 2.5 mM
1,462,075	+				+0.3
1,462,075	+				-0.3
1,462,075	+				+0.3
1,462,075	+				+0.0
1,462,075	+				+0.5
1,462,075	+				-0.5
1,462,075	+				-1.0
1,462,075	+				-0.2
1,462,075	+				+0.2
1,462,075	+				+1.1
1,462,239	+				+0.1
1,462,239	+				+0.5
1,462,239	+				+0.4
1,462,239	+				-1.1
1,462,239	+				+0.5
1,462,239	+				-0.5
1,462,239	+				-0.2
1,462,239	+				+1.1
1,462,240	-				+0.2
1,462,240	-				-1.6
1,462,303	+				-0.2
1,462,334	+				-0.9
1,462,334	+				+1.6
1,462,334	+				-0.9
1,462,334	+				-0.7
1,462,334	+				-0.9
1,462,334	+				-1.5
1,462,334	+				+1.1
1,462,334	+				+0.4
1,462,334	+				+0.7
1,462,335	-				-0.4
1,462,335	-				+0.2
1,462,335	-				+0.3
1,462,335	-				-1.7
1,462,344	+				+0.3
1,462,355	-				-0.4
1,462,423	+				+0.2
1,462,424	-				-1.3
1,462,549	+				+0.1
1,462,549	+				-0.2
1,462,549	+				-1.5
1,462,549	+				+0.8
1,462,549	+				+0.8
1,462,549	+				+0.3
1,462,550	-				+0.4
1,462,550	-				-1.3
1,462,550	-				+1.2
1,462,552	-				-0.6
1,462,552	-				+0.6
1,462,557	+				-0.4
1,462,557	+				+0.7
1,462,557	+				-0.5
1,462,557	+				-0.7
1,462,557	+				+0.1
1,462,557	+				-0.1
1,462,557	+				+1.1
1,462,557	+				+0.6
1,462,557	+				-1.1
1,462,557	+				+1.1
1,462,557	+				-0.4
1,462,557	+				-1.5
1,462,557	+				-0.4
1,462,557	+				-0.7
1,462,557	+				-0.7
1,462,557	+				+0.9
1,462,557	+				-0.7
1,462,557	+				+1.1
1,462,558	-				+1.5
1,462,558	-				+0.3
1,462,558	-				-1.6
1,462,558	-				+0.5
1,462,558	-				-0.0
1,462,558	-				+0.2
1,462,558	-				+0.2
1,462,610	+				+1.5
1,462,671	-				+0.1
1,462,827	+				+0.7
1,462,828	-				-1.3
1,462,828	-				-1.9
1,462,843	+				-0.9
1,462,843	+				+1.1
1,462,844	-				+0.5
1,462,844	-				-0.3
1,462,911	+				-0.9
1,462,911	+				-1.3
1,462,911	+				+0.6
1,462,924	+				+1.1
1,462,925	-				+3.1
1,462,925	-				+0.6
1,462,925	-				+0.1
1,462,925	-				-1.5
1,462,996	-				+1.5
1,463,013	+				-0.3
1,463,014	-				+0.7
1,463,035	-				-0.1
1,463,035	-				+2.6
1,463,035	-				+0.8
1,463,071	-				+0.5
1,463,076	+				+0.4
1,463,077	-				+0.9
1,463,077	-				+0.1
1,463,105	+		Pf1N1B4_1282	0.13	-0.7
1,463,105	+		Pf1N1B4_1282	0.13	-1.9
1,463,105	+		Pf1N1B4_1282	0.13	+1.1
1,463,106	-		Pf1N1B4_1282	0.13	-1.3
1,463,106	-		Pf1N1B4_1282	0.13	-0.9
1,463,106	-		Pf1N1B4_1282	0.13	-2.1
1,463,153	+		Pf1N1B4_1282	0.19	-0.3
1,463,154	-		Pf1N1B4_1282	0.19	-1.7
1,463,321	+		Pf1N1B4_1282	0.40	-0.9
1,463,322	-		Pf1N1B4_1282	0.41	-0.2
1,463,463	-		Pf1N1B4_1282	0.58	-1.5
1,463,465	+		Pf1N1B4_1282	0.59	+0.7
1,463,466	-		Pf1N1B4_1282	0.59	+0.6
1,463,466	-		Pf1N1B4_1282	0.59	+0.5
1,463,466	-		Pf1N1B4_1282	0.59	-0.5
1,463,767	+				-0.7
1,463,768	-				+0.1
1,463,768	-				+0.6
1,463,778	+				+1.6
1,463,779	-				+1.6
1,463,779	-				-0.9
1,463,779	-				-0.1
1,463,837	+				+0.3
1,463,837	+				-0.2
1,463,837	+				+1.1
1,463,837	+				-0.3
1,463,857	+				+0.9
1,463,857	+				+0.1
1,463,858	-				+0.5
1,463,858	-				-0.3
1,463,874	+				-0.1
1,463,874	+				+1.1
1,463,874	+				+0.9
1,463,874	+				+1.2
1,463,874	+				+2.1
1,463,874	+				-0.9
1,463,874	+				-0.4
1,463,874	+				+0.1
1,463,875	-				-1.1
1,463,875	-				+1.3
1,463,875	-				+0.7
1,463,875	-				-1.3
1,463,875	-				+0.7
1,463,875	-				-0.3
1,463,875	-				-0.5
1,463,875	-				-0.9
1,463,875	-				+0.6
1,463,875	-				+1.1
1,463,875	-				-0.2
1,463,878	+				-0.2
1,463,878	+				+0.4
1,463,878	+				+0.5
1,463,878	+				+1.1
1,463,878	+				-0.7
1,463,878	+				+2.1
1,463,879	-				+1.5
1,463,879	-				+0.1
1,463,879	-				-0.5
1,463,879	-				-1.1
1,463,879	-				+0.8
1,463,882	+				-0.9
1,463,882	+				+0.6
1,463,883	-				-0.4
1,463,883	-				-0.2
1,463,883	-				-0.1
1,463,883	-				+1.1
1,463,883	-				-0.7
1,463,883	-				-0.6
1,463,883	-				+0.1
1,463,883	-				+0.1
1,463,883	-				+0.3
1,463,883	-				+0.1
1,463,924	+				+2.1
1,463,924	+				-0.5
1,463,925	-				+1.1
1,463,925	-				+1.1
1,463,925	-				-0.3
1,463,944	-				+1.1
1,463,990	-		Pf1N1B4_1283	0.18	+0.1
1,464,020	+		Pf1N1B4_1283	0.25	+0.9
1,464,021	-		Pf1N1B4_1283	0.25	-0.7
1,464,022	+		Pf1N1B4_1283	0.25	+0.5
1,464,022	+		Pf1N1B4_1283	0.25	-0.5
1,464,022	+		Pf1N1B4_1283	0.25	-0.9
1,464,022	+		Pf1N1B4_1283	0.25	-2.1
1,464,023	-		Pf1N1B4_1283	0.25	-1.0
1,464,023	-		Pf1N1B4_1283	0.25	-0.9
1,464,023	-		Pf1N1B4_1283	0.25	+0.6
1,464,023	-		Pf1N1B4_1283	0.25	-1.7
1,464,023	-		Pf1N1B4_1283	0.25	+0.8
1,464,023	-		Pf1N1B4_1283	0.25	+0.5
1,464,023	-		Pf1N1B4_1283	0.25	+0.5
1,464,023	-		Pf1N1B4_1283	0.25	-0.1
1,464,023	-		Pf1N1B4_1283	0.25	-1.3
1,464,023	-		Pf1N1B4_1283	0.25	-0.6
1,464,023	-				-0.7
1,464,023	-		Pf1N1B4_1283	0.25	-0.9
1,464,262	+		Pf1N1B4_1283	0.76	+0.2
1,464,262	+		Pf1N1B4_1283	0.76	+0.5
1,464,262	+		Pf1N1B4_1283	0.76	-0.5
1,464,262	+		Pf1N1B4_1283	0.76	+1.1
1,464,262	+		Pf1N1B4_1283	0.76	+0.7
1,464,263	-		Pf1N1B4_1283	0.76	-0.5
1,464,263	-		Pf1N1B4_1283	0.76	+0.5
1,464,263	-		Pf1N1B4_1283	0.76	+1.9
1,464,263	-		Pf1N1B4_1283	0.76	-0.7
1,464,263	-		Pf1N1B4_1283	0.76	+0.8
1,464,263	-		Pf1N1B4_1283	0.76	+0.5
1,464,276	+		Pf1N1B4_1283	0.79	+0.7
1,464,276	+		Pf1N1B4_1283	0.79	-0.4
1,464,277	-		Pf1N1B4_1283	0.79	+0.4
1,464,277	-		Pf1N1B4_1283	0.79	+0.1
1,464,353	+				-0.1
1,464,353	+				+0.4
1,464,354	-				+0.3
1,464,354	-				+0.5
1,464,354	-				-0.5
1,464,354	-				+1.1
1,464,354	-				+0.5
1,464,354	-				+0.3
1,464,354	-				+0.3
1,464,358	-				+1.5
1,464,382	+				+1.1
1,464,383	-				+0.3
1,464,383	-				-0.5
1,464,383	-				+0.8
1,464,383	-				+0.6
1,464,409	+				+1.4
1,464,409	+				-0.3
1,464,409	+				-0.4
1,464,410	-				+1.1
1,464,410	-				+0.9
1,464,410	-				+0.6
1,464,410	-				+0.4
1,464,410	-				+0.7
1,464,410	-				+0.1
1,464,420	+				+1.5
1,464,420	+				+0.1
1,464,421	-				+0.5
1,464,421	-				+1.1
1,464,421	-				+1.1
1,464,421	-				+0.8
1,464,534	+		Pf1N1B4_1284	0.12	+1.2
1,464,535	-		Pf1N1B4_1284	0.12	-0.4
1,464,535	-		Pf1N1B4_1284	0.12	-1.1
1,464,535	-		Pf1N1B4_1284	0.12	+1.6
1,464,535	-		Pf1N1B4_1284	0.12	-0.7
1,464,643	-		Pf1N1B4_1284	0.39	+0.7
1,464,664	+				-0.5
1,464,664	+		Pf1N1B4_1284	0.44	-0.6
1,464,665	-		Pf1N1B4_1284	0.44	-0.1
1,464,665	-		Pf1N1B4_1284	0.44	+0.7
1,464,747	+				-0.7
1,464,747	+		Pf1N1B4_1284	0.64	-0.4
1,464,747	+		Pf1N1B4_1284	0.64	+1.8
1,464,747	+		Pf1N1B4_1284	0.64	-0.5
1,464,747	+		Pf1N1B4_1284	0.64	+0.4
1,464,747	+		Pf1N1B4_1284	0.64	+0.3
1,464,748	-		Pf1N1B4_1284	0.65	+0.5
1,464,748	-		Pf1N1B4_1284	0.65	+0.3
1,464,748	-		Pf1N1B4_1284	0.65	-0.5
1,464,748	-		Pf1N1B4_1284	0.65	+0.3