Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03822

Experiment: PYE with Paraquat dichloride 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Paraquat dichloride 0.03 mg/ml
3,987,234	+				+1.0
3,987,289	+				+0.3
3,987,290	+				+0.7
3,987,307	+				-1.4
3,987,359	+				+0.1
3,987,385	-				-1.6
3,987,403	-				+0.3
3,987,410	+				-0.8
3,987,415	+				-0.1
3,987,428	-				+0.4
3,987,450	+		CCNA_03821	0.10	-0.6
3,987,451	+		CCNA_03821	0.10	-0.1
3,987,458	-		CCNA_03821	0.11	+1.6
3,987,458	-		CCNA_03821	0.11	-0.5
3,987,459	-		CCNA_03821	0.11	-3.2
3,987,474	-		CCNA_03821	0.13	+2.0
3,987,572	+		CCNA_03821	0.25	-1.4
3,987,604	+		CCNA_03821	0.29	+0.5
3,987,630	+		CCNA_03821	0.32	-1.6
3,987,658	-		CCNA_03821	0.36	-1.5
3,987,688	-		CCNA_03821	0.40	-2.7
3,987,706	+		CCNA_03821	0.42	-0.7
3,987,706	+		CCNA_03821	0.42	-1.1
3,987,708	+		CCNA_03821	0.42	-1.1
3,987,714	-		CCNA_03821	0.43	+0.7
3,987,714	-		CCNA_03821	0.43	+2.4
3,987,716	+		CCNA_03821	0.43	-1.0
3,987,767	-		CCNA_03821	0.49	+1.0
3,987,767	-		CCNA_03821	0.49	-0.2
3,987,767	-		CCNA_03821	0.49	+0.3
3,987,771	+		CCNA_03821	0.50	-0.1
3,987,782	+		CCNA_03821	0.51	-1.4
3,987,784	-		CCNA_03821	0.51	-0.9
3,987,788	+		CCNA_03821	0.52	+2.7
3,987,796	-		CCNA_03821	0.53	+1.6
3,987,796	-		CCNA_03821	0.53	-1.2
3,987,796	-		CCNA_03821	0.53	+0.9
3,987,818	+		CCNA_03821	0.56	+0.8
3,987,826	-		CCNA_03821	0.57	-0.5
3,987,826	-		CCNA_03821	0.57	-0.0
3,987,826	-		CCNA_03821	0.57	+1.3
3,987,831	-		CCNA_03821	0.57	-2.4
3,987,846	+		CCNA_03821	0.59	-2.5
3,987,880	+		CCNA_03821	0.63	-2.3
3,987,888	-		CCNA_03821	0.64	-0.0
3,987,888	-		CCNA_03821	0.64	+0.1
3,987,888	-		CCNA_03821	0.64	-0.2
3,987,912	-		CCNA_03821	0.67	+0.3
3,987,917	+		CCNA_03821	0.68	+0.3
3,987,917	+		CCNA_03821	0.68	+0.0
3,987,925	-		CCNA_03821	0.69	+0.5
3,987,942	-		CCNA_03821	0.71	+2.4
3,988,024	-		CCNA_03821	0.81	-0.8
3,988,035	-		CCNA_03821	0.83	-0.6
3,988,049	+		CCNA_03821	0.84	-0.8
3,988,049	+		CCNA_03821	0.84	-1.1
3,988,054	+		CCNA_03821	0.85	-1.2
3,988,054	+		CCNA_03821	0.85	+0.1
3,988,054	+		CCNA_03821	0.85	-1.8
3,988,062	-		CCNA_03821	0.86	-1.2
3,988,062	-		CCNA_03821	0.86	-2.1
3,988,062	-		CCNA_03821	0.86	-0.5
3,988,062	-		CCNA_03821	0.86	-0.5
3,988,062	-		CCNA_03821	0.86	-0.9
3,988,064	+		CCNA_03821	0.86	-1.8
3,988,067	-		CCNA_03821	0.86	-0.7
3,988,080	-		CCNA_03821	0.88	-1.5
3,988,085	-		CCNA_03821	0.89	-0.7
3,988,091	+		CCNA_03821	0.89	-0.1
3,988,118	+				-1.1
3,988,159	-				-0.6
3,988,159	-				-0.7
3,988,169	+				-0.2
3,988,171	-				+0.8
3,988,199	+				-0.9
3,988,199	-				-1.5
3,988,209	+				-0.3
3,988,217	-				-1.1
3,988,217	-				-2.8
3,988,217	-				-0.0
3,988,217	-				-2.1
3,988,236	-				-1.0
3,988,252	+				+2.2
3,988,254	-				-0.8
3,988,260	-				-1.5
3,988,260	-				+0.1
3,988,283	-		CCNA_03822	0.11	-0.4
3,988,306	-		CCNA_03822	0.14	-1.5
3,988,315	+		CCNA_03822	0.15	-2.5
3,988,323	-		CCNA_03822	0.16	+1.3
3,988,355	+		CCNA_03822	0.19	-0.7
3,988,363	-		CCNA_03822	0.20	-1.6
3,988,363	-		CCNA_03822	0.20	-1.1
3,988,437	+		CCNA_03822	0.29	-0.2
3,988,447	+		CCNA_03822	0.30	-0.7
3,988,473	+		CCNA_03822	0.33	+0.1
3,988,473	+		CCNA_03822	0.33	-1.8
3,988,654	+		CCNA_03822	0.54	+0.8
3,988,654	+		CCNA_03822	0.54	-0.7
3,988,662	-		CCNA_03822	0.55	+2.1
3,988,662	-		CCNA_03822	0.55	+0.5
3,988,664	+		CCNA_03822	0.55	-0.7
3,988,672	-		CCNA_03822	0.56	-1.6
3,988,673	+		CCNA_03822	0.56	+0.7
3,988,706	-		CCNA_03822	0.60	+0.5
3,988,721	-		CCNA_03822	0.62	-0.2
3,988,728	-		CCNA_03822	0.62	+0.8
3,988,738	-		CCNA_03822	0.64	-1.0
3,988,830	-		CCNA_03822	0.74	-0.2
3,988,830	-		CCNA_03822	0.74	+1.4
3,988,842	-		CCNA_03822	0.76	-0.0
3,988,865	+		CCNA_03822	0.78	-1.7
3,988,870	+		CCNA_03822	0.79	+0.9
3,988,923	-		CCNA_03822	0.85	-1.4
3,988,938	+		CCNA_03822	0.87	+1.4
3,988,950	+		CCNA_03822	0.88	-0.5
3,988,955	+		CCNA_03822	0.89	+0.1
3,988,958	-		CCNA_03822	0.89	-0.5
3,988,980	+				-1.8
3,988,984	-				-0.7
3,989,005	+				+1.4
3,989,033	-				-1.0
3,989,034	-				+1.4
3,989,082	+				+0.9
3,989,121	+				-2.0
3,989,129	-				+0.5
3,989,877	+				+1.9
3,989,887	+				-0.2
3,989,887	+				+1.1
3,989,887	+				+0.2
3,989,887	+				+0.5
3,989,887	+				+1.0
3,989,895	-				-0.8
3,989,905	+				-0.9
3,989,936	+				+3.3
3,989,942	+				+2.8
3,989,950	-				-0.7
3,989,966	-				+1.6
3,990,020	+				+3.1
3,990,036	-				-1.1
3,990,036	-				+1.9